Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 Y_RNA.175-201ENST00000363794 111 ntBASIC0.5□□□□□ -2.33
KRTAP4-4Q9BYR3 RNU6-194P-201ENST00000363862 105 ntBASIC0.5□□□□□ -2.33
KRTAP4-4Q9BYR3 Y_RNA.232-201ENST00000364369 96 ntBASIC0.5□□□□□ -2.33
KRTAP4-4Q9BYR3 Y_RNA.423-201ENST00000384057 113 ntBASIC0.5□□□□□ -2.33
KRTAP4-4Q9BYR3 RNU6-1065P-201ENST00000384513 106 ntBASIC0.5□□□□□ -2.33
KRTAP4-4Q9BYR3 MIR193B-201ENST00000384907 83 ntBASIC0.5□□□□□ -2.33
KRTAP4-4Q9BYR3 RNA5SP86-201ENST00000390869 98 ntBASIC0.5□□□□□ -2.33
KRTAP4-4Q9BYR3 AL138827.1-201ENST00000402666 306 ntBASIC0.5□□□□□ -2.33
KRTAP4-4Q9BYR3 RPS29P6-201ENST00000438196 145 ntBASIC0.5□□□□□ -2.33
KRTAP4-4Q9BYR3 AC108740.1-201ENST00000498629 225 ntBASIC0.5□□□□□ -2.33
KRTAP4-4Q9BYR3 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC0.5□□□□□ -2.33
KRTAP4-4Q9BYR3 RNA5SP217-201ENST00000515959 91 ntBASIC0.5□□□□□ -2.33
KRTAP4-4Q9BYR3 RNU6-1232P-201ENST00000516299 86 ntBASIC0.5□□□□□ -2.33
KRTAP4-4Q9BYR3 SCARNA11.2-201ENST00000517183 154 ntBASIC0.5□□□□□ -2.33
KRTAP4-4Q9BYR3 MIR1273G-201ENST00000577677 100 ntBASIC0.5□□□□□ -2.33
KRTAP4-4Q9BYR3 MIR5589-201ENST00000579442 60 ntBASIC0.5□□□□□ -2.33
KRTAP4-4Q9BYR3 RN7SL793P-201ENST00000583259 296 ntBASIC0.5□□□□□ -2.33
KRTAP4-4Q9BYR3 MIR548AM-201ENST00000584298 74 ntBASIC0.5□□□□□ -2.33
KRTAP4-4Q9BYR3 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC0.5□□□□□ -2.33
KRTAP4-4Q9BYR3 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC0.5□□□□□ -2.33
KRTAP4-4Q9BYR3 MIR6851-201ENST00000617060 67 ntBASIC0.5□□□□□ -2.33
KRTAP4-4Q9BYR3 MIR6835-201ENST00000621552 64 ntBASIC0.5□□□□□ -2.33
KRTAP4-4Q9BYR3 MIR6818-201ENST00000621576 65 ntBASIC0.5□□□□□ -2.33
KRTAP4-4Q9BYR3 SNORD33-201ENST00000362761 85 ntBASIC0.49□□□□□ -2.33
KRTAP4-4Q9BYR3 SNORD18.1-201ENST00000363807 70 ntBASIC0.49□□□□□ -2.33
KRTAP4-4Q9BYR3 RNA5SP68-201ENST00000363885 119 ntBASIC0.49□□□□□ -2.33
KRTAP4-4Q9BYR3 RNA5SP167-201ENST00000365461 116 ntBASIC0.49□□□□□ -2.33
KRTAP4-4Q9BYR3 RNU6-439P-201ENST00000384188 106 ntBASIC0.49□□□□□ -2.33
KRTAP4-4Q9BYR3 MIR221-201ENST00000385135 110 ntBASIC0.49□□□□□ -2.33
KRTAP4-4Q9BYR3 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
KRTAP4-4Q9BYR3 SNORA67.5-201ENST00000391036 107 ntBASIC0.49□□□□□ -2.33
KRTAP4-4Q9BYR3 SNORA48.3-201ENST00000391081 134 ntBASIC0.49□□□□□ -2.33
KRTAP4-4Q9BYR3 RNA5SP25-201ENST00000410815 110 ntBASIC0.49□□□□□ -2.33
KRTAP4-4Q9BYR3 AL159169.1-201ENST00000421119 127 ntBASIC0.49□□□□□ -2.33
KRTAP4-4Q9BYR3 HMGN2P19-201ENST00000425149 265 ntBASIC0.49□□□□□ -2.33
KRTAP4-4Q9BYR3 RNU6-758P-201ENST00000516292 89 ntBASIC0.49□□□□□ -2.33
KRTAP4-4Q9BYR3 SNORD22.1-201ENST00000516331 125 ntBASIC0.49□□□□□ -2.33
KRTAP4-4Q9BYR3 MIR4280-201ENST00000582178 76 ntBASIC0.49□□□□□ -2.33
KRTAP4-4Q9BYR3 TP73-AS1.1-201ENST00000611447 161 ntBASIC0.49□□□□□ -2.33
KRTAP4-4Q9BYR3 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC0.49□□□□□ -2.33
KRTAP4-4Q9BYR3 MIR6817-201ENST00000615588 66 ntBASIC0.49□□□□□ -2.33
KRTAP4-4Q9BYR3 U7.8-201ENST00000619968 63 ntBASIC0.49□□□□□ -2.33
KRTAP4-4Q9BYR3 MIR4727-201ENST00000622232 55 ntBASIC0.49□□□□□ -2.33
KRTAP4-4Q9BYR3 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
KRTAP4-4Q9BYR3 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC0.49□□□□□ -2.33
KRTAP4-4Q9BYR3 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC0.48□□□□□ -2.33
KRTAP4-4Q9BYR3 MIR302D-201ENST00000362275 68 ntBASIC0.48□□□□□ -2.33
KRTAP4-4Q9BYR3 RNY4P9-201ENST00000363194 97 ntBASIC0.48□□□□□ -2.33
KRTAP4-4Q9BYR3 Y_RNA.189-201ENST00000363959 112 ntBASIC0.48□□□□□ -2.33
KRTAP4-4Q9BYR3 MIR518B-201ENST00000385127 83 ntBASIC0.48□□□□□ -2.33
KRTAP4-4Q9BYR3 MIR27B-201ENST00000385129 97 ntBASIC0.48□□□□□ -2.33
KRTAP4-4Q9BYR3 MIR146A-201ENST00000385201 99 ntBASIC0.48□□□□□ -2.33
KRTAP4-4Q9BYR3 MIR524-201ENST00000385242 87 ntBASIC0.48□□□□□ -2.33
KRTAP4-4Q9BYR3 RNU6-910P-201ENST00000390844 107 ntBASIC0.48□□□□□ -2.33
KRTAP4-4Q9BYR3 SNORD12-201ENST00000391002 90 ntBASIC0.48□□□□□ -2.33
KRTAP4-4Q9BYR3 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC0.48□□□□□ -2.33
KRTAP4-4Q9BYR3 AL512310.8-201ENST00000550183 120 ntBASIC0.48□□□□□ -2.33
KRTAP4-4Q9BYR3 SNORD53-201ENST00000579969 78 ntBASIC0.48□□□□□ -2.33
KRTAP4-4Q9BYR3 DLEU2_6.1-201ENST00000610536 112 ntBASIC0.48□□□□□ -2.33
KRTAP4-4Q9BYR3 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
KRTAP4-4Q9BYR3 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC0.47□□□□□ -2.33
KRTAP4-4Q9BYR3 Y_RNA.185-201ENST00000363894 100 ntBASIC0.47□□□□□ -2.33
KRTAP4-4Q9BYR3 MIR587-201ENST00000384845 96 ntBASIC0.47□□□□□ -2.33
KRTAP4-4Q9BYR3 MIR764-201ENST00000390811 85 ntBASIC0.47□□□□□ -2.33
KRTAP4-4Q9BYR3 MIR1289-2-201ENST00000408360 111 ntBASIC0.47□□□□□ -2.33
KRTAP4-4Q9BYR3 UQCRHP3-201ENST00000451503 251 ntBASIC0.47□□□□□ -2.33
KRTAP4-4Q9BYR3 SNORD38.3-201ENST00000516599 73 ntBASIC0.47□□□□□ -2.33
KRTAP4-4Q9BYR3 MIR4498-201ENST00000577599 66 ntBASIC0.47□□□□□ -2.33
KRTAP4-4Q9BYR3 MIR8063-201ENST00000621930 81 ntBASIC0.47□□□□□ -2.33
KRTAP4-4Q9BYR3 MIR1291-201ENST00000627649 87 ntBASIC0.47□□□□□ -2.33
KRTAP4-4Q9BYR3 AC244205.2-202ENST00000635781 342 ntBASIC0.47□□□□□ -2.33
KRTAP4-4Q9BYR3 MIR622-201ENST00000638396 96 ntBASIC0.47□□□□□ -2.33
KRTAP4-4Q9BYR3 RNA5SP128-201ENST00000365305 116 ntBASIC0.46□□□□□ -2.34
KRTAP4-4Q9BYR3 SNORA6-201ENST00000384033 151 ntBASIC0.46□□□□□ -2.34
KRTAP4-4Q9BYR3 MIR760-201ENST00000390220 80 ntBASIC0.46□□□□□ -2.34
KRTAP4-4Q9BYR3 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
KRTAP4-4Q9BYR3 SNORA3.2-201ENST00000408221 125 ntBASIC0.46□□□□□ -2.34
KRTAP4-4Q9BYR3 Y_RNA.610-201ENST00000410681 103 ntBASIC0.46□□□□□ -2.34
KRTAP4-4Q9BYR3 RNA5SP450-201ENST00000411206 102 ntBASIC0.46□□□□□ -2.34
KRTAP4-4Q9BYR3 FABP5P4-201ENST00000437203 171 ntBASIC0.46□□□□□ -2.34
KRTAP4-4Q9BYR3 AP000533.3-201ENST00000447704 118 ntBASIC0.46□□□□□ -2.34
KRTAP4-4Q9BYR3 RPS29P23-201ENST00000458635 123 ntBASIC0.46□□□□□ -2.34
KRTAP4-4Q9BYR3 RNU7-129P-201ENST00000516128 62 ntBASIC0.46□□□□□ -2.34
KRTAP4-4Q9BYR3 SNORA62.5-201ENST00000516634 120 ntBASIC0.46□□□□□ -2.34
KRTAP4-4Q9BYR3 RN7SKP88-201ENST00000516847 250 ntBASIC0.46□□□□□ -2.34
KRTAP4-4Q9BYR3 MIR3937-201ENST00000580135 106 ntBASIC0.46□□□□□ -2.34
KRTAP4-4Q9BYR3 MIR4452-201ENST00000583004 71 ntBASIC0.46□□□□□ -2.34
KRTAP4-4Q9BYR3 MIR8081-201ENST00000611533 95 ntBASIC0.46□□□□□ -2.34
KRTAP4-4Q9BYR3 7SK.8-201ENST00000612110 250 ntBASIC0.46□□□□□ -2.34
KRTAP4-4Q9BYR3 MIR8074-201ENST00000615081 81 ntBASIC0.46□□□□□ -2.34
KRTAP4-4Q9BYR3 7SK.13-201ENST00000622040 250 ntBASIC0.46□□□□□ -2.34
KRTAP4-4Q9BYR3 MIR924-201ENST00000638017 53 ntBASIC0.46□□□□□ -2.34
KRTAP4-4Q9BYR3 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
KRTAP4-4Q9BYR3 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.45□□□□□ -2.34
KRTAP4-4Q9BYR3 RNA5SP296-201ENST00000410523 111 ntBASIC0.45□□□□□ -2.34
KRTAP4-4Q9BYR3 RNA5SP222-201ENST00000411039 105 ntBASIC0.45□□□□□ -2.34
KRTAP4-4Q9BYR3 TRMT112P2-201ENST00000512910 132 ntBASIC0.45□□□□□ -2.34
KRTAP4-4Q9BYR3 Y_RNA.678-201ENST00000516408 96 ntBASIC0.45□□□□□ -2.34
KRTAP4-4Q9BYR3 CR383656.4-201ENST00000546909 122 ntBASIC0.45□□□□□ -2.34
KRTAP4-4Q9BYR3 MIR4324-201ENST00000584846 72 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 8.9 ms