Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 RNU6-871P-201ENST00000516122 100 ntBASIC-1.48□□□□□ -2.65
O00370 MIR3170-201ENST00000582699 77 ntBASIC-1.48□□□□□ -2.65
O00370 RNU6-164P-201ENST00000364604 103 ntBASIC-1.49□□□□□ -2.65
O00370 SNORD78.1-201ENST00000390866 65 ntBASIC-1.49□□□□□ -2.65
O00370 RNU7-151P-201ENST00000516930 53 ntBASIC-1.49□□□□□ -2.65
O00370 MIR365A-201ENST00000362260 87 ntBASIC-1.5□□□□□ -2.65
O00370 SNORD114-3-201ENST00000364969 75 ntBASIC-1.5□□□□□ -2.65
O00370 RNU6-608P-201ENST00000383927 104 ntBASIC-1.5□□□□□ -2.65
O00370 RNU6-279P-201ENST00000391297 101 ntBASIC-1.5□□□□□ -2.65
O00370 MIR6874-201ENST00000635894 71 ntBASIC-1.5□□□□□ -2.65
O00370 MIR1207-201ENST00000408249 87 ntBASIC-1.51□□□□□ -2.65
O00370 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.51□□□□□ -2.65
O00370 AC018880.2-201ENST00000414265 201 ntBASIC-1.52□□□□□ -2.65
O00370 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.52□□□□□ -2.65
O00370 AC091912.2-201ENST00000624798 167 ntBASIC-1.52□□□□□ -2.65
O00370 MIR8485-201ENST00000401372 91 ntBASIC-1.53□□□□□ -2.65
O00370 RNA5SP180-201ENST00000516181 101 ntBASIC-1.53□□□□□ -2.65
O00370 SNORD60.1-201ENST00000362451 73 ntBASIC-1.54□□□□□ -2.66
O00370 SNORA25.4-201ENST00000363666 124 ntBASIC-1.54□□□□□ -2.66
O00370 MIR1302-4-201ENST00000408701 150 ntBASIC-1.54□□□□□ -2.66
O00370 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.54□□□□□ -2.66
O00370 MIR4679-1-201ENST00000637619 75 ntBASIC-1.54□□□□□ -2.66
O00370 RNU6-649P-201ENST00000384463 107 ntBASIC-1.55□□□□□ -2.66
O00370 SNORD63.2-201ENST00000516303 64 ntBASIC-1.55□□□□□ -2.66
O00370 RNU6-706P-201ENST00000517229 104 ntBASIC-1.55□□□□□ -2.66
O00370 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.56□□□□□ -2.66
O00370 MIR1285-2-201ENST00000408311 88 ntBASIC-1.56□□□□□ -2.66
O00370 MIR4441-201ENST00000582623 100 ntBASIC-1.56□□□□□ -2.66
O00370 RNA5SP461-201ENST00000516451 104 ntBASIC-1.57□□□□□ -2.66
O00370 RNU6-523P-201ENST00000516304 54 ntBASIC-1.58□□□□□ -2.66
O00370 SNORD116.2-201ENST00000391251 93 ntBASIC-1.59□□□□□ -2.66
O00370 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.59□□□□□ -2.66
O00370 Y_RNA.565-201ENST00000384719 101 ntBASIC-1.6□□□□□ -2.67
O00370 SNORA25.5-201ENST00000363782 126 ntBASIC-1.61□□□□□ -2.67
O00370 RNU6-258P-201ENST00000390884 101 ntBASIC-1.61□□□□□ -2.67
O00370 MIR7110-201ENST00000612638 86 ntBASIC-1.61□□□□□ -2.67
O00370 U6.111-201ENST00000636093 83 ntBASIC-1.61□□□□□ -2.67
O00370 MIR7978-201ENST00000636158 59 ntBASIC-1.61□□□□□ -2.67
O00370 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.62□□□□□ -2.67
O00370 RNU6-669P-201ENST00000365575 107 ntBASIC-1.62□□□□□ -2.67
O00370 AC005520.4-201ENST00000604337 90 ntBASIC-1.62□□□□□ -2.67
O00370 RNU6-231P-201ENST00000517122 103 ntBASIC-1.63□□□□□ -2.67
O00370 AC138207.3-201ENST00000585289 166 ntBASIC-1.63□□□□□ -2.67
O00370 RNU6-539P-201ENST00000516665 103 ntBASIC-1.64□□□□□ -2.67
O00370 RNU6-810P-201ENST00000364001 107 ntBASIC-1.65□□□□□ -2.67
O00370 MIR23C-201ENST00000579846 100 ntBASIC-1.65□□□□□ -2.67
O00370 MIR4520-1-201ENST00000582609 70 ntBASIC-1.66□□□□□ -2.68
O00370 RNU6-776P-201ENST00000364403 104 ntBASIC-1.67□□□□□ -2.68
O00370 RNU6-1022P-201ENST00000365049 104 ntBASIC-1.67□□□□□ -2.68
O00370 AC120024.2-201ENST00000576526 175 ntBASIC-1.67□□□□□ -2.68
O00370 MIR4662A-201ENST00000637499 67 ntBASIC-1.67□□□□□ -2.68
O00370 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.68□□□□□ -2.68
O00370 RNU6-122P-201ENST00000516818 107 ntBASIC-1.68□□□□□ -2.68
O00370 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.68□□□□□ -2.68
O00370 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.69□□□□□ -2.68
O00370 HLA-S-202ENST00000425174 53 ntBASIC-1.69□□□□□ -2.68
O00370 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.7□□□□□ -2.68
O00370 SNORA27.2-201ENST00000363365 126 ntBASIC-1.7□□□□□ -2.68
O00370 MIR125B1-201ENST00000385236 88 ntBASIC-1.7□□□□□ -2.68
O00370 MIR4511-201ENST00000582784 87 ntBASIC-1.7□□□□□ -2.68
O00370 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.71□□□□□ -2.68
O00370 RNU6-563P-201ENST00000364872 108 ntBASIC-1.71□□□□□ -2.68
O00370 RNU6-974P-201ENST00000384099 108 ntBASIC-1.72□□□□□ -2.68
O00370 RNU6-800P-201ENST00000384473 103 ntBASIC-1.72□□□□□ -2.68
O00370 RNU6-400P-201ENST00000391173 106 ntBASIC-1.72□□□□□ -2.68
O00370 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.72□□□□□ -2.68
O00370 RNU7-160P-201ENST00000516660 62 ntBASIC-1.72□□□□□ -2.68
O00370 AC103706.3-201ENST00000636297 85 ntBASIC-1.72□□□□□ -2.68
O00370 RNU6-828P-201ENST00000364876 107 ntBASIC-1.73□□□□□ -2.69
O00370 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.73□□□□□ -2.69
O00370 RNU6-79P-201ENST00000362511 107 ntBASIC-1.74□□□□□ -2.69
O00370 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.74□□□□□ -2.69
O00370 RNU6-940P-201ENST00000363433 104 ntBASIC-1.75□□□□□ -2.69
O00370 RNU7-119P-201ENST00000459279 63 ntBASIC-1.75□□□□□ -2.69
O00370 MIR5591-201ENST00000578248 65 ntBASIC-1.75□□□□□ -2.69
O00370 RNY4P27-201ENST00000363341 96 ntBASIC-1.76□□□□□ -2.69
O00370 SNORA40B-201ENST00000385573 128 ntBASIC-1.76□□□□□ -2.69
O00370 RNY3P8-201ENST00000411366 126 ntBASIC-1.76□□□□□ -2.69
O00370 Y_RNA.685-201ENST00000516532 108 ntBASIC-1.78□□□□□ -2.69
O00370 MIR4770-201ENST00000579149 58 ntBASIC-1.78□□□□□ -2.69
O00370 MIR6502-201ENST00000617296 76 ntBASIC-1.78□□□□□ -2.69
O00370 MIR466-201ENST00000580653 84 ntBASIC-1.79□□□□□ -2.7
O00370 U6.97-201ENST00000636904 101 ntBASIC-1.79□□□□□ -2.7
O00370 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.81□□□□□ -2.7
O00370 SNORA40.16-201ENST00000517238 121 ntBASIC-1.81□□□□□ -2.7
O00370 RNU6-520P-201ENST00000384717 104 ntBASIC-1.82□□□□□ -2.7
O00370 AC013734.1-201ENST00000619329 111 ntBASIC-1.83□□□□□ -2.7
O00370 MIR1246-201ENST00000636535 73 ntBASIC-1.84□□□□□ -2.7
O00370 MIR3938-201ENST00000582157 103 ntBASIC-1.85□□□□□ -2.71
O00370 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.85□□□□□ -2.71
O00370 RNU6-695P-201ENST00000391157 104 ntBASIC-1.86□□□□□ -2.71
O00370 RNU6-1296P-201ENST00000383879 107 ntBASIC-1.87□□□□□ -2.71
O00370 RNU6-1275P-201ENST00000391087 107 ntBASIC-1.87□□□□□ -2.71
O00370 MIR202-201ENST00000362219 110 ntBASIC-1.88□□□□□ -2.71
O00370 RNU6-226P-201ENST00000363778 107 ntBASIC-1.88□□□□□ -2.71
O00370 AC114801.3-201ENST00000510231 177 ntBASIC-1.89□□□□□ -2.71
O00370 RNU6-530P-201ENST00000391180 107 ntBASIC-1.91□□□□□ -2.72
O00370 AC110620.1-201ENST00000416042 228 ntBASIC-1.91□□□□□ -2.72
O00370 SNORA72.7-201ENST00000516349 94 ntBASIC-1.91□□□□□ -2.72
O00370 MIR548H1-201ENST00000408610 102 ntBASIC-1.92□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms