Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC-6.44□□□□□ -3.44
VPS13AQ96RL7 MIR3913-1-201ENST00000577744 102 ntBASIC-6.44□□□□□ -3.44
VPS13AQ96RL7 AC006160.2-201ENST00000637708 154 ntBASIC-6.45□□□□□ -3.44
VPS13AQ96RL7 AC006927.3-201ENST00000638789 384 ntBASIC-6.45□□□□□ -3.44
VPS13AQ96RL7 Y_RNA.84-201ENST00000363011 104 ntBASIC-6.45□□□□□ -3.44
VPS13AQ96RL7 RNU6-959P-201ENST00000384671 107 ntBASIC-6.45□□□□□ -3.44
VPS13AQ96RL7 RNU6-413P-201ENST00000384115 107 ntBASIC-6.46□□□□□ -3.44
VPS13AQ96RL7 MIR4511-201ENST00000582784 87 ntBASIC-6.46□□□□□ -3.44
VPS13AQ96RL7 MIR514A2-201ENST00000385131 88 ntBASIC-6.47□□□□□ -3.44
VPS13AQ96RL7 MIR514A3-201ENST00000385132 88 ntBASIC-6.47□□□□□ -3.44
VPS13AQ96RL7 SNORA25.4-201ENST00000363666 124 ntBASIC-6.48□□□□□ -3.45
VPS13AQ96RL7 AC110620.1-201ENST00000416042 228 ntBASIC-6.48□□□□□ -3.45
VPS13AQ96RL7 RNU6-566P-201ENST00000516790 107 ntBASIC-6.48□□□□□ -3.45
VPS13AQ96RL7 SNORD116-22-201ENST00000384430 92 ntBASIC-6.49□□□□□ -3.45
VPS13AQ96RL7 Y_RNA.599-201ENST00000410489 109 ntBASIC-6.49□□□□□ -3.45
VPS13AQ96RL7 AC099799.1-201ENST00000439809 192 ntBASIC-6.49□□□□□ -3.45
VPS13AQ96RL7 MTND3P10-201ENST00000450967 341 ntBASIC-6.49□□□□□ -3.45
VPS13AQ96RL7 U2.14-201ENST00000615943 113 ntBASIC-6.5□□□□□ -3.45
VPS13AQ96RL7 MTND2P23-201ENST00000422990 651 ntBASIC-6.51□□□□□ -3.45
VPS13AQ96RL7 RNU6-1227P-201ENST00000383981 107 ntBASIC-6.52□□□□□ -3.45
VPS13AQ96RL7 RNU6-497P-201ENST00000365316 104 ntBASIC-6.53□□□□□ -3.46
VPS13AQ96RL7 SNORA40.4-201ENST00000390971 128 ntBASIC-6.53□□□□□ -3.46
VPS13AQ96RL7 RNU6-673P-201ENST00000365084 104 ntBASIC-6.54□□□□□ -3.46
VPS13AQ96RL7 AC114801.3-201ENST00000510231 177 ntBASIC-6.54□□□□□ -3.46
VPS13AQ96RL7 SNORD42A-201ENST00000459584 64 ntBASIC-6.55□□□□□ -3.46
VPS13AQ96RL7 SNORA40.3-201ENST00000390964 122 ntBASIC-6.56□□□□□ -3.46
VPS13AQ96RL7 RNU7-121P-201ENST00000516604 62 ntBASIC-6.56□□□□□ -3.46
VPS13AQ96RL7 Y_RNA.607-201ENST00000410597 98 ntBASIC-6.57□□□□□ -3.46
VPS13AQ96RL7 MIR4679-1-201ENST00000637619 75 ntBASIC-6.57□□□□□ -3.46
VPS13AQ96RL7 RNU6-1042P-201ENST00000384204 107 ntBASIC-6.57□□□□□ -3.46
VPS13AQ96RL7 RNU6-460P-201ENST00000391158 108 ntBASIC-6.57□□□□□ -3.46
VPS13AQ96RL7 Y_RNA.154-201ENST00000363624 102 ntBASIC-6.58□□□□□ -3.46
VPS13AQ96RL7 Y_RNA.611-201ENST00000410682 108 ntBASIC-6.58□□□□□ -3.46
VPS13AQ96RL7 MIR4272-201ENST00000635924 64 ntBASIC-6.58□□□□□ -3.46
VPS13AQ96RL7 SNORD116.1-201ENST00000365628 92 ntBASIC-6.59□□□□□ -3.46
VPS13AQ96RL7 RNU6-1061P-201ENST00000516530 99 ntBASIC-6.59□□□□□ -3.46
VPS13AQ96RL7 AL158147.1-201ENST00000443970 75 ntBASIC-6.59□□□□□ -3.46
VPS13AQ96RL7 DNAJC19P2-201ENST00000593340 302 ntBASIC-6.59□□□□□ -3.46
VPS13AQ96RL7 Y_RNA.93-201ENST00000363066 109 ntBASIC-6.6□□□□□ -3.47
VPS13AQ96RL7 RNU6-931P-201ENST00000363850 107 ntBASIC-6.61□□□□□ -3.47
VPS13AQ96RL7 AL121895.2-201ENST00000619558 447 ntBASIC-6.61□□□□□ -3.47
VPS13AQ96RL7 SNORD116-12-201ENST00000384468 92 ntBASIC-6.62□□□□□ -3.47
VPS13AQ96RL7 SNORD33.1-201ENST00000516213 88 ntBASIC-6.62□□□□□ -3.47
VPS13AQ96RL7 AC104985.2-201ENST00000620598 500 ntBASIC-6.62□□□□□ -3.47
VPS13AQ96RL7 SNORD127-201ENST00000458892 86 ntBASIC-6.63□□□□□ -3.47
VPS13AQ96RL7 SNORD58C-201ENST00000365223 64 ntBASIC-6.63□□□□□ -3.47
VPS13AQ96RL7 MIR3134-201ENST00000579433 74 ntBASIC-6.63□□□□□ -3.47
VPS13AQ96RL7 Y_RNA.201-201ENST00000364052 96 ntBASIC-6.64□□□□□ -3.47
VPS13AQ96RL7 MIR548F5-201ENST00000408421 86 ntBASIC-6.65□□□□□ -3.47
VPS13AQ96RL7 AL445567.1-201ENST00000439121 144 ntBASIC-6.65□□□□□ -3.47
VPS13AQ96RL7 Y_RNA.292-201ENST00000364904 97 ntBASIC-6.65□□□□□ -3.47
VPS13AQ96RL7 RNU6-239P-201ENST00000390990 99 ntBASIC-6.66□□□□□ -3.48
VPS13AQ96RL7 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC-6.66□□□□□ -3.48
VPS13AQ96RL7 RNU6-883P-201ENST00000384597 107 ntBASIC-6.67□□□□□ -3.48
VPS13AQ96RL7 Y_RNA.818-201ENST00000618813 71 ntBASIC-6.67□□□□□ -3.48
VPS13AQ96RL7 RNU6-915P-201ENST00000364943 103 ntBASIC-6.68□□□□□ -3.48
VPS13AQ96RL7 RNY3P16-201ENST00000516338 101 ntBASIC-6.68□□□□□ -3.48
VPS13AQ96RL7 RNU6-446P-201ENST00000362827 106 ntBASIC-6.68□□□□□ -3.48
VPS13AQ96RL7 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC-6.68□□□□□ -3.48
VPS13AQ96RL7 Y_RNA.339-201ENST00000365325 102 ntBASIC-6.69□□□□□ -3.48
VPS13AQ96RL7 RNU6-219P-201ENST00000364728 107 ntBASIC-6.69□□□□□ -3.48
VPS13AQ96RL7 MIR548BB-201ENST00000626714 66 ntBASIC-6.69□□□□□ -3.48
VPS13AQ96RL7 SNORA40.14-201ENST00000516543 86 ntBASIC-6.7□□□□□ -3.48
VPS13AQ96RL7 MIR4999-201ENST00000585029 91 ntBASIC-6.7□□□□□ -3.48
VPS13AQ96RL7 AP001340.1-201ENST00000624405 217 ntBASIC-6.71□□□□□ -3.48
VPS13AQ96RL7 Y_RNA.107-201ENST00000363190 121 ntBASIC-6.72□□□□□ -3.48
VPS13AQ96RL7 SNORD113-4-201ENST00000364802 75 ntBASIC-6.72□□□□□ -3.48
VPS13AQ96RL7 SNORA19-201ENST00000384737 128 ntBASIC-6.72□□□□□ -3.49
VPS13AQ96RL7 MIR2052-201ENST00000636055 55 ntBASIC-6.73□□□□□ -3.49
VPS13AQ96RL7 Y_RNA.16-201ENST00000362421 102 ntBASIC-6.74□□□□□ -3.49
VPS13AQ96RL7 RNU6-121P-201ENST00000410525 99 ntBASIC-6.74□□□□□ -3.49
VPS13AQ96RL7 MIR4282-201ENST00000583613 67 ntBASIC-6.75□□□□□ -3.49
VPS13AQ96RL7 Y_RNA.788-201ENST00000622394 112 ntBASIC-6.75□□□□□ -3.49
VPS13AQ96RL7 Y_RNA.290-201ENST00000364879 114 ntBASIC-6.75□□□□□ -3.49
VPS13AQ96RL7 MIR590-201ENST00000385008 97 ntBASIC-6.75□□□□□ -3.49
VPS13AQ96RL7 U7.2-201ENST00000607576 63 ntBASIC-6.75□□□□□ -3.49
VPS13AQ96RL7 RNU6-539P-201ENST00000516665 103 ntBASIC-6.76□□□□□ -3.49
VPS13AQ96RL7 MT-TL1-201ENST00000386347 75 ntBASIC-6.77□□□□□ -3.49
VPS13AQ96RL7 RNU6-133P-201ENST00000383989 107 ntBASIC-6.77□□□□□ -3.49
VPS13AQ96RL7 RNU6-835P-201ENST00000516974 104 ntBASIC-6.79□□□□□ -3.5
VPS13AQ96RL7 NBR2-204ENST00000587322 63 ntBASIC-6.79□□□□□ -3.5
VPS13AQ96RL7 SNORD30.1-201ENST00000391309 70 ntBASIC-6.8□□□□□ -3.5
VPS13AQ96RL7 U6.103-201ENST00000637085 61 ntBASIC-6.8□□□□□ -3.5
VPS13AQ96RL7 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-6.8□□□□□ -3.5
VPS13AQ96RL7 Y_RNA.459-201ENST00000384251 102 ntBASIC-6.81□□□□□ -3.5
VPS13AQ96RL7 AC044792.1-201ENST00000593294 196 ntBASIC-6.81□□□□□ -3.5
VPS13AQ96RL7 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC-6.82□□□□□ -3.5
VPS13AQ96RL7 SNORA63.7-201ENST00000365579 123 ntBASIC-6.83□□□□□ -3.5
VPS13AQ96RL7 RNU6-1275P-201ENST00000391087 107 ntBASIC-6.84□□□□□ -3.5
VPS13AQ96RL7 MIR1302-5-201ENST00000408164 150 ntBASIC-6.85□□□□□ -3.51
VPS13AQ96RL7 RNU6-109P-201ENST00000516364 107 ntBASIC-6.85□□□□□ -3.51
VPS13AQ96RL7 RNU6-184P-201ENST00000516514 107 ntBASIC-6.85□□□□□ -3.51
VPS13AQ96RL7 RNU6-500P-201ENST00000362349 107 ntBASIC-6.86□□□□□ -3.51
VPS13AQ96RL7 U7.4-201ENST00000614961 63 ntBASIC-6.86□□□□□ -3.51
VPS13AQ96RL7 RNU6-753P-201ENST00000363926 107 ntBASIC-6.86□□□□□ -3.51
VPS13AQ96RL7 SNORD58B-201ENST00000607313 66 ntBASIC-6.86□□□□□ -3.51
VPS13AQ96RL7 MIR548F3-201ENST00000408509 87 ntBASIC-6.87□□□□□ -3.51
VPS13AQ96RL7 AL157777.2-201ENST00000258070 137 ntBASIC-6.88□□□□□ -3.51
VPS13AQ96RL7 RNU6-829P-201ENST00000363700 112 ntBASIC-6.88□□□□□ -3.51
VPS13AQ96RL7 SNORD116.3-201ENST00000517176 78 ntBASIC-6.88□□□□□ -3.51
Retrieved 100 of 98,524 protein–RNA pairs in 300.2 ms