Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 Y_RNA.321-201ENST00000365149 102 ntBASIC-0.05□□□□□ -2.42
SOX1O00570 SNORD63.2-201ENST00000516303 64 ntBASIC-0.05□□□□□ -2.42
SOX1O00570 MIR4436A-201ENST00000585278 85 ntBASIC-0.05□□□□□ -2.42
SOX1O00570 MTRNR2L9-201ENST00000622562 75 ntBASIC-0.05□□□□□ -2.42
SOX1O00570 RNU6-930P-201ENST00000390938 100 ntBASIC-0.06□□□□□ -2.42
SOX1O00570 SNORD22.1-201ENST00000516331 125 ntBASIC-0.06□□□□□ -2.42
SOX1O00570 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.06□□□□□ -2.42
SOX1O00570 MIR204-201ENST00000385200 110 ntBASIC-0.07□□□□□ -2.42
SOX1O00570 SNORA26.4-201ENST00000391188 123 ntBASIC-0.07□□□□□ -2.42
SOX1O00570 SNORD75.1-201ENST00000408373 60 ntBASIC-0.07□□□□□ -2.42
SOX1O00570 SNORD4A-201ENST00000459174 72 ntBASIC-0.07□□□□□ -2.42
SOX1O00570 MIR198-201ENST00000637333 62 ntBASIC-0.07□□□□□ -2.42
SOX1O00570 RNU6-838P-201ENST00000363399 108 ntBASIC-0.08□□□□□ -2.42
SOX1O00570 SNORD114-11-201ENST00000363738 75 ntBASIC-0.08□□□□□ -2.42
SOX1O00570 RNU6-974P-201ENST00000384099 108 ntBASIC-0.08□□□□□ -2.42
SOX1O00570 SNORA13-201ENST00000458790 133 ntBASIC-0.08□□□□□ -2.42
SOX1O00570 RNA5SP169-201ENST00000517268 117 ntBASIC-0.08□□□□□ -2.42
SOX1O00570 SNORD115-33-201ENST00000363723 82 ntBASIC-0.09□□□□□ -2.42
SOX1O00570 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.09□□□□□ -2.42
SOX1O00570 MIR196A2-201ENST00000385189 110 ntBASIC-0.11□□□□□ -2.43
SOX1O00570 AL353691.2-201ENST00000443795 59 ntBASIC-0.11□□□□□ -2.43
SOX1O00570 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.11□□□□□ -2.43
SOX1O00570 DLEU2_4.2-201ENST00000616613 58 ntBASIC-0.11□□□□□ -2.43
SOX1O00570 MIR4788-201ENST00000639104 80 ntBASIC-0.11□□□□□ -2.43
SOX1O00570 RNA5SP300-201ENST00000391197 107 ntBASIC-0.12□□□□□ -2.43
SOX1O00570 MIR601-201ENST00000385256 79 ntBASIC-0.13□□□□□ -2.43
SOX1O00570 AL500527.2-201ENST00000454105 95 ntBASIC-0.13□□□□□ -2.43
SOX1O00570 Y_RNA.699-201ENST00000516803 93 ntBASIC-0.13□□□□□ -2.43
SOX1O00570 MIR3179-1-201ENST00000578940 84 ntBASIC-0.13□□□□□ -2.43
SOX1O00570 MIR3179-2-201ENST00000579107 84 ntBASIC-0.13□□□□□ -2.43
SOX1O00570 MIR3179-3-201ENST00000579566 84 ntBASIC-0.13□□□□□ -2.43
SOX1O00570 MIR3179-4-201ENST00000617599 84 ntBASIC-0.13□□□□□ -2.43
SOX1O00570 MIR5683-201ENST00000636514 76 ntBASIC-0.13□□□□□ -2.43
SOX1O00570 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.14□□□□□ -2.43
SOX1O00570 RNA5SP461-201ENST00000516451 104 ntBASIC-0.14□□□□□ -2.43
SOX1O00570 SNORA27.2-201ENST00000363365 126 ntBASIC-0.15□□□□□ -2.43
SOX1O00570 MIR520D-201ENST00000385002 87 ntBASIC-0.15□□□□□ -2.43
SOX1O00570 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.15□□□□□ -2.43
SOX1O00570 MIR548F3-201ENST00000408509 87 ntBASIC-0.15□□□□□ -2.43
SOX1O00570 RNU4-63P-201ENST00000411313 118 ntBASIC-0.15□□□□□ -2.43
SOX1O00570 U4.2-201ENST00000618561 85 ntBASIC-0.15□□□□□ -2.43
SOX1O00570 RNA5SP275-201ENST00000363936 118 ntBASIC-0.16□□□□□ -2.44
SOX1O00570 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.16□□□□□ -2.44
SOX1O00570 AP000533.3-201ENST00000447704 118 ntBASIC-0.16□□□□□ -2.44
SOX1O00570 RNU6-320P-201ENST00000516511 106 ntBASIC-0.16□□□□□ -2.44
SOX1O00570 AP002795.1-201ENST00000534879 84 ntBASIC-0.16□□□□□ -2.44
SOX1O00570 MIR548AZ-201ENST00000616567 95 ntBASIC-0.16□□□□□ -2.44
SOX1O00570 SNORD114-17-201ENST00000364699 75 ntBASIC-0.18□□□□□ -2.44
SOX1O00570 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.18□□□□□ -2.44
SOX1O00570 MIR8485-201ENST00000401372 91 ntBASIC-0.18□□□□□ -2.44
SOX1O00570 RNU7-134P-201ENST00000458997 64 ntBASIC-0.18□□□□□ -2.44
SOX1O00570 RNU6-226P-201ENST00000363778 107 ntBASIC-0.19□□□□□ -2.44
SOX1O00570 RNU6-258P-201ENST00000390884 101 ntBASIC-0.19□□□□□ -2.44
SOX1O00570 MIR548AL-201ENST00000578416 97 ntBASIC-0.19□□□□□ -2.44
SOX1O00570 SNORD114-25-201ENST00000363742 72 ntBASIC-0.2□□□□□ -2.44
SOX1O00570 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.2□□□□□ -2.44
SOX1O00570 MIR1207-201ENST00000408249 87 ntBASIC-0.2□□□□□ -2.44
SOX1O00570 MIR29B1-201ENST00000385015 81 ntBASIC-0.21□□□□□ -2.44
SOX1O00570 MIR196A1-201ENST00000388006 70 ntBASIC-0.21□□□□□ -2.44
SOX1O00570 MIR4324-201ENST00000584846 72 ntBASIC-0.21□□□□□ -2.44
SOX1O00570 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.22□□□□□ -2.44
SOX1O00570 RNU6-530P-201ENST00000391180 107 ntBASIC-0.22□□□□□ -2.44
SOX1O00570 RNU6-721P-201ENST00000410155 105 ntBASIC-0.22□□□□□ -2.44
SOX1O00570 RNU6-284P-201ENST00000411105 106 ntBASIC-0.22□□□□□ -2.44
SOX1O00570 SNORD126-201ENST00000459475 77 ntBASIC-0.22□□□□□ -2.44
SOX1O00570 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.25□□□□□ -2.45
SOX1O00570 SNORA3B-201ENST00000391305 131 ntBASIC-0.25□□□□□ -2.45
SOX1O00570 RNU6-608P-201ENST00000383927 104 ntBASIC-0.26□□□□□ -2.45
SOX1O00570 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.26□□□□□ -2.45
SOX1O00570 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.26□□□□□ -2.45
SOX1O00570 AC021146.6-201ENST00000514659 117 ntBASIC-0.26□□□□□ -2.45
SOX1O00570 MIR378F-201ENST00000578143 78 ntBASIC-0.26□□□□□ -2.45
SOX1O00570 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.26□□□□□ -2.45
SOX1O00570 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.26□□□□□ -2.45
SOX1O00570 Y_RNA.442-201ENST00000384131 102 ntBASIC-0.27□□□□□ -2.45
SOX1O00570 SNORA32.3-201ENST00000384772 121 ntBASIC-0.27□□□□□ -2.45
SOX1O00570 MIR4499-201ENST00000584834 69 ntBASIC-0.27□□□□□ -2.45
SOX1O00570 MIR6738-201ENST00000619620 64 ntBASIC-0.27□□□□□ -2.45
SOX1O00570 RNU6-10P-201ENST00000384036 107 ntBASIC-0.28□□□□□ -2.45
SOX1O00570 MT-TQ-201ENST00000387372 72 ntBASIC-0.28□□□□□ -2.45
SOX1O00570 MIR3115-201ENST00000577915 68 ntBASIC-0.28□□□□□ -2.45
SOX1O00570 SCARNA17-201ENST00000516183 144 ntBASIC-0.29□□□□□ -2.46
SOX1O00570 RNU6-431P-201ENST00000383874 107 ntBASIC-0.3□□□□□ -2.46
SOX1O00570 MIR545-201ENST00000385085 106 ntBASIC-0.3□□□□□ -2.46
SOX1O00570 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.3□□□□□ -2.46
SOX1O00570 MIR4320-201ENST00000636981 65 ntBASIC-0.3□□□□□ -2.46
SOX1O00570 SNORD64-201ENST00000386683 67 ntBASIC-0.31□□□□□ -2.46
SOX1O00570 uc_338.19-201ENST00000616808 99 ntBASIC-0.31□□□□□ -2.46
SOX1O00570 RNU6-1204P-201ENST00000363948 107 ntBASIC-0.32□□□□□ -2.46
SOX1O00570 SNORD14C-201ENST00000365382 88 ntBASIC-0.33□□□□□ -2.46
SOX1O00570 MIR507-201ENST00000385234 94 ntBASIC-0.33□□□□□ -2.46
SOX1O00570 Y_RNA.284-201ENST00000364806 102 ntBASIC-0.34□□□□□ -2.46
SOX1O00570 RNU6-742P-201ENST00000365289 107 ntBASIC-0.34□□□□□ -2.46
SOX1O00570 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.34□□□□□ -2.46
SOX1O00570 MIR487B-201ENST00000385021 84 ntBASIC-0.34□□□□□ -2.46
SOX1O00570 SNORD83B-201ENST00000386745 93 ntBASIC-0.34□□□□□ -2.46
SOX1O00570 MIR587-201ENST00000384845 96 ntBASIC-0.35□□□□□ -2.47
SOX1O00570 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.36□□□□□ -2.47
SOX1O00570 SNORD114-3-201ENST00000364969 75 ntBASIC-0.36□□□□□ -2.47
SOX1O00570 RNU6-361P-201ENST00000364454 107 ntBASIC-0.37□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 179.6 ms