Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.61□□□□□ -2.67
CLSTN1O94985 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.61□□□□□ -2.67
CLSTN1O94985 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.61□□□□□ -2.67
CLSTN1O94985 MIR23C-201ENST00000579846 100 ntBASIC-1.61□□□□□ -2.67
CLSTN1O94985 SNORD116-16-201ENST00000384533 92 ntBASIC-1.63□□□□□ -2.67
CLSTN1O94985 RNU6-663P-201ENST00000391105 106 ntBASIC-1.63□□□□□ -2.67
CLSTN1O94985 RNU6-542P-201ENST00000516405 103 ntBASIC-1.63□□□□□ -2.67
CLSTN1O94985 U2.18-201ENST00000622185 84 ntBASIC-1.63□□□□□ -2.67
CLSTN1O94985 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.64□□□□□ -2.67
CLSTN1O94985 RNU6-695P-201ENST00000391157 104 ntBASIC-1.64□□□□□ -2.67
CLSTN1O94985 MIR487B-201ENST00000385021 84 ntBASIC-1.65□□□□□ -2.67
CLSTN1O94985 MIR3170-201ENST00000582699 77 ntBASIC-1.65□□□□□ -2.67
CLSTN1O94985 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.66□□□□□ -2.68
CLSTN1O94985 SNX3P1X-201ENST00000414887 175 ntBASIC-1.66□□□□□ -2.68
CLSTN1O94985 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.67□□□□□ -2.68
CLSTN1O94985 SNORD18.1-201ENST00000363807 70 ntBASIC-1.68□□□□□ -2.68
CLSTN1O94985 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.68□□□□□ -2.68
CLSTN1O94985 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.68□□□□□ -2.68
CLSTN1O94985 AC120024.2-201ENST00000576526 175 ntBASIC-1.68□□□□□ -2.68
CLSTN1O94985 MIR1246-201ENST00000636535 73 ntBASIC-1.68□□□□□ -2.68
CLSTN1O94985 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.69□□□□□ -2.68
CLSTN1O94985 RNU6-563P-201ENST00000364872 108 ntBASIC-1.69□□□□□ -2.68
CLSTN1O94985 RNA5SP331-201ENST00000364986 107 ntBASIC-1.69□□□□□ -2.68
CLSTN1O94985 MIR548AA1-201ENST00000384971 97 ntBASIC-1.69□□□□□ -2.68
CLSTN1O94985 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.69□□□□□ -2.68
CLSTN1O94985 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.69□□□□□ -2.68
CLSTN1O94985 SNORD30.1-201ENST00000391309 70 ntBASIC-1.69□□□□□ -2.68
CLSTN1O94985 MIR1285-2-201ENST00000408311 88 ntBASIC-1.69□□□□□ -2.68
CLSTN1O94985 RNU6-841P-201ENST00000383872 107 ntBASIC-1.71□□□□□ -2.68
CLSTN1O94985 RNU6-258P-201ENST00000390884 101 ntBASIC-1.71□□□□□ -2.68
CLSTN1O94985 MIR3123-201ENST00000583417 75 ntBASIC-1.71□□□□□ -2.68
CLSTN1O94985 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.71□□□□□ -2.68
CLSTN1O94985 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.71□□□□□ -2.68
CLSTN1O94985 MIR601-201ENST00000385256 79 ntBASIC-1.72□□□□□ -2.68
CLSTN1O94985 AC108019.1-201ENST00000512540 175 ntBASIC-1.72□□□□□ -2.68
CLSTN1O94985 SNORD1B-201ENST00000363091 84 ntBASIC-1.73□□□□□ -2.69
CLSTN1O94985 RNU6-871P-201ENST00000516122 100 ntBASIC-1.73□□□□□ -2.69
CLSTN1O94985 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.73□□□□□ -2.69
CLSTN1O94985 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.73□□□□□ -2.69
CLSTN1O94985 MIR198-201ENST00000637333 62 ntBASIC-1.73□□□□□ -2.69
CLSTN1O94985 AL627230.5-201ENST00000619807 58 ntBASIC-1.74□□□□□ -2.69
CLSTN1O94985 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.75□□□□□ -2.69
CLSTN1O94985 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.75□□□□□ -2.69
CLSTN1O94985 RNU6-983P-201ENST00000516004 103 ntBASIC-1.75□□□□□ -2.69
CLSTN1O94985 RNU6-92P-201ENST00000605893 104 ntBASIC-1.75□□□□□ -2.69
CLSTN1O94985 MIR365A-201ENST00000362260 87 ntBASIC-1.76□□□□□ -2.69
CLSTN1O94985 MIR548AM-201ENST00000584298 74 ntBASIC-1.76□□□□□ -2.69
CLSTN1O94985 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.77□□□□□ -2.69
CLSTN1O94985 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.77□□□□□ -2.69
CLSTN1O94985 MIR4441-201ENST00000582623 100 ntBASIC-1.77□□□□□ -2.69
CLSTN1O94985 RNU6-247P-201ENST00000362636 107 ntBASIC-1.78□□□□□ -2.69
CLSTN1O94985 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.79□□□□□ -2.7
CLSTN1O94985 Y_RNA.565-201ENST00000384719 101 ntBASIC-1.79□□□□□ -2.7
CLSTN1O94985 MIR4662A-201ENST00000637499 67 ntBASIC-1.79□□□□□ -2.7
CLSTN1O94985 SNORA27.2-201ENST00000363365 126 ntBASIC-1.8□□□□□ -2.7
CLSTN1O94985 RNU6-776P-201ENST00000364403 104 ntBASIC-1.8□□□□□ -2.7
CLSTN1O94985 RNU6-1022P-201ENST00000365049 104 ntBASIC-1.8□□□□□ -2.7
CLSTN1O94985 RNU6-649P-201ENST00000384463 107 ntBASIC-1.8□□□□□ -2.7
CLSTN1O94985 Y_RNA.685-201ENST00000516532 108 ntBASIC-1.8□□□□□ -2.7
CLSTN1O94985 RNU7-151P-201ENST00000516930 53 ntBASIC-1.8□□□□□ -2.7
CLSTN1O94985 MIR4756-201ENST00000577874 78 ntBASIC-1.8□□□□□ -2.7
CLSTN1O94985 AC005520.4-201ENST00000604337 90 ntBASIC-1.8□□□□□ -2.7
CLSTN1O94985 MIR664B-201ENST00000626756 61 ntBASIC-1.8□□□□□ -2.7
CLSTN1O94985 MIR125B1-201ENST00000385236 88 ntBASIC-1.81□□□□□ -2.7
CLSTN1O94985 AC013734.1-201ENST00000619329 111 ntBASIC-1.81□□□□□ -2.7
CLSTN1O94985 MIR7978-201ENST00000636158 59 ntBASIC-1.81□□□□□ -2.7
CLSTN1O94985 SNORA25.4-201ENST00000363666 124 ntBASIC-1.82□□□□□ -2.7
CLSTN1O94985 RNU6-669P-201ENST00000365575 107 ntBASIC-1.82□□□□□ -2.7
CLSTN1O94985 RNU6-995P-201ENST00000391244 107 ntBASIC-1.83□□□□□ -2.7
CLSTN1O94985 SNORD63.2-201ENST00000516303 64 ntBASIC-1.83□□□□□ -2.7
CLSTN1O94985 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.84□□□□□ -2.7
CLSTN1O94985 SNORD60.1-201ENST00000362451 73 ntBASIC-1.85□□□□□ -2.71
CLSTN1O94985 RNU6-172P-201ENST00000411000 93 ntBASIC-1.85□□□□□ -2.71
CLSTN1O94985 MIR579-201ENST00000385221 98 ntBASIC-1.86□□□□□ -2.71
CLSTN1O94985 MIR1468-201ENST00000410600 86 ntBASIC-1.86□□□□□ -2.71
CLSTN1O94985 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.86□□□□□ -2.71
CLSTN1O94985 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.86□□□□□ -2.71
CLSTN1O94985 U6.111-201ENST00000636093 83 ntBASIC-1.87□□□□□ -2.71
CLSTN1O94985 RNU4-88P-201ENST00000411220 86 ntBASIC-1.88□□□□□ -2.71
CLSTN1O94985 RNY3P8-201ENST00000411366 126 ntBASIC-1.88□□□□□ -2.71
CLSTN1O94985 RNU6-980P-201ENST00000516925 103 ntBASIC-1.88□□□□□ -2.71
CLSTN1O94985 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.89□□□□□ -2.71
CLSTN1O94985 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.9□□□□□ -2.71
CLSTN1O94985 RNU6-539P-201ENST00000516665 103 ntBASIC-1.9□□□□□ -2.71
CLSTN1O94985 U6.97-201ENST00000636904 101 ntBASIC-1.9□□□□□ -2.71
CLSTN1O94985 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.91□□□□□ -2.72
CLSTN1O94985 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.91□□□□□ -2.72
CLSTN1O94985 RNU6-974P-201ENST00000384099 108 ntBASIC-1.91□□□□□ -2.72
CLSTN1O94985 MIR548W-201ENST00000581970 74 ntBASIC-1.91□□□□□ -2.72
CLSTN1O94985 SNORA25.5-201ENST00000363782 126 ntBASIC-1.92□□□□□ -2.72
CLSTN1O94985 RNU6-1275P-201ENST00000391087 107 ntBASIC-1.92□□□□□ -2.72
CLSTN1O94985 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.92□□□□□ -2.72
CLSTN1O94985 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.93□□□□□ -2.72
CLSTN1O94985 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.93□□□□□ -2.72
CLSTN1O94985 snoU13.10-201ENST00000459301 103 ntBASIC-1.93□□□□□ -2.72
CLSTN1O94985 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.93□□□□□ -2.72
CLSTN1O94985 RNU7-160P-201ENST00000516660 62 ntBASIC-1.93□□□□□ -2.72
CLSTN1O94985 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.93□□□□□ -2.72
CLSTN1O94985 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.93□□□□□ -2.72
CLSTN1O94985 U4.2-201ENST00000618561 85 ntBASIC-1.93□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms