Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.64□□□□□ -2.67
POLR1EQ9GZS1 MIR496-201ENST00000385226 102 ntBASIC-1.64□□□□□ -2.67
POLR1EQ9GZS1 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.65□□□□□ -2.67
POLR1EQ9GZS1 SNORD45.1-201ENST00000363181 77 ntBASIC-1.65□□□□□ -2.67
POLR1EQ9GZS1 Y_RNA.273-201ENST00000364703 102 ntBASIC-1.65□□□□□ -2.67
POLR1EQ9GZS1 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.65□□□□□ -2.67
POLR1EQ9GZS1 MIR488-201ENST00000365739 83 ntBASIC-1.65□□□□□ -2.67
POLR1EQ9GZS1 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.65□□□□□ -2.67
POLR1EQ9GZS1 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.65□□□□□ -2.67
POLR1EQ9GZS1 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.66□□□□□ -2.68
POLR1EQ9GZS1 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.66□□□□□ -2.68
POLR1EQ9GZS1 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.66□□□□□ -2.68
POLR1EQ9GZS1 RNU6-458P-201ENST00000384179 107 ntBASIC-1.66□□□□□ -2.68
POLR1EQ9GZS1 RNU6-695P-201ENST00000391157 104 ntBASIC-1.66□□□□□ -2.68
POLR1EQ9GZS1 U6.58-201ENST00000613107 107 ntBASIC-1.66□□□□□ -2.68
POLR1EQ9GZS1 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.67□□□□□ -2.68
POLR1EQ9GZS1 RNU6-129P-201ENST00000391022 107 ntBASIC-1.67□□□□□ -2.68
POLR1EQ9GZS1 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.67□□□□□ -2.68
POLR1EQ9GZS1 MIR3910-1-201ENST00000580936 111 ntBASIC-1.67□□□□□ -2.68
POLR1EQ9GZS1 RNU6-119P-201ENST00000364882 107 ntBASIC-1.68□□□□□ -2.68
POLR1EQ9GZS1 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.68□□□□□ -2.68
POLR1EQ9GZS1 AC120024.2-201ENST00000576526 175 ntBASIC-1.68□□□□□ -2.68
POLR1EQ9GZS1 RNU6-640P-201ENST00000363693 105 ntBASIC-1.69□□□□□ -2.68
POLR1EQ9GZS1 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.69□□□□□ -2.68
POLR1EQ9GZS1 RNU6-755P-201ENST00000364400 103 ntBASIC-1.69□□□□□ -2.68
POLR1EQ9GZS1 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.69□□□□□ -2.68
POLR1EQ9GZS1 RNU6-587P-201ENST00000391282 106 ntBASIC-1.69□□□□□ -2.68
POLR1EQ9GZS1 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.69□□□□□ -2.68
POLR1EQ9GZS1 MIR4484-201ENST00000582855 83 ntBASIC-1.69□□□□□ -2.68
POLR1EQ9GZS1 MIR3123-201ENST00000583417 75 ntBASIC-1.69□□□□□ -2.68
POLR1EQ9GZS1 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.7□□□□□ -2.68
POLR1EQ9GZS1 RNU6-118P-201ENST00000516552 102 ntBASIC-1.7□□□□□ -2.68
POLR1EQ9GZS1 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.71□□□□□ -2.68
POLR1EQ9GZS1 RNU6-675P-201ENST00000384236 104 ntBASIC-1.71□□□□□ -2.68
POLR1EQ9GZS1 RNU6-598P-201ENST00000364017 105 ntBASIC-1.72□□□□□ -2.68
POLR1EQ9GZS1 RNU4-88P-201ENST00000411220 86 ntBASIC-1.72□□□□□ -2.68
POLR1EQ9GZS1 RNU6-980P-201ENST00000516925 103 ntBASIC-1.72□□□□□ -2.68
POLR1EQ9GZS1 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.72□□□□□ -2.68
POLR1EQ9GZS1 U4.4-201ENST00000620626 117 ntBASIC-1.72□□□□□ -2.68
POLR1EQ9GZS1 U2.18-201ENST00000622185 84 ntBASIC-1.72□□□□□ -2.68
POLR1EQ9GZS1 RNU6-698P-201ENST00000363523 107 ntBASIC-1.73□□□□□ -2.69
POLR1EQ9GZS1 RNU6-34P-201ENST00000364874 107 ntBASIC-1.73□□□□□ -2.69
POLR1EQ9GZS1 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.73□□□□□ -2.69
POLR1EQ9GZS1 RNU6-696P-201ENST00000390834 107 ntBASIC-1.73□□□□□ -2.69
POLR1EQ9GZS1 MIR548AM-201ENST00000584298 74 ntBASIC-1.73□□□□□ -2.69
POLR1EQ9GZS1 MIR664B-201ENST00000626756 61 ntBASIC-1.73□□□□□ -2.69
POLR1EQ9GZS1 AC006160.2-201ENST00000637708 154 ntBASIC-1.73□□□□□ -2.69
POLR1EQ9GZS1 RNU6-32P-201ENST00000383948 107 ntBASIC-1.74□□□□□ -2.69
POLR1EQ9GZS1 RNU6-13P-201ENST00000384248 107 ntBASIC-1.74□□□□□ -2.69
POLR1EQ9GZS1 RNU6-12P-201ENST00000384604 107 ntBASIC-1.74□□□□□ -2.69
POLR1EQ9GZS1 RNU6-41P-201ENST00000384741 107 ntBASIC-1.74□□□□□ -2.69
POLR1EQ9GZS1 RNU6-258P-201ENST00000390884 101 ntBASIC-1.74□□□□□ -2.69
POLR1EQ9GZS1 RNU6-844P-201ENST00000517175 102 ntBASIC-1.74□□□□□ -2.69
POLR1EQ9GZS1 SNORA63.4-201ENST00000362763 126 ntBASIC-1.75□□□□□ -2.69
POLR1EQ9GZS1 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.75□□□□□ -2.69
POLR1EQ9GZS1 MIR1297-201ENST00000637311 77 ntBASIC-1.75□□□□□ -2.69
POLR1EQ9GZS1 SNORD115-31-201ENST00000365318 82 ntBASIC-1.76□□□□□ -2.69
POLR1EQ9GZS1 SNORD113-1-201ENST00000365321 69 ntBASIC-1.76□□□□□ -2.69
POLR1EQ9GZS1 RNU6-147P-201ENST00000383983 107 ntBASIC-1.76□□□□□ -2.69
POLR1EQ9GZS1 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.77□□□□□ -2.69
POLR1EQ9GZS1 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.77□□□□□ -2.69
POLR1EQ9GZS1 MIR548V-201ENST00000584165 80 ntBASIC-1.77□□□□□ -2.69
POLR1EQ9GZS1 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.78□□□□□ -2.69
POLR1EQ9GZS1 RNU6-841P-201ENST00000383872 107 ntBASIC-1.78□□□□□ -2.69
POLR1EQ9GZS1 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.78□□□□□ -2.69
POLR1EQ9GZS1 AC013734.1-201ENST00000619329 111 ntBASIC-1.78□□□□□ -2.69
POLR1EQ9GZS1 MIR429-201ENST00000362106 83 ntBASIC-1.79□□□□□ -2.7
POLR1EQ9GZS1 MIR630-201ENST00000384957 97 ntBASIC-1.79□□□□□ -2.7
POLR1EQ9GZS1 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.79□□□□□ -2.7
POLR1EQ9GZS1 MTND4LP1-201ENST00000446263 157 ntBASIC-1.79□□□□□ -2.7
POLR1EQ9GZS1 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.79□□□□□ -2.7
POLR1EQ9GZS1 MIR3170-201ENST00000582699 77 ntBASIC-1.79□□□□□ -2.7
POLR1EQ9GZS1 SNORD113.1-201ENST00000363280 73 ntBASIC-1.81□□□□□ -2.7
POLR1EQ9GZS1 RNU6-380P-201ENST00000410207 107 ntBASIC-1.81□□□□□ -2.7
POLR1EQ9GZS1 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.81□□□□□ -2.7
POLR1EQ9GZS1 MIR664A-201ENST00000626086 82 ntBASIC-1.81□□□□□ -2.7
POLR1EQ9GZS1 U6.97-201ENST00000636904 101 ntBASIC-1.81□□□□□ -2.7
POLR1EQ9GZS1 Y_RNA.593-201ENST00000410292 98 ntBASIC-1.82□□□□□ -2.7
POLR1EQ9GZS1 MIR8053-201ENST00000613344 75 ntBASIC-1.82□□□□□ -2.7
POLR1EQ9GZS1 Y_RNA.73-201ENST00000362910 113 ntBASIC-1.83□□□□□ -2.7
POLR1EQ9GZS1 RNU6-668P-201ENST00000364180 107 ntBASIC-1.83□□□□□ -2.7
POLR1EQ9GZS1 RNU6-1134P-201ENST00000365156 101 ntBASIC-1.83□□□□□ -2.7
POLR1EQ9GZS1 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.83□□□□□ -2.7
POLR1EQ9GZS1 SNORD45A-201ENST00000384512 84 ntBASIC-1.83□□□□□ -2.7
POLR1EQ9GZS1 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.83□□□□□ -2.7
POLR1EQ9GZS1 Y_RNA.607-201ENST00000410597 98 ntBASIC-1.83□□□□□ -2.7
POLR1EQ9GZS1 AL606753.1-201ENST00000427435 87 ntBASIC-1.83□□□□□ -2.7
POLR1EQ9GZS1 snoU13.10-201ENST00000459301 103 ntBASIC-1.83□□□□□ -2.7
POLR1EQ9GZS1 MIR548W-201ENST00000581970 74 ntBASIC-1.83□□□□□ -2.7
POLR1EQ9GZS1 RNA5SP93-201ENST00000362525 114 ntBASIC-1.84□□□□□ -2.7
POLR1EQ9GZS1 RNA5SP405-201ENST00000363059 114 ntBASIC-1.84□□□□□ -2.7
POLR1EQ9GZS1 RNA5SP215-201ENST00000363440 122 ntBASIC-1.84□□□□□ -2.7
POLR1EQ9GZS1 RNU6-194P-201ENST00000363862 105 ntBASIC-1.84□□□□□ -2.7
POLR1EQ9GZS1 RNU6-215P-201ENST00000365169 102 ntBASIC-1.84□□□□□ -2.7
POLR1EQ9GZS1 SNORD20-201ENST00000384550 80 ntBASIC-1.84□□□□□ -2.7
POLR1EQ9GZS1 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.84□□□□□ -2.7
POLR1EQ9GZS1 SNORD113-2-201ENST00000391082 72 ntBASIC-1.84□□□□□ -2.7
POLR1EQ9GZS1 AC005520.4-201ENST00000604337 90 ntBASIC-1.84□□□□□ -2.7
POLR1EQ9GZS1 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.84□□□□□ -2.7
POLR1EQ9GZS1 RNU6-315P-201ENST00000362666 107 ntBASIC-1.85□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 237.9 ms