Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 Y_RNA.59-201ENST00000362828 102 ntBASIC-3.74□□□□□ -3.01
CXCL1P09341 RNU6-68P-201ENST00000516576 104 ntBASIC-3.74□□□□□ -3.01
CXCL1P09341 Y_RNA.812-201ENST00000610788 101 ntBASIC-3.74□□□□□ -3.01
CXCL1P09341 Y_RNA.784-201ENST00000613803 101 ntBASIC-3.74□□□□□ -3.01
CXCL1P09341 Y_RNA.787-201ENST00000616522 101 ntBASIC-3.74□□□□□ -3.01
CXCL1P09341 Y_RNA.780-201ENST00000617336 101 ntBASIC-3.74□□□□□ -3.01
CXCL1P09341 Y_RNA.801-201ENST00000619005 101 ntBASIC-3.74□□□□□ -3.01
CXCL1P09341 RNU6-912P-201ENST00000363800 104 ntBASIC-3.75□□□□□ -3.01
CXCL1P09341 Y_RNA.566-201ENST00000384735 101 ntBASIC-3.75□□□□□ -3.01
CXCL1P09341 AP001318.4-201ENST00000616637 121 ntBASIC-3.75□□□□□ -3.01
CXCL1P09341 SNORD116-24-201ENST00000384549 92 ntBASIC-3.76□□□□□ -3.01
CXCL1P09341 RNU6-542P-201ENST00000516405 103 ntBASIC-3.76□□□□□ -3.01
CXCL1P09341 RNU6-1121P-201ENST00000516802 109 ntBASIC-3.76□□□□□ -3.01
CXCL1P09341 RNU6-176P-201ENST00000517196 105 ntBASIC-3.76□□□□□ -3.01
CXCL1P09341 RNU6-810P-201ENST00000364001 107 ntBASIC-3.77□□□□□ -3.01
CXCL1P09341 SNORD116-14-201ENST00000383894 92 ntBASIC-3.77□□□□□ -3.01
CXCL1P09341 SNORD116-17-201ENST00000383929 92 ntBASIC-3.77□□□□□ -3.01
CXCL1P09341 RNU6-886P-201ENST00000384319 105 ntBASIC-3.77□□□□□ -3.01
CXCL1P09341 SNORD116-15-201ENST00000384445 92 ntBASIC-3.77□□□□□ -3.01
CXCL1P09341 SNORD116-19-201ENST00000384729 92 ntBASIC-3.77□□□□□ -3.01
CXCL1P09341 MIR548AJ2-201ENST00000408539 92 ntBASIC-3.77□□□□□ -3.01
CXCL1P09341 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-3.78□□□□□ -3.01
CXCL1P09341 TMSB4XP3-201ENST00000445144 114 ntBASIC-3.78□□□□□ -3.01
CXCL1P09341 RNU6-267P-201ENST00000516714 103 ntBASIC-3.78□□□□□ -3.01
CXCL1P09341 MIR664A-201ENST00000626086 82 ntBASIC-3.78□□□□□ -3.01
CXCL1P09341 SNORD45.2-201ENST00000363552 72 ntBASIC-3.79□□□□□ -3.02
CXCL1P09341 Y_RNA.611-201ENST00000410682 108 ntBASIC-3.79□□□□□ -3.02
CXCL1P09341 MIR548AI-201ENST00000579940 88 ntBASIC-3.79□□□□□ -3.02
CXCL1P09341 MIRLET7A2-201ENST00000362105 72 ntBASIC-3.8□□□□□ -3.02
CXCL1P09341 RNU6-315P-201ENST00000362666 107 ntBASIC-3.8□□□□□ -3.02
CXCL1P09341 RNU6-379P-201ENST00000363813 104 ntBASIC-3.8□□□□□ -3.02
CXCL1P09341 RNU6-530P-201ENST00000391180 107 ntBASIC-3.8□□□□□ -3.02
CXCL1P09341 RNU6-231P-201ENST00000517122 103 ntBASIC-3.8□□□□□ -3.02
CXCL1P09341 AC006160.2-201ENST00000637708 154 ntBASIC-3.8□□□□□ -3.02
CXCL1P09341 RNU6-196P-201ENST00000384315 107 ntBASIC-3.81□□□□□ -3.02
CXCL1P09341 RNU6-895P-201ENST00000384125 103 ntBASIC-3.82□□□□□ -3.02
CXCL1P09341 MIR4426-201ENST00000640330 63 ntBASIC-3.82□□□□□ -3.02
CXCL1P09341 SNORA63-201ENST00000363450 132 ntBASIC-3.83□□□□□ -3.02
CXCL1P09341 Y_RNA.273-201ENST00000364703 102 ntBASIC-3.83□□□□□ -3.02
CXCL1P09341 RNY1P5-201ENST00000383890 115 ntBASIC-3.83□□□□□ -3.02
CXCL1P09341 RNU6-1241P-201ENST00000384536 107 ntBASIC-3.83□□□□□ -3.02
CXCL1P09341 SNORD60.1-201ENST00000362451 73 ntBASIC-3.84□□□□□ -3.02
CXCL1P09341 RNU6-797P-201ENST00000363101 109 ntBASIC-3.84□□□□□ -3.02
CXCL1P09341 RNU6-590P-201ENST00000365039 107 ntBASIC-3.84□□□□□ -3.02
CXCL1P09341 RNU6-1296P-201ENST00000383879 107 ntBASIC-3.85□□□□□ -3.03
CXCL1P09341 SNORA40B-201ENST00000385573 128 ntBASIC-3.85□□□□□ -3.03
CXCL1P09341 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-3.85□□□□□ -3.03
CXCL1P09341 RNU6-300P-201ENST00000459080 104 ntBASIC-3.85□□□□□ -3.03
CXCL1P09341 Y_RNA.604-201ENST00000410574 102 ntBASIC-3.86□□□□□ -3.03
CXCL1P09341 RNU6-1047P-201ENST00000364418 107 ntBASIC-3.87□□□□□ -3.03
CXCL1P09341 MIR154-201ENST00000385243 84 ntBASIC-3.87□□□□□ -3.03
CXCL1P09341 SNORD116.2-201ENST00000391251 93 ntBASIC-3.87□□□□□ -3.03
CXCL1P09341 RNU6-388P-201ENST00000517012 105 ntBASIC-3.87□□□□□ -3.03
CXCL1P09341 RNU6-389P-201ENST00000517048 105 ntBASIC-3.87□□□□□ -3.03
CXCL1P09341 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-3.87□□□□□ -3.03
CXCL1P09341 RNU6-675P-201ENST00000384236 104 ntBASIC-3.88□□□□□ -3.03
CXCL1P09341 AL117351.2-201ENST00000513571 157 ntBASIC-3.88□□□□□ -3.03
CXCL1P09341 RNU6-1212P-201ENST00000517023 104 ntBASIC-3.88□□□□□ -3.03
CXCL1P09341 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-3.88□□□□□ -3.03
CXCL1P09341 MALAT1.1-201ENST00000618249 95 ntBASIC-3.88□□□□□ -3.03
CXCL1P09341 Y_RNA.506-201ENST00000384494 102 ntBASIC-3.89□□□□□ -3.03
CXCL1P09341 AL451105.1-201ENST00000450005 189 ntBASIC-3.89□□□□□ -3.03
CXCL1P09341 Y_RNA.464-201ENST00000384282 110 ntBASIC-3.9□□□□□ -3.03
CXCL1P09341 RNU6-907P-201ENST00000390924 102 ntBASIC-3.9□□□□□ -3.03
CXCL1P09341 MIR5693-201ENST00000577722 73 ntBASIC-3.9□□□□□ -3.03
CXCL1P09341 Y_RNA.607-201ENST00000410597 98 ntBASIC-3.91□□□□□ -3.04
CXCL1P09341 RNU6-346P-201ENST00000516288 111 ntBASIC-3.91□□□□□ -3.04
CXCL1P09341 RNU6-345P-201ENST00000517001 107 ntBASIC-3.91□□□□□ -3.04
CXCL1P09341 Y_RNA.434-201ENST00000384090 100 ntBASIC-3.93□□□□□ -3.04
CXCL1P09341 RNU6-327P-201ENST00000516270 127 ntBASIC-3.93□□□□□ -3.04
CXCL1P09341 AL731768.1-201ENST00000603124 139 ntBASIC-3.93□□□□□ -3.04
CXCL1P09341 RNU6-867P-201ENST00000364956 107 ntBASIC-3.95□□□□□ -3.04
CXCL1P09341 MT-TG-201ENST00000387429 68 ntBASIC-3.95□□□□□ -3.04
CXCL1P09341 RNU6-70P-201ENST00000516438 60 ntBASIC-3.95□□□□□ -3.04
CXCL1P09341 MIR1254-1-201ENST00000408257 97 ntBASIC-3.96□□□□□ -3.04
CXCL1P09341 Y_RNA.830-201ENST00000628531 96 ntBASIC-3.96□□□□□ -3.04
CXCL1P09341 Y_RNA.320-201ENST00000365144 102 ntBASIC-3.97□□□□□ -3.04
CXCL1P09341 SNORA40.13-201ENST00000516379 120 ntBASIC-3.97□□□□□ -3.04
CXCL1P09341 RNU6-589P-201ENST00000516485 107 ntBASIC-3.98□□□□□ -3.05
CXCL1P09341 SNORA40.16-201ENST00000517238 121 ntBASIC-3.98□□□□□ -3.05
CXCL1P09341 RNU6-463P-201ENST00000384340 107 ntBASIC-3.99□□□□□ -3.05
CXCL1P09341 RNU7-119P-201ENST00000459279 63 ntBASIC-3.99□□□□□ -3.05
CXCL1P09341 Y_RNA.511-201ENST00000384514 103 ntBASIC-4□□□□□ -3.05
CXCL1P09341 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-4□□□□□ -3.05
CXCL1P09341 RNY4P25-201ENST00000459254 96 ntBASIC-4□□□□□ -3.05
CXCL1P09341 RNU6-1045P-201ENST00000516321 107 ntBASIC-4.01□□□□□ -3.05
CXCL1P09341 Y_RNA.17-201ENST00000362433 111 ntBASIC-4.02□□□□□ -3.05
CXCL1P09341 Y_RNA.134-201ENST00000363435 105 ntBASIC-4.02□□□□□ -3.05
CXCL1P09341 RNU6-1277P-201ENST00000364561 107 ntBASIC-4.02□□□□□ -3.05
CXCL1P09341 RNU6-1124P-201ENST00000384169 107 ntBASIC-4.02□□□□□ -3.05
CXCL1P09341 AL031737.1-201ENST00000450125 223 ntBASIC-4.02□□□□□ -3.05
CXCL1P09341 RNU6-255P-201ENST00000516957 105 ntBASIC-4.02□□□□□ -3.05
CXCL1P09341 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-4.02□□□□□ -3.05
CXCL1P09341 RNU6-122P-201ENST00000516818 107 ntBASIC-4.03□□□□□ -3.05
CXCL1P09341 Y_RNA.79-201ENST00000362992 113 ntBASIC-4.04□□□□□ -3.06
CXCL1P09341 Y_RNA.316-201ENST00000365118 111 ntBASIC-4.04□□□□□ -3.06
CXCL1P09341 RNU6-844P-201ENST00000517175 102 ntBASIC-4.05□□□□□ -3.06
CXCL1P09341 RNU6-800P-201ENST00000384473 103 ntBASIC-4.06□□□□□ -3.06
CXCL1P09341 RNU6-987P-201ENST00000384759 104 ntBASIC-4.06□□□□□ -3.06
CXCL1P09341 MIR509-1-201ENST00000385265 94 ntBASIC-4.06□□□□□ -3.06
Retrieved 100 of 98,524 protein–RNA pairs in 1426.5 ms