Protein–RNA interactions for Protein: Q9NP99

TREM1, Triggering receptor expressed on myeloid cells 1, humanhuman

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1Q9NP99 MIR202-201ENST00000362219 110 ntBASIC-3□□□□□ -2.89
TREM1Q9NP99 RNU6-1044P-201ENST00000384755 107 ntBASIC-3□□□□□ -2.89
TREM1Q9NP99 MIR548F4-201ENST00000408515 105 ntBASIC-3□□□□□ -2.89
TREM1Q9NP99 Y_RNA.612-201ENST00000410717 95 ntBASIC-3□□□□□ -2.89
TREM1Q9NP99 Y_RNA.720-201ENST00000517166 92 ntBASIC-3□□□□□ -2.89
TREM1Q9NP99 MIR548X2-201ENST00000579776 100 ntBASIC-3□□□□□ -2.89
TREM1Q9NP99 Y_RNA.139-201ENST00000363464 102 ntBASIC-3.01□□□□□ -2.89
TREM1Q9NP99 Y_RNA.321-201ENST00000365149 102 ntBASIC-3.01□□□□□ -2.89
TREM1Q9NP99 RNU6-520P-201ENST00000384717 104 ntBASIC-3.01□□□□□ -2.89
TREM1Q9NP99 MTND4LP1-201ENST00000446263 157 ntBASIC-3.01□□□□□ -2.89
TREM1Q9NP99 Y_RNA.680-201ENST00000516441 93 ntBASIC-3.01□□□□□ -2.89
TREM1Q9NP99 Y_RNA.350-201ENST00000365409 98 ntBASIC-3.02□□□□□ -2.89
TREM1Q9NP99 Y_RNA.434-201ENST00000384090 100 ntBASIC-3.02□□□□□ -2.89
TREM1Q9NP99 Y_RNA.459-201ENST00000384251 102 ntBASIC-3.02□□□□□ -2.89
TREM1Q9NP99 RNU6-162P-201ENST00000516228 103 ntBASIC-3.02□□□□□ -2.89
TREM1Q9NP99 RNU6-68P-201ENST00000516576 104 ntBASIC-3.02□□□□□ -2.89
TREM1Q9NP99 RNU6-111P-201ENST00000517179 105 ntBASIC-3.02□□□□□ -2.89
TREM1Q9NP99 RNU6-649P-201ENST00000384463 107 ntBASIC-3.03□□□□□ -2.89
TREM1Q9NP99 RNU6-182P-201ENST00000516970 105 ntBASIC-3.03□□□□□ -2.89
TREM1Q9NP99 RNU6-303P-201ENST00000517091 106 ntBASIC-3.03□□□□□ -2.89
TREM1Q9NP99 RNU6-624P-201ENST00000363411 107 ntBASIC-3.04□□□□□ -2.9
TREM1Q9NP99 MIR548AJ2-201ENST00000408539 92 ntBASIC-3.04□□□□□ -2.9
TREM1Q9NP99 RNU6-668P-201ENST00000364180 107 ntBASIC-3.05□□□□□ -2.9
TREM1Q9NP99 RNY4P10-201ENST00000365571 96 ntBASIC-3.05□□□□□ -2.9
TREM1Q9NP99 Y_RNA.657-201ENST00000515983 102 ntBASIC-3.05□□□□□ -2.9
TREM1Q9NP99 AL359920.1-201ENST00000618332 176 ntBASIC-3.05□□□□□ -2.9
TREM1Q9NP99 MIR379-201ENST00000362218 67 ntBASIC-3.06□□□□□ -2.9
TREM1Q9NP99 Y_RNA.63-201ENST00000362841 102 ntBASIC-3.06□□□□□ -2.9
TREM1Q9NP99 RNA5SP173-201ENST00000364857 136 ntBASIC-3.06□□□□□ -2.9
TREM1Q9NP99 SNORD116-18-201ENST00000383961 92 ntBASIC-3.06□□□□□ -2.9
TREM1Q9NP99 AC074348.1-201ENST00000426503 132 ntBASIC-3.06□□□□□ -2.9
TREM1Q9NP99 MIR3128-201ENST00000581957 66 ntBASIC-3.06□□□□□ -2.9
TREM1Q9NP99 U7.3-201ENST00000616123 62 ntBASIC-3.06□□□□□ -2.9
TREM1Q9NP99 Y_RNA.422-201ENST00000384054 114 ntBASIC-3.07□□□□□ -2.9
TREM1Q9NP99 MIR569-201ENST00000385228 96 ntBASIC-3.07□□□□□ -2.9
TREM1Q9NP99 RNU6-1211P-201ENST00000459179 105 ntBASIC-3.07□□□□□ -2.9
TREM1Q9NP99 RNU6-800P-201ENST00000384473 103 ntBASIC-3.08□□□□□ -2.9
TREM1Q9NP99 RNU6-1023P-201ENST00000516137 106 ntBASIC-3.08□□□□□ -2.9
TREM1Q9NP99 Y_RNA.47-201ENST00000362697 108 ntBASIC-3.09□□□□□ -2.9
TREM1Q9NP99 SNORD115-37-201ENST00000363768 82 ntBASIC-3.09□□□□□ -2.9
TREM1Q9NP99 Y_RNA.307-201ENST00000365022 117 ntBASIC-3.09□□□□□ -2.9
TREM1Q9NP99 Y_RNA.535-201ENST00000384612 99 ntBASIC-3.09□□□□□ -2.9
TREM1Q9NP99 Y_RNA.580-201ENST00000391004 95 ntBASIC-3.09□□□□□ -2.9
TREM1Q9NP99 SNORA17.4-201ENST00000391287 132 ntBASIC-3.09□□□□□ -2.9
TREM1Q9NP99 MIR1254-1-201ENST00000408257 97 ntBASIC-3.09□□□□□ -2.9
TREM1Q9NP99 MTCYBP6-201ENST00000441810 138 ntBASIC-3.09□□□□□ -2.9
TREM1Q9NP99 Y_RNA.652-201ENST00000458902 102 ntBASIC-3.09□□□□□ -2.9
TREM1Q9NP99 Y_RNA.149-201ENST00000363558 117 ntBASIC-3.1□□□□□ -2.91
TREM1Q9NP99 Y_RNA.281-201ENST00000364774 94 ntBASIC-3.1□□□□□ -2.91
TREM1Q9NP99 Y_RNA.532-201ENST00000384590 113 ntBASIC-3.1□□□□□ -2.91
TREM1Q9NP99 Y_RNA.662-201ENST00000516028 97 ntBASIC-3.1□□□□□ -2.91
TREM1Q9NP99 SNORD33.1-201ENST00000516213 88 ntBASIC-3.1□□□□□ -2.91
TREM1Q9NP99 SNORA20.1-201ENST00000364790 130 ntBASIC-3.11□□□□□ -2.91
TREM1Q9NP99 Y_RNA.586-201ENST00000391146 98 ntBASIC-3.11□□□□□ -2.91
TREM1Q9NP99 RNU7-107P-201ENST00000459121 61 ntBASIC-3.11□□□□□ -2.91
TREM1Q9NP99 SNORD113.1-201ENST00000363280 73 ntBASIC-3.12□□□□□ -2.91
TREM1Q9NP99 RNU6-361P-201ENST00000364454 107 ntBASIC-3.12□□□□□ -2.91
TREM1Q9NP99 AL117187.1-201ENST00000555482 181 ntBASIC-3.12□□□□□ -2.91
TREM1Q9NP99 Y_RNA.69-201ENST00000362885 109 ntBASIC-3.13□□□□□ -2.91
TREM1Q9NP99 RNU6-129P-201ENST00000391022 107 ntBASIC-3.13□□□□□ -2.91
TREM1Q9NP99 RNU6-557P-201ENST00000516842 110 ntBASIC-3.13□□□□□ -2.91
TREM1Q9NP99 RNU6-633P-201ENST00000362612 103 ntBASIC-3.14□□□□□ -2.91
TREM1Q9NP99 MIR590-201ENST00000385008 97 ntBASIC-3.14□□□□□ -2.91
TREM1Q9NP99 AC093729.1-201ENST00000513074 128 ntBASIC-3.14□□□□□ -2.91
TREM1Q9NP99 Y_RNA.668-201ENST00000516233 93 ntBASIC-3.14□□□□□ -2.91
TREM1Q9NP99 MTATP8P2-201ENST00000435212 202 ntBASIC-3.15□□□□□ -2.91
TREM1Q9NP99 AC044792.1-201ENST00000593294 196 ntBASIC-3.15□□□□□ -2.91
TREM1Q9NP99 RNU6-1107P-201ENST00000364817 104 ntBASIC-3.16□□□□□ -2.92
TREM1Q9NP99 RNU6-686P-201ENST00000364839 107 ntBASIC-3.16□□□□□ -2.92
TREM1Q9NP99 MTND4LP9-201ENST00000427694 174 ntBASIC-3.16□□□□□ -2.92
TREM1Q9NP99 RNU7-160P-201ENST00000516660 62 ntBASIC-3.16□□□□□ -2.92
TREM1Q9NP99 RNU6-345P-201ENST00000517001 107 ntBASIC-3.16□□□□□ -2.92
TREM1Q9NP99 MIR4484-201ENST00000582855 83 ntBASIC-3.16□□□□□ -2.92
TREM1Q9NP99 MIR3914-2-201ENST00000637339 95 ntBASIC-3.16□□□□□ -2.92
TREM1Q9NP99 Y_RNA.107-201ENST00000363190 121 ntBASIC-3.17□□□□□ -2.92
TREM1Q9NP99 SNORD45A-201ENST00000384512 84 ntBASIC-3.17□□□□□ -2.92
TREM1Q9NP99 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-3.17□□□□□ -2.92
TREM1Q9NP99 Y_RNA.129-201ENST00000363392 110 ntBASIC-3.18□□□□□ -2.92
TREM1Q9NP99 RNU6-1047P-201ENST00000364418 107 ntBASIC-3.18□□□□□ -2.92
TREM1Q9NP99 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-3.18□□□□□ -2.92
TREM1Q9NP99 RNU6-394P-201ENST00000410735 107 ntBASIC-3.18□□□□□ -2.92
TREM1Q9NP99 Y_RNA.663-201ENST00000516043 101 ntBASIC-3.18□□□□□ -2.92
TREM1Q9NP99 RNU6-426P-201ENST00000516464 97 ntBASIC-3.18□□□□□ -2.92
TREM1Q9NP99 MIR8053-201ENST00000613344 75 ntBASIC-3.18□□□□□ -2.92
TREM1Q9NP99 MIRLET7A1-201ENST00000362295 80 ntBASIC-3.19□□□□□ -2.92
TREM1Q9NP99 Y_RNA.297-201ENST00000364950 91 ntBASIC-3.19□□□□□ -2.92
TREM1Q9NP99 Y_RNA.219-201ENST00000364232 113 ntBASIC-3.2□□□□□ -2.92
TREM1Q9NP99 RNU6-554P-201ENST00000410466 106 ntBASIC-3.2□□□□□ -2.92
TREM1Q9NP99 RNU6-402P-201ENST00000410678 103 ntBASIC-3.2□□□□□ -2.92
TREM1Q9NP99 RNU6-109P-201ENST00000516364 107 ntBASIC-3.2□□□□□ -2.92
TREM1Q9NP99 RNU6-659P-201ENST00000516454 104 ntBASIC-3.2□□□□□ -2.92
TREM1Q9NP99 RNU6-184P-201ENST00000516514 107 ntBASIC-3.2□□□□□ -2.92
TREM1Q9NP99 Y_RNA.604-201ENST00000410574 102 ntBASIC-3.21□□□□□ -2.92
TREM1Q9NP99 RNU7-120P-201ENST00000459334 63 ntBASIC-3.21□□□□□ -2.92
TREM1Q9NP99 MIR4668-201ENST00000582284 70 ntBASIC-3.21□□□□□ -2.92
TREM1Q9NP99 AC062037.2-201ENST00000610137 73 ntBASIC-3.21□□□□□ -2.92
TREM1Q9NP99 RNU6-867P-201ENST00000364956 107 ntBASIC-3.22□□□□□ -2.92
TREM1Q9NP99 RNU6-804P-201ENST00000384286 107 ntBASIC-3.22□□□□□ -2.92
TREM1Q9NP99 MIR4801-201ENST00000582704 82 ntBASIC-3.22□□□□□ -2.92
TREM1Q9NP99 AP001318.4-201ENST00000616637 121 ntBASIC-3.22□□□□□ -2.92
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms