Protein–RNA interactions for Protein: A0A0B4J263

TRAV39, T-cell receptor alpha variable 39 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39A0A0B4J263 RNU6-119P-201ENST00000364882 107 ntBASIC-2.14□□□□□ -2.75
TRAV39A0A0B4J263 SNORD115-31-201ENST00000365318 82 ntBASIC-2.14□□□□□ -2.75
TRAV39A0A0B4J263 RNU6-669P-201ENST00000365575 107 ntBASIC-2.14□□□□□ -2.75
TRAV39A0A0B4J263 RNU6-789P-201ENST00000517105 102 ntBASIC-2.14□□□□□ -2.75
TRAV39A0A0B4J263 Y_RNA.103-201ENST00000363171 102 ntBASIC-2.15□□□□□ -2.75
TRAV39A0A0B4J263 RNU6-1247P-201ENST00000516622 98 ntBASIC-2.15□□□□□ -2.75
TRAV39A0A0B4J263 MIR494-201ENST00000349529 81 ntBASIC-2.16□□□□□ -2.76
TRAV39A0A0B4J263 Y_RNA.788-201ENST00000622394 112 ntBASIC-2.16□□□□□ -2.76
TRAV39A0A0B4J263 MIR7978-201ENST00000636158 59 ntBASIC-2.16□□□□□ -2.76
TRAV39A0A0B4J263 SNORA27.2-201ENST00000363365 126 ntBASIC-2.17□□□□□ -2.76
TRAV39A0A0B4J263 Y_RNA.228-201ENST00000364346 98 ntBASIC-2.17□□□□□ -2.76
TRAV39A0A0B4J263 RNU6-242P-201ENST00000384359 107 ntBASIC-2.17□□□□□ -2.76
TRAV39A0A0B4J263 MIR487B-201ENST00000385021 84 ntBASIC-2.17□□□□□ -2.76
TRAV39A0A0B4J263 MIR3134-201ENST00000579433 74 ntBASIC-2.17□□□□□ -2.76
TRAV39A0A0B4J263 Y_RNA.781-201ENST00000620301 103 ntBASIC-2.17□□□□□ -2.76
TRAV39A0A0B4J263 MTRNR2L9-201ENST00000622562 75 ntBASIC-2.18□□□□□ -2.76
TRAV39A0A0B4J263 Y_RNA.291-201ENST00000364886 113 ntBASIC-2.19□□□□□ -2.76
TRAV39A0A0B4J263 Y_RNA.94-201ENST00000363068 106 ntBASIC-2.2□□□□□ -2.76
TRAV39A0A0B4J263 RNU6-542P-201ENST00000516405 103 ntBASIC-2.2□□□□□ -2.76
TRAV39A0A0B4J263 MIR496-201ENST00000385226 102 ntBASIC-2.21□□□□□ -2.76
TRAV39A0A0B4J263 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-2.21□□□□□ -2.76
TRAV39A0A0B4J263 MIR3123-201ENST00000583417 75 ntBASIC-2.21□□□□□ -2.76
TRAV39A0A0B4J263 RNU6-92P-201ENST00000605893 104 ntBASIC-2.21□□□□□ -2.76
TRAV39A0A0B4J263 SNORD18.1-201ENST00000363807 70 ntBASIC-2.22□□□□□ -2.76
TRAV39A0A0B4J263 RNU6-1276P-201ENST00000365372 104 ntBASIC-2.22□□□□□ -2.76
TRAV39A0A0B4J263 AC013734.1-201ENST00000619329 111 ntBASIC-2.22□□□□□ -2.76
TRAV39A0A0B4J263 U6.97-201ENST00000636904 101 ntBASIC-2.22□□□□□ -2.76
TRAV39A0A0B4J263 RNU6-523P-201ENST00000516304 54 ntBASIC-2.23□□□□□ -2.77
TRAV39A0A0B4J263 RNU6-687P-201ENST00000516443 89 ntBASIC-2.23□□□□□ -2.77
TRAV39A0A0B4J263 AC005520.4-201ENST00000604337 90 ntBASIC-2.23□□□□□ -2.77
TRAV39A0A0B4J263 Y_RNA.223-201ENST00000364290 113 ntBASIC-2.24□□□□□ -2.77
TRAV39A0A0B4J263 RNU6-974P-201ENST00000384099 108 ntBASIC-2.24□□□□□ -2.77
TRAV39A0A0B4J263 MIR125B1-201ENST00000385236 88 ntBASIC-2.24□□□□□ -2.77
TRAV39A0A0B4J263 RNY3P8-201ENST00000411366 126 ntBASIC-2.24□□□□□ -2.77
TRAV39A0A0B4J263 RNU6-1034P-201ENST00000365335 101 ntBASIC-2.25□□□□□ -2.77
TRAV39A0A0B4J263 MIR548AI-201ENST00000579940 88 ntBASIC-2.25□□□□□ -2.77
TRAV39A0A0B4J263 MIR450A2-201ENST00000385022 100 ntBASIC-2.26□□□□□ -2.77
TRAV39A0A0B4J263 Y_RNA.139-201ENST00000363464 102 ntBASIC-2.27□□□□□ -2.77
TRAV39A0A0B4J263 Y_RNA.321-201ENST00000365149 102 ntBASIC-2.27□□□□□ -2.77
TRAV39A0A0B4J263 AL603908.1-201ENST00000406098 201 ntBASIC-2.27□□□□□ -2.77
TRAV39A0A0B4J263 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-2.27□□□□□ -2.77
TRAV39A0A0B4J263 SNORD60.1-201ENST00000362451 73 ntBASIC-2.28□□□□□ -2.77
TRAV39A0A0B4J263 RNU6-841P-201ENST00000383872 107 ntBASIC-2.28□□□□□ -2.77
TRAV39A0A0B4J263 MIR4666B-201ENST00000578142 81 ntBASIC-2.28□□□□□ -2.77
TRAV39A0A0B4J263 RNU6-411P-201ENST00000384451 107 ntBASIC-2.29□□□□□ -2.78
TRAV39A0A0B4J263 Y_RNA.502-201ENST00000384478 113 ntBASIC-2.29□□□□□ -2.78
TRAV39A0A0B4J263 RNU6-118P-201ENST00000516552 102 ntBASIC-2.29□□□□□ -2.78
TRAV39A0A0B4J263 MIR7110-201ENST00000612638 86 ntBASIC-2.29□□□□□ -2.78
TRAV39A0A0B4J263 RNU6-294P-201ENST00000364999 102 ntBASIC-2.3□□□□□ -2.78
TRAV39A0A0B4J263 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-2.3□□□□□ -2.78
TRAV39A0A0B4J263 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.31□□□□□ -2.78
TRAV39A0A0B4J263 MIR548AM-201ENST00000584298 74 ntBASIC-2.31□□□□□ -2.78
TRAV39A0A0B4J263 Y_RNA.69-201ENST00000362885 109 ntBASIC-2.32□□□□□ -2.78
TRAV39A0A0B4J263 RNU6-810P-201ENST00000364001 107 ntBASIC-2.32□□□□□ -2.78
TRAV39A0A0B4J263 SNORD116.2-201ENST00000391251 93 ntBASIC-2.32□□□□□ -2.78
TRAV39A0A0B4J263 RNU7-160P-201ENST00000516660 62 ntBASIC-2.32□□□□□ -2.78
TRAV39A0A0B4J263 RNU6-1015P-201ENST00000517121 99 ntBASIC-2.32□□□□□ -2.78
TRAV39A0A0B4J263 RNU6-228P-201ENST00000362700 106 ntBASIC-2.33□□□□□ -2.78
TRAV39A0A0B4J263 RNU6-231P-201ENST00000517122 103 ntBASIC-2.33□□□□□ -2.78
TRAV39A0A0B4J263 RNU6-828P-201ENST00000364876 107 ntBASIC-2.34□□□□□ -2.78
TRAV39A0A0B4J263 Y_RNA.443-201ENST00000384135 111 ntBASIC-2.34□□□□□ -2.78
TRAV39A0A0B4J263 RNU6-520P-201ENST00000384717 104 ntBASIC-2.34□□□□□ -2.78
TRAV39A0A0B4J263 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.34□□□□□ -2.78
TRAV39A0A0B4J263 AC108019.1-201ENST00000512540 175 ntBASIC-2.35□□□□□ -2.79
TRAV39A0A0B4J263 U7.4-201ENST00000614961 63 ntBASIC-2.35□□□□□ -2.79
TRAV39A0A0B4J263 RNU6-153P-201ENST00000364422 104 ntBASIC-2.36□□□□□ -2.79
TRAV39A0A0B4J263 RNU6-787P-201ENST00000384032 107 ntBASIC-2.36□□□□□ -2.79
TRAV39A0A0B4J263 RNU6-663P-201ENST00000391105 106 ntBASIC-2.36□□□□□ -2.79
TRAV39A0A0B4J263 Y_RNA.694-201ENST00000516677 117 ntBASIC-2.36□□□□□ -2.79
TRAV39A0A0B4J263 RNU6-649P-201ENST00000384463 107 ntBASIC-2.39□□□□□ -2.79
TRAV39A0A0B4J263 MIR202-201ENST00000362219 110 ntBASIC-2.4□□□□□ -2.79
TRAV39A0A0B4J263 RNU6-634P-201ENST00000459134 106 ntBASIC-2.4□□□□□ -2.79
TRAV39A0A0B4J263 RNU6-406P-201ENST00000516470 107 ntBASIC-2.4□□□□□ -2.79
TRAV39A0A0B4J263 Y_RNA.403-201ENST00000383977 101 ntBASIC-2.41□□□□□ -2.8
TRAV39A0A0B4J263 RNU6-820P-201ENST00000384273 107 ntBASIC-2.41□□□□□ -2.8
TRAV39A0A0B4J263 SNORD18C-201ENST00000362704 69 ntBASIC-2.42□□□□□ -2.8
TRAV39A0A0B4J263 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-2.42□□□□□ -2.8
TRAV39A0A0B4J263 MIR4756-201ENST00000577874 78 ntBASIC-2.42□□□□□ -2.8
TRAV39A0A0B4J263 MIR5582-201ENST00000579697 68 ntBASIC-2.42□□□□□ -2.8
TRAV39A0A0B4J263 SNORD60-201ENST00000383903 83 ntBASIC-2.43□□□□□ -2.8
TRAV39A0A0B4J263 RNU4-88P-201ENST00000411220 86 ntBASIC-2.43□□□□□ -2.8
TRAV39A0A0B4J263 SNORA25.5-201ENST00000363782 126 ntBASIC-2.44□□□□□ -2.8
TRAV39A0A0B4J263 SNORA40B-201ENST00000385573 128 ntBASIC-2.44□□□□□ -2.8
TRAV39A0A0B4J263 AC062037.1-201ENST00000605302 128 ntBASIC-2.44□□□□□ -2.8
TRAV39A0A0B4J263 RNY4P7-201ENST00000364600 96 ntBASIC-2.45□□□□□ -2.8
TRAV39A0A0B4J263 Y_RNA.545-201ENST00000384652 105 ntBASIC-2.45□□□□□ -2.8
TRAV39A0A0B4J263 SNORD30.1-201ENST00000391309 70 ntBASIC-2.45□□□□□ -2.8
TRAV39A0A0B4J263 SNORD54-201ENST00000459159 67 ntBASIC-2.45□□□□□ -2.8
TRAV39A0A0B4J263 snoU13.10-201ENST00000459301 103 ntBASIC-2.45□□□□□ -2.8
TRAV39A0A0B4J263 RNU6-1206P-201ENST00000516339 103 ntBASIC-2.45□□□□□ -2.8
TRAV39A0A0B4J263 RNU6-980P-201ENST00000516925 103 ntBASIC-2.45□□□□□ -2.8
TRAV39A0A0B4J263 RNU6-122P-201ENST00000516818 107 ntBASIC-2.46□□□□□ -2.8
TRAV39A0A0B4J263 RNA5SP93-201ENST00000362525 114 ntBASIC-2.47□□□□□ -2.8
TRAV39A0A0B4J263 SNORA25.4-201ENST00000363666 124 ntBASIC-2.47□□□□□ -2.8
TRAV39A0A0B4J263 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.47□□□□□ -2.8
TRAV39A0A0B4J263 Y_RNA.369-201ENST00000365568 117 ntBASIC-2.48□□□□□ -2.81
TRAV39A0A0B4J263 RNU6-1296P-201ENST00000383879 107 ntBASIC-2.49□□□□□ -2.81
TRAV39A0A0B4J263 MIR581-201ENST00000384895 96 ntBASIC-2.49□□□□□ -2.81
TRAV39A0A0B4J263 SNORA17.4-201ENST00000391287 132 ntBASIC-2.49□□□□□ -2.81
TRAV39A0A0B4J263 MIR548W-201ENST00000581970 74 ntBASIC-2.49□□□□□ -2.81
Retrieved 100 of 98,524 protein–RNA pairs in 171.7 ms