Protein–RNA interactions for Protein: Q9BRR0

ZKSCAN3, Zinc finger protein with KRAB and SCAN domains 3, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3Q9BRR0 MIR4667-201ENST00000578933 66 ntBASIC0.03□□□□□ -2.4
ZKSCAN3Q9BRR0 MIR4280-201ENST00000582178 76 ntBASIC0.03□□□□□ -2.4
ZKSCAN3Q9BRR0 SNORD57-201ENST00000448188 72 ntBASIC0.02□□□□□ -2.41
ZKSCAN3Q9BRR0 SNORD63.1-201ENST00000516178 80 ntBASIC0.02□□□□□ -2.41
ZKSCAN3Q9BRR0 MIR4263-201ENST00000584745 83 ntBASIC0.02□□□□□ -2.41
ZKSCAN3Q9BRR0 RNA5SP257-201ENST00000363023 116 ntBASIC0.01□□□□□ -2.41
ZKSCAN3Q9BRR0 SNORD114-16-201ENST00000363044 70 ntBASIC0.01□□□□□ -2.41
ZKSCAN3Q9BRR0 MIR579-201ENST00000385221 98 ntBASIC0.01□□□□□ -2.41
ZKSCAN3Q9BRR0 RNA5SP66-201ENST00000517178 101 ntBASIC0.01□□□□□ -2.41
ZKSCAN3Q9BRR0 MIR5190-201ENST00000581537 80 ntBASIC0.01□□□□□ -2.41
ZKSCAN3Q9BRR0 MIR6851-201ENST00000617060 67 ntBASIC0.01□□□□□ -2.41
ZKSCAN3Q9BRR0 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC0□□□□□ -2.41
ZKSCAN3Q9BRR0 SNORA18.1-201ENST00000363418 128 ntBASIC-0.01□□□□□ -2.41
ZKSCAN3Q9BRR0 MIR4490-201ENST00000582647 84 ntBASIC-0.01□□□□□ -2.41
ZKSCAN3Q9BRR0 SNORD114-12-201ENST00000365400 75 ntBASIC-0.03□□□□□ -2.41
ZKSCAN3Q9BRR0 RNU6-732P-201ENST00000516033 103 ntBASIC-0.03□□□□□ -2.41
ZKSCAN3Q9BRR0 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.03□□□□□ -2.41
ZKSCAN3Q9BRR0 AL590491.3-201ENST00000610731 82 ntBASIC-0.03□□□□□ -2.41
ZKSCAN3Q9BRR0 AC093726.3-201ENST00000637588 150 ntBASIC-0.03□□□□□ -2.41
ZKSCAN3Q9BRR0 SNORD74.6-201ENST00000364796 70 ntBASIC-0.04□□□□□ -2.42
ZKSCAN3Q9BRR0 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.04□□□□□ -2.42
ZKSCAN3Q9BRR0 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.04□□□□□ -2.42
ZKSCAN3Q9BRR0 SNORD38.3-201ENST00000516599 73 ntBASIC-0.04□□□□□ -2.42
ZKSCAN3Q9BRR0 RNU6-1267P-201ENST00000410747 107 ntBASIC-0.05□□□□□ -2.42
ZKSCAN3Q9BRR0 MIR3666-201ENST00000607845 111 ntBASIC-0.05□□□□□ -2.42
ZKSCAN3Q9BRR0 Y_RNA.69-201ENST00000362885 109 ntBASIC-0.06□□□□□ -2.42
ZKSCAN3Q9BRR0 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.06□□□□□ -2.42
ZKSCAN3Q9BRR0 MIR548X-201ENST00000580069 75 ntBASIC-0.06□□□□□ -2.42
ZKSCAN3Q9BRR0 RNU6-1206P-201ENST00000516339 103 ntBASIC-0.07□□□□□ -2.42
ZKSCAN3Q9BRR0 MIR125B1-201ENST00000385236 88 ntBASIC-0.08□□□□□ -2.42
ZKSCAN3Q9BRR0 RNU6-828P-201ENST00000364876 107 ntBASIC-0.09□□□□□ -2.42
ZKSCAN3Q9BRR0 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.09□□□□□ -2.42
ZKSCAN3Q9BRR0 MIR518B-201ENST00000385127 83 ntBASIC-0.09□□□□□ -2.42
ZKSCAN3Q9BRR0 RNU6-980P-201ENST00000516925 103 ntBASIC-0.09□□□□□ -2.42
ZKSCAN3Q9BRR0 Y_RNA.379-201ENST00000365653 102 ntBASIC-0.1□□□□□ -2.43
ZKSCAN3Q9BRR0 MIR329-2-201ENST00000385029 84 ntBASIC-0.1□□□□□ -2.43
ZKSCAN3Q9BRR0 SNORD4A-201ENST00000459174 72 ntBASIC-0.1□□□□□ -2.43
ZKSCAN3Q9BRR0 SNORD18.2-201ENST00000459604 70 ntBASIC-0.1□□□□□ -2.43
ZKSCAN3Q9BRR0 RNU6-419P-201ENST00000517030 63 ntBASIC-0.1□□□□□ -2.43
ZKSCAN3Q9BRR0 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.12□□□□□ -2.43
ZKSCAN3Q9BRR0 RNU4-33P-201ENST00000364316 85 ntBASIC-0.13□□□□□ -2.43
ZKSCAN3Q9BRR0 SNORA13-201ENST00000458790 133 ntBASIC-0.13□□□□□ -2.43
ZKSCAN3Q9BRR0 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.14□□□□□ -2.43
ZKSCAN3Q9BRR0 SNORD22.1-201ENST00000516331 125 ntBASIC-0.14□□□□□ -2.43
ZKSCAN3Q9BRR0 RNA5SP285-201ENST00000516619 119 ntBASIC-0.14□□□□□ -2.43
ZKSCAN3Q9BRR0 MIR4788-201ENST00000639104 80 ntBASIC-0.14□□□□□ -2.43
ZKSCAN3Q9BRR0 MIR204-201ENST00000385200 110 ntBASIC-0.15□□□□□ -2.43
ZKSCAN3Q9BRR0 RNU6-1111P-201ENST00000391118 107 ntBASIC-0.15□□□□□ -2.43
ZKSCAN3Q9BRR0 MIR3170-201ENST00000582699 77 ntBASIC-0.15□□□□□ -2.43
ZKSCAN3Q9BRR0 RNA5SP300-201ENST00000391197 107 ntBASIC-0.16□□□□□ -2.44
ZKSCAN3Q9BRR0 MIR548Q-201ENST00000408404 100 ntBASIC-0.16□□□□□ -2.44
ZKSCAN3Q9BRR0 RNU6-247P-201ENST00000362636 107 ntBASIC-0.17□□□□□ -2.44
ZKSCAN3Q9BRR0 SNORA32.1-201ENST00000364514 115 ntBASIC-0.17□□□□□ -2.44
ZKSCAN3Q9BRR0 SNORD75.1-201ENST00000408373 60 ntBASIC-0.17□□□□□ -2.44
ZKSCAN3Q9BRR0 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.18□□□□□ -2.44
ZKSCAN3Q9BRR0 SNORA26.4-201ENST00000391188 123 ntBASIC-0.18□□□□□ -2.44
ZKSCAN3Q9BRR0 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.18□□□□□ -2.44
ZKSCAN3Q9BRR0 Y_RNA.139-201ENST00000363464 102 ntBASIC-0.19□□□□□ -2.44
ZKSCAN3Q9BRR0 RNU6-753P-201ENST00000363926 107 ntBASIC-0.19□□□□□ -2.44
ZKSCAN3Q9BRR0 SNORD19-201ENST00000391191 68 ntBASIC-0.19□□□□□ -2.44
ZKSCAN3Q9BRR0 MIR3179-1-201ENST00000578940 84 ntBASIC-0.2□□□□□ -2.44
ZKSCAN3Q9BRR0 MIR3179-2-201ENST00000579107 84 ntBASIC-0.2□□□□□ -2.44
ZKSCAN3Q9BRR0 MIR3179-3-201ENST00000579566 84 ntBASIC-0.2□□□□□ -2.44
ZKSCAN3Q9BRR0 MIR3179-4-201ENST00000617599 84 ntBASIC-0.2□□□□□ -2.44
ZKSCAN3Q9BRR0 SNORD63.2-201ENST00000516303 64 ntBASIC-0.21□□□□□ -2.44
ZKSCAN3Q9BRR0 MTRNR2L9-201ENST00000622562 75 ntBASIC-0.21□□□□□ -2.44
ZKSCAN3Q9BRR0 MIR6759-201ENST00000638110 65 ntBASIC-0.21□□□□□ -2.44
ZKSCAN3Q9BRR0 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.22□□□□□ -2.44
ZKSCAN3Q9BRR0 SNORD114-31-201ENST00000363219 75 ntBASIC-0.22□□□□□ -2.44
ZKSCAN3Q9BRR0 SNORD115-33-201ENST00000363723 82 ntBASIC-0.22□□□□□ -2.44
ZKSCAN3Q9BRR0 Y_RNA.321-201ENST00000365149 102 ntBASIC-0.22□□□□□ -2.44
ZKSCAN3Q9BRR0 AL451105.1-201ENST00000450005 189 ntBASIC-0.22□□□□□ -2.44
ZKSCAN3Q9BRR0 SNORD114-11-201ENST00000363738 75 ntBASIC-0.23□□□□□ -2.45
ZKSCAN3Q9BRR0 AL353691.2-201ENST00000443795 59 ntBASIC-0.23□□□□□ -2.45
ZKSCAN3Q9BRR0 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-0.23□□□□□ -2.45
ZKSCAN3Q9BRR0 SNORD45.2-201ENST00000363552 72 ntBASIC-0.24□□□□□ -2.45
ZKSCAN3Q9BRR0 IGLVI-20-201ENST00000519296 130 ntBASIC-0.24□□□□□ -2.45
ZKSCAN3Q9BRR0 MIR214-201ENST00000385214 110 ntBASIC-0.25□□□□□ -2.45
ZKSCAN3Q9BRR0 AP000533.3-201ENST00000447704 118 ntBASIC-0.25□□□□□ -2.45
ZKSCAN3Q9BRR0 RNA5SP169-201ENST00000517268 117 ntBASIC-0.25□□□□□ -2.45
ZKSCAN3Q9BRR0 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.27□□□□□ -2.45
ZKSCAN3Q9BRR0 RNU4-88P-201ENST00000411220 86 ntBASIC-0.27□□□□□ -2.45
ZKSCAN3Q9BRR0 MIR5683-201ENST00000636514 76 ntBASIC-0.27□□□□□ -2.45
ZKSCAN3Q9BRR0 SNORD114-17-201ENST00000364699 75 ntBASIC-0.29□□□□□ -2.46
ZKSCAN3Q9BRR0 RNU6-974P-201ENST00000384099 108 ntBASIC-0.3□□□□□ -2.46
ZKSCAN3Q9BRR0 RNU6-35P-201ENST00000384530 107 ntBASIC-0.3□□□□□ -2.46
ZKSCAN3Q9BRR0 MIR520D-201ENST00000385002 87 ntBASIC-0.3□□□□□ -2.46
ZKSCAN3Q9BRR0 AC021146.6-201ENST00000514659 117 ntBASIC-0.3□□□□□ -2.46
ZKSCAN3Q9BRR0 Y_RNA.699-201ENST00000516803 93 ntBASIC-0.3□□□□□ -2.46
ZKSCAN3Q9BRR0 MIR5589-201ENST00000579442 60 ntBASIC-0.3□□□□□ -2.46
ZKSCAN3Q9BRR0 RNU6-721P-201ENST00000410155 105 ntBASIC-0.32□□□□□ -2.46
ZKSCAN3Q9BRR0 AP002795.1-201ENST00000534879 84 ntBASIC-0.32□□□□□ -2.46
ZKSCAN3Q9BRR0 MIR1468-201ENST00000410600 86 ntBASIC-0.33□□□□□ -2.46
ZKSCAN3Q9BRR0 MIR4802-201ENST00000581881 80 ntBASIC-0.33□□□□□ -2.46
ZKSCAN3Q9BRR0 MIR4645-201ENST00000583158 77 ntBASIC-0.34□□□□□ -2.46
ZKSCAN3Q9BRR0 SNORA27.2-201ENST00000363365 126 ntBASIC-0.35□□□□□ -2.47
ZKSCAN3Q9BRR0 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.35□□□□□ -2.47
ZKSCAN3Q9BRR0 MIR4636-201ENST00000582271 80 ntBASIC-0.35□□□□□ -2.47
ZKSCAN3Q9BRR0 RNU6-838P-201ENST00000363399 108 ntBASIC-0.37□□□□□ -2.47
ZKSCAN3Q9BRR0 SNORD114-28-201ENST00000363610 72 ntBASIC-0.37□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 186.9 ms