Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 MIR3616-201ENST00000584070 92 ntBASIC0.52□□□□□ -2.33
KRTAP4-3Q9BYR4 MIR4677-201ENST00000584153 80 ntBASIC0.52□□□□□ -2.33
KRTAP4-3Q9BYR4 AL049779.4-201ENST00000604500 156 ntBASIC0.52□□□□□ -2.33
KRTAP4-3Q9BYR4 AL353765.1-201ENST00000605514 183 ntBASIC0.52□□□□□ -2.33
KRTAP4-3Q9BYR4 MIR6504-201ENST00000613520 61 ntBASIC0.52□□□□□ -2.33
KRTAP4-3Q9BYR4 Y_RNA.790-201ENST00000614282 102 ntBASIC0.52□□□□□ -2.33
KRTAP4-3Q9BYR4 Y_RNA.782-201ENST00000614695 102 ntBASIC0.52□□□□□ -2.33
KRTAP4-3Q9BYR4 U1.36-201ENST00000620684 176 ntBASIC0.52□□□□□ -2.33
KRTAP4-3Q9BYR4 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
KRTAP4-3Q9BYR4 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
KRTAP4-3Q9BYR4 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
KRTAP4-3Q9BYR4 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
KRTAP4-3Q9BYR4 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
KRTAP4-3Q9BYR4 RNA5SP139-201ENST00000364340 117 ntBASIC0.51□□□□□ -2.33
KRTAP4-3Q9BYR4 Y_RNA.468-201ENST00000384298 102 ntBASIC0.51□□□□□ -2.33
KRTAP4-3Q9BYR4 MIR934-201ENST00000401241 83 ntBASIC0.51□□□□□ -2.33
KRTAP4-3Q9BYR4 MIR1276-201ENST00000408707 83 ntBASIC0.51□□□□□ -2.33
KRTAP4-3Q9BYR4 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
KRTAP4-3Q9BYR4 RNU7-90P-201ENST00000459216 62 ntBASIC0.51□□□□□ -2.33
KRTAP4-3Q9BYR4 AC114755.3-201ENST00000481111 251 ntBASIC0.51□□□□□ -2.33
KRTAP4-3Q9BYR4 RNA5SP220-201ENST00000516298 104 ntBASIC0.51□□□□□ -2.33
KRTAP4-3Q9BYR4 MIR3612-201ENST00000579753 87 ntBASIC0.51□□□□□ -2.33
KRTAP4-3Q9BYR4 MIR3123-201ENST00000583417 75 ntBASIC0.51□□□□□ -2.33
KRTAP4-3Q9BYR4 VTRNA2-1-201ENST00000602301 127 ntBASIC0.51□□□□□ -2.33
KRTAP4-3Q9BYR4 U7.6-201ENST00000610841 64 ntBASIC0.51□□□□□ -2.33
KRTAP4-3Q9BYR4 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC0.51□□□□□ -2.33
KRTAP4-3Q9BYR4 AC084368.1-201ENST00000620935 65 ntBASIC0.51□□□□□ -2.33
KRTAP4-3Q9BYR4 MIR6734-201ENST00000621166 68 ntBASIC0.51□□□□□ -2.33
KRTAP4-3Q9BYR4 MIR664B-201ENST00000626756 61 ntBASIC0.51□□□□□ -2.33
KRTAP4-3Q9BYR4 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.51□□□□□ -2.33
KRTAP4-3Q9BYR4 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC0.5□□□□□ -2.33
KRTAP4-3Q9BYR4 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC0.5□□□□□ -2.33
KRTAP4-3Q9BYR4 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC0.5□□□□□ -2.33
KRTAP4-3Q9BYR4 RNA5SP98-201ENST00000363158 137 ntBASIC0.5□□□□□ -2.33
KRTAP4-3Q9BYR4 RNY4P9-201ENST00000363194 97 ntBASIC0.5□□□□□ -2.33
KRTAP4-3Q9BYR4 RNU6-1327P-201ENST00000365302 105 ntBASIC0.5□□□□□ -2.33
KRTAP4-3Q9BYR4 RNU6-900P-201ENST00000384498 102 ntBASIC0.5□□□□□ -2.33
KRTAP4-3Q9BYR4 MIR573-201ENST00000384964 99 ntBASIC0.5□□□□□ -2.33
KRTAP4-3Q9BYR4 MIR320A-201ENST00000385302 82 ntBASIC0.5□□□□□ -2.33
KRTAP4-3Q9BYR4 SNORD105-201ENST00000386910 85 ntBASIC0.5□□□□□ -2.33
KRTAP4-3Q9BYR4 MIR501-201ENST00000390204 84 ntBASIC0.5□□□□□ -2.33
KRTAP4-3Q9BYR4 SNORA67.6-201ENST00000391093 99 ntBASIC0.5□□□□□ -2.33
KRTAP4-3Q9BYR4 MIR876-201ENST00000401147 81 ntBASIC0.5□□□□□ -2.33
KRTAP4-3Q9BYR4 AC108019.1-201ENST00000512540 175 ntBASIC0.5□□□□□ -2.33
KRTAP4-3Q9BYR4 SNORD53B-201ENST00000577887 78 ntBASIC0.5□□□□□ -2.33
KRTAP4-3Q9BYR4 MIR151B-201ENST00000584249 96 ntBASIC0.5□□□□□ -2.33
KRTAP4-3Q9BYR4 MIR548AM-201ENST00000584298 74 ntBASIC0.5□□□□□ -2.33
KRTAP4-3Q9BYR4 PVT1_3.1-201ENST00000620853 95 ntBASIC0.5□□□□□ -2.33
KRTAP4-3Q9BYR4 uc_338.20-201ENST00000621563 178 ntBASIC0.5□□□□□ -2.33
KRTAP4-3Q9BYR4 MIR96-201ENST00000362288 78 ntBASIC0.49□□□□□ -2.33
KRTAP4-3Q9BYR4 RNA5SP331-201ENST00000364986 107 ntBASIC0.49□□□□□ -2.33
KRTAP4-3Q9BYR4 Y_RNA.327-201ENST00000365201 102 ntBASIC0.49□□□□□ -2.33
KRTAP4-3Q9BYR4 SNORA6-201ENST00000384033 151 ntBASIC0.49□□□□□ -2.33
KRTAP4-3Q9BYR4 SNORA80D-201ENST00000384488 135 ntBASIC0.49□□□□□ -2.33
KRTAP4-3Q9BYR4 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
KRTAP4-3Q9BYR4 SNORA13-201ENST00000458790 133 ntBASIC0.49□□□□□ -2.33
KRTAP4-3Q9BYR4 SNORA77B-201ENST00000578179 125 ntBASIC0.49□□□□□ -2.33
KRTAP4-3Q9BYR4 MIR4452-201ENST00000583004 71 ntBASIC0.49□□□□□ -2.33
KRTAP4-3Q9BYR4 AC022709.1-201ENST00000615967 87 ntBASIC0.49□□□□□ -2.33
KRTAP4-3Q9BYR4 MIR6515-201ENST00000619843 57 ntBASIC0.49□□□□□ -2.33
KRTAP4-3Q9BYR4 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.49□□□□□ -2.33
KRTAP4-3Q9BYR4 MIR302D-201ENST00000362275 68 ntBASIC0.48□□□□□ -2.33
KRTAP4-3Q9BYR4 RNA5SP26-201ENST00000362406 119 ntBASIC0.48□□□□□ -2.33
KRTAP4-3Q9BYR4 SNORD114-5-201ENST00000362928 70 ntBASIC0.48□□□□□ -2.33
KRTAP4-3Q9BYR4 Y_RNA.181-201ENST00000363872 101 ntBASIC0.48□□□□□ -2.33
KRTAP4-3Q9BYR4 SNORD114-3-201ENST00000364969 75 ntBASIC0.48□□□□□ -2.33
KRTAP4-3Q9BYR4 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
KRTAP4-3Q9BYR4 Y_RNA.457-201ENST00000384237 111 ntBASIC0.48□□□□□ -2.33
KRTAP4-3Q9BYR4 SNORD56B-201ENST00000384713 71 ntBASIC0.48□□□□□ -2.33
KRTAP4-3Q9BYR4 RNA5SP450-201ENST00000411206 102 ntBASIC0.48□□□□□ -2.33
KRTAP4-3Q9BYR4 VTRNA2-2P-201ENST00000516091 103 ntBASIC0.48□□□□□ -2.33
KRTAP4-3Q9BYR4 RNU6-1232P-201ENST00000516299 86 ntBASIC0.48□□□□□ -2.33
KRTAP4-3Q9BYR4 MIR4421-201ENST00000578133 69 ntBASIC0.48□□□□□ -2.33
KRTAP4-3Q9BYR4 MIR4263-201ENST00000584745 83 ntBASIC0.48□□□□□ -2.33
KRTAP4-3Q9BYR4 U6.98-201ENST00000637157 84 ntBASIC0.48□□□□□ -2.33
KRTAP4-3Q9BYR4 VTRNA1-1-201ENST00000363120 99 ntBASIC0.47□□□□□ -2.33
KRTAP4-3Q9BYR4 Y_RNA.175-201ENST00000363794 111 ntBASIC0.47□□□□□ -2.33
KRTAP4-3Q9BYR4 RNU6-841P-201ENST00000383872 107 ntBASIC0.47□□□□□ -2.33
KRTAP4-3Q9BYR4 SNORA2A-201ENST00000383885 135 ntBASIC0.47□□□□□ -2.33
KRTAP4-3Q9BYR4 RNU6-1065P-201ENST00000384513 106 ntBASIC0.47□□□□□ -2.33
KRTAP4-3Q9BYR4 MIR520E-201ENST00000384867 87 ntBASIC0.47□□□□□ -2.33
KRTAP4-3Q9BYR4 MIR598-201ENST00000384868 97 ntBASIC0.47□□□□□ -2.33
KRTAP4-3Q9BYR4 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.47□□□□□ -2.33
KRTAP4-3Q9BYR4 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.47□□□□□ -2.33
KRTAP4-3Q9BYR4 SNORA67.5-201ENST00000391036 107 ntBASIC0.47□□□□□ -2.33
KRTAP4-3Q9BYR4 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.47□□□□□ -2.33
KRTAP4-3Q9BYR4 RNA5SP492-201ENST00000411330 114 ntBASIC0.47□□□□□ -2.33
KRTAP4-3Q9BYR4 AC018880.2-201ENST00000414265 201 ntBASIC0.47□□□□□ -2.33
KRTAP4-3Q9BYR4 AC069271.1-201ENST00000445577 156 ntBASIC0.47□□□□□ -2.33
KRTAP4-3Q9BYR4 SNORD18.2-201ENST00000459604 70 ntBASIC0.47□□□□□ -2.33
KRTAP4-3Q9BYR4 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.47□□□□□ -2.33
KRTAP4-3Q9BYR4 RNU7-129P-201ENST00000516128 62 ntBASIC0.47□□□□□ -2.33
KRTAP4-3Q9BYR4 SNORA31.24-201ENST00000517232 57 ntBASIC0.47□□□□□ -2.33
KRTAP4-3Q9BYR4 MIR4255-201ENST00000579351 72 ntBASIC0.47□□□□□ -2.33
KRTAP4-3Q9BYR4 MIR4285-201ENST00000581001 85 ntBASIC0.47□□□□□ -2.33
KRTAP4-3Q9BYR4 MIR3925-201ENST00000584674 77 ntBASIC0.47□□□□□ -2.33
KRTAP4-3Q9BYR4 MIR8063-201ENST00000621930 81 ntBASIC0.47□□□□□ -2.33
KRTAP4-3Q9BYR4 MIR6086-201ENST00000638065 55 ntBASIC0.47□□□□□ -2.33
KRTAP4-3Q9BYR4 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
KRTAP4-3Q9BYR4 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms