Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 SCARNA15.1-201ENST00000516384 125 ntBASIC-2.48□□□□□ -2.81
NKX6-2Q9C056 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-2.48□□□□□ -2.81
NKX6-2Q9C056 RNU6-106P-201ENST00000384405 107 ntBASIC-2.49□□□□□ -2.81
NKX6-2Q9C056 SNORD113-2-201ENST00000391082 72 ntBASIC-2.49□□□□□ -2.81
NKX6-2Q9C056 SNORD54-201ENST00000459159 67 ntBASIC-2.49□□□□□ -2.81
NKX6-2Q9C056 Y_RNA.781-201ENST00000620301 103 ntBASIC-2.49□□□□□ -2.81
NKX6-2Q9C056 Y_RNA.506-201ENST00000384494 102 ntBASIC-2.5□□□□□ -2.81
NKX6-2Q9C056 MT-TG-201ENST00000387429 68 ntBASIC-2.5□□□□□ -2.81
NKX6-2Q9C056 AC074348.1-201ENST00000426503 132 ntBASIC-2.5□□□□□ -2.81
NKX6-2Q9C056 RNU6-557P-201ENST00000516842 110 ntBASIC-2.5□□□□□ -2.81
NKX6-2Q9C056 SNORD1B-201ENST00000363091 84 ntBASIC-2.51□□□□□ -2.81
NKX6-2Q9C056 RNU6-1306P-201ENST00000365219 99 ntBASIC-2.51□□□□□ -2.81
NKX6-2Q9C056 RNU6-1081P-201ENST00000384537 107 ntBASIC-2.51□□□□□ -2.81
NKX6-2Q9C056 RNU6-686P-201ENST00000364839 107 ntBASIC-2.52□□□□□ -2.81
NKX6-2Q9C056 RNY1P5-201ENST00000383890 115 ntBASIC-2.52□□□□□ -2.81
NKX6-2Q9C056 Y_RNA.532-201ENST00000384590 113 ntBASIC-2.52□□□□□ -2.81
NKX6-2Q9C056 MIR4748-201ENST00000578076 82 ntBASIC-2.52□□□□□ -2.81
NKX6-2Q9C056 MIR4484-201ENST00000582855 83 ntBASIC-2.52□□□□□ -2.81
NKX6-2Q9C056 RNU6-766P-201ENST00000362478 107 ntBASIC-2.53□□□□□ -2.81
NKX6-2Q9C056 RNU6-668P-201ENST00000364180 107 ntBASIC-2.53□□□□□ -2.81
NKX6-2Q9C056 RNU6-907P-201ENST00000390924 102 ntBASIC-2.53□□□□□ -2.81
NKX6-2Q9C056 RNU6-995P-201ENST00000391244 107 ntBASIC-2.53□□□□□ -2.81
NKX6-2Q9C056 Y_RNA.620-201ENST00000411009 88 ntBASIC-2.53□□□□□ -2.81
NKX6-2Q9C056 Y_RNA.684-201ENST00000516510 99 ntBASIC-2.53□□□□□ -2.81
NKX6-2Q9C056 RNU6-1325P-201ENST00000364905 105 ntBASIC-2.54□□□□□ -2.82
NKX6-2Q9C056 RNU6-255P-201ENST00000516957 105 ntBASIC-2.54□□□□□ -2.82
NKX6-2Q9C056 RNA5SP215-201ENST00000363440 122 ntBASIC-2.55□□□□□ -2.82
NKX6-2Q9C056 RNA5SP173-201ENST00000364857 136 ntBASIC-2.56□□□□□ -2.82
NKX6-2Q9C056 Y_RNA.464-201ENST00000384282 110 ntBASIC-2.56□□□□□ -2.82
NKX6-2Q9C056 Y_RNA.544-201ENST00000384650 113 ntBASIC-2.56□□□□□ -2.82
NKX6-2Q9C056 SNORA41B-201ENST00000384785 128 ntBASIC-2.56□□□□□ -2.82
NKX6-2Q9C056 SNORD63.2-201ENST00000516303 64 ntBASIC-2.56□□□□□ -2.82
NKX6-2Q9C056 RNU6-1212P-201ENST00000517023 104 ntBASIC-2.56□□□□□ -2.82
NKX6-2Q9C056 MIRLET7A1-201ENST00000362295 80 ntBASIC-2.57□□□□□ -2.82
NKX6-2Q9C056 RNU6-694P-201ENST00000364071 147 ntBASIC-2.57□□□□□ -2.82
NKX6-2Q9C056 Y_RNA.501-201ENST00000384467 103 ntBASIC-2.57□□□□□ -2.82
NKX6-2Q9C056 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-2.57□□□□□ -2.82
NKX6-2Q9C056 MIR579-201ENST00000385221 98 ntBASIC-2.58□□□□□ -2.82
NKX6-2Q9C056 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-2.58□□□□□ -2.82
NKX6-2Q9C056 RNU7-151P-201ENST00000516930 53 ntBASIC-2.58□□□□□ -2.82
NKX6-2Q9C056 AC013734.1-201ENST00000619329 111 ntBASIC-2.58□□□□□ -2.82
NKX6-2Q9C056 MIR548BB-201ENST00000626714 66 ntBASIC-2.58□□□□□ -2.82
NKX6-2Q9C056 U6.97-201ENST00000636904 101 ntBASIC-2.58□□□□□ -2.82
NKX6-2Q9C056 Y_RNA.219-201ENST00000364232 113 ntBASIC-2.59□□□□□ -2.82
NKX6-2Q9C056 SNORD115-31-201ENST00000365318 82 ntBASIC-2.59□□□□□ -2.82
NKX6-2Q9C056 SNORD116-22-201ENST00000384430 92 ntBASIC-2.59□□□□□ -2.82
NKX6-2Q9C056 MIR548W-201ENST00000581970 74 ntBASIC-2.59□□□□□ -2.82
NKX6-2Q9C056 MTRNR2L9-201ENST00000622562 75 ntBASIC-2.59□□□□□ -2.82
NKX6-2Q9C056 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.59□□□□□ -2.82
NKX6-2Q9C056 SNORD113.1-201ENST00000363280 73 ntBASIC-2.6□□□□□ -2.83
NKX6-2Q9C056 RNU6-219P-201ENST00000364728 107 ntBASIC-2.6□□□□□ -2.83
NKX6-2Q9C056 RNU6-129P-201ENST00000391022 107 ntBASIC-2.6□□□□□ -2.83
NKX6-2Q9C056 RNU6-402P-201ENST00000410678 103 ntBASIC-2.6□□□□□ -2.83
NKX6-2Q9C056 snoU13.10-201ENST00000459301 103 ntBASIC-2.6□□□□□ -2.83
NKX6-2Q9C056 RNU6-267P-201ENST00000516714 103 ntBASIC-2.6□□□□□ -2.83
NKX6-2Q9C056 SNORA27.2-201ENST00000363365 126 ntBASIC-2.61□□□□□ -2.83
NKX6-2Q9C056 RNY4P18-201ENST00000391107 89 ntBASIC-2.61□□□□□ -2.83
NKX6-2Q9C056 MIR8053-201ENST00000613344 75 ntBASIC-2.61□□□□□ -2.83
NKX6-2Q9C056 FTX_4.1-201ENST00000616291 147 ntBASIC-2.61□□□□□ -2.83
NKX6-2Q9C056 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-2.61□□□□□ -2.83
NKX6-2Q9C056 RNU6-669P-201ENST00000365575 107 ntBASIC-2.62□□□□□ -2.83
NKX6-2Q9C056 SNORD45A-201ENST00000384512 84 ntBASIC-2.62□□□□□ -2.83
NKX6-2Q9C056 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.62□□□□□ -2.83
NKX6-2Q9C056 AC005520.4-201ENST00000604337 90 ntBASIC-2.62□□□□□ -2.83
NKX6-2Q9C056 MIR1297-201ENST00000637311 77 ntBASIC-2.62□□□□□ -2.83
NKX6-2Q9C056 RNU6-1094P-201ENST00000362416 104 ntBASIC-2.63□□□□□ -2.83
NKX6-2Q9C056 MIR2052-201ENST00000636055 55 ntBASIC-2.63□□□□□ -2.83
NKX6-2Q9C056 Y_RNA.261-201ENST00000364631 102 ntBASIC-2.64□□□□□ -2.83
NKX6-2Q9C056 Y_RNA.611-201ENST00000410682 108 ntBASIC-2.64□□□□□ -2.83
NKX6-2Q9C056 RNU6-172P-201ENST00000411000 93 ntBASIC-2.64□□□□□ -2.83
NKX6-2Q9C056 RNU6-497P-201ENST00000365316 104 ntBASIC-2.65□□□□□ -2.83
NKX6-2Q9C056 RNY3P8-201ENST00000411366 126 ntBASIC-2.65□□□□□ -2.83
NKX6-2Q9C056 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-2.66□□□□□ -2.84
NKX6-2Q9C056 RNY4P9-201ENST00000363194 97 ntBASIC-2.67□□□□□ -2.84
NKX6-2Q9C056 MIR7978-201ENST00000636158 59 ntBASIC-2.67□□□□□ -2.84
NKX6-2Q9C056 SNORA63.4-201ENST00000362763 126 ntBASIC-2.68□□□□□ -2.84
NKX6-2Q9C056 RNU6-380P-201ENST00000410207 107 ntBASIC-2.68□□□□□ -2.84
NKX6-2Q9C056 MALAT1.1-201ENST00000618249 95 ntBASIC-2.68□□□□□ -2.84
NKX6-2Q9C056 RNA5SP93-201ENST00000362525 114 ntBASIC-2.69□□□□□ -2.84
NKX6-2Q9C056 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-2.69□□□□□ -2.84
NKX6-2Q9C056 RNU6-523P-201ENST00000516304 54 ntBASIC-2.69□□□□□ -2.84
NKX6-2Q9C056 MIR664A-201ENST00000626086 82 ntBASIC-2.69□□□□□ -2.84
NKX6-2Q9C056 AC097484.2-201ENST00000509147 251 ntBASIC-2.7□□□□□ -2.84
NKX6-2Q9C056 Y_RNA.53-201ENST00000362765 102 ntBASIC-2.71□□□□□ -2.84
NKX6-2Q9C056 MIR450A1-201ENST00000362262 91 ntBASIC-2.72□□□□□ -2.84
NKX6-2Q9C056 RNU6-755P-201ENST00000364400 103 ntBASIC-2.72□□□□□ -2.84
NKX6-2Q9C056 MIR125B1-201ENST00000385236 88 ntBASIC-2.72□□□□□ -2.84
NKX6-2Q9C056 RNU6-589P-201ENST00000516485 107 ntBASIC-2.72□□□□□ -2.84
NKX6-2Q9C056 Y_RNA.228-201ENST00000364346 98 ntBASIC-2.73□□□□□ -2.85
NKX6-2Q9C056 AP001318.4-201ENST00000616637 121 ntBASIC-2.73□□□□□ -2.85
NKX6-2Q9C056 RNU6-230P-201ENST00000362457 104 ntBASIC-2.74□□□□□ -2.85
NKX6-2Q9C056 Y_RNA.139-201ENST00000363464 102 ntBASIC-2.74□□□□□ -2.85
NKX6-2Q9C056 Y_RNA.321-201ENST00000365149 102 ntBASIC-2.74□□□□□ -2.85
NKX6-2Q9C056 Y_RNA.513-201ENST00000384522 100 ntBASIC-2.74□□□□□ -2.85
NKX6-2Q9C056 AL031737.1-201ENST00000450125 223 ntBASIC-2.74□□□□□ -2.85
NKX6-2Q9C056 AC006160.2-201ENST00000637708 154 ntBASIC-2.74□□□□□ -2.85
NKX6-2Q9C056 RNU6-974P-201ENST00000384099 108 ntBASIC-2.75□□□□□ -2.85
NKX6-2Q9C056 AC008267.6-201ENST00000441664 139 ntBASIC-2.75□□□□□ -2.85
NKX6-2Q9C056 Y_RNA.647-201ENST00000459194 112 ntBASIC-2.75□□□□□ -2.85
NKX6-2Q9C056 Y_RNA.640-201ENST00000459296 112 ntBASIC-2.75□□□□□ -2.85
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms