Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 MT-TR-201ENST00000387439 65 ntBASIC-2.08□□□□□ -2.74
CCDC50Q8IVM0 RNU6-630P-201ENST00000391258 106 ntBASIC-2.08□□□□□ -2.74
CCDC50Q8IVM0 SNX3P1X-201ENST00000414887 175 ntBASIC-2.08□□□□□ -2.74
CCDC50Q8IVM0 MIR3671-201ENST00000580455 88 ntBASIC-2.08□□□□□ -2.74
CCDC50Q8IVM0 Y_RNA.225-201ENST00000364326 97 ntBASIC-2.09□□□□□ -2.74
CCDC50Q8IVM0 RNU6-1325P-201ENST00000364905 105 ntBASIC-2.11□□□□□ -2.75
CCDC50Q8IVM0 MIR630-201ENST00000384957 97 ntBASIC-2.11□□□□□ -2.75
CCDC50Q8IVM0 RNU6-695P-201ENST00000391157 104 ntBASIC-2.11□□□□□ -2.75
CCDC50Q8IVM0 U2.18-201ENST00000622185 84 ntBASIC-2.11□□□□□ -2.75
CCDC50Q8IVM0 MIR429-201ENST00000362106 83 ntBASIC-2.12□□□□□ -2.75
CCDC50Q8IVM0 RNU6-608P-201ENST00000383927 104 ntBASIC-2.12□□□□□ -2.75
CCDC50Q8IVM0 MIR520D-201ENST00000385002 87 ntBASIC-2.12□□□□□ -2.75
CCDC50Q8IVM0 RNU6-313P-201ENST00000516317 112 ntBASIC-2.13□□□□□ -2.75
CCDC50Q8IVM0 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.13□□□□□ -2.75
CCDC50Q8IVM0 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.15□□□□□ -2.75
CCDC50Q8IVM0 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-2.15□□□□□ -2.75
CCDC50Q8IVM0 MIR548M-201ENST00000408260 86 ntBASIC-2.15□□□□□ -2.75
CCDC50Q8IVM0 MTND4LP1-201ENST00000446263 157 ntBASIC-2.15□□□□□ -2.75
CCDC50Q8IVM0 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.15□□□□□ -2.75
CCDC50Q8IVM0 AC006160.2-201ENST00000637708 154 ntBASIC-2.15□□□□□ -2.75
CCDC50Q8IVM0 RNU6-640P-201ENST00000363693 105 ntBASIC-2.16□□□□□ -2.76
CCDC50Q8IVM0 RNU6-675P-201ENST00000384236 104 ntBASIC-2.16□□□□□ -2.76
CCDC50Q8IVM0 MIR664A-201ENST00000626086 82 ntBASIC-2.16□□□□□ -2.76
CCDC50Q8IVM0 Y_RNA.55-201ENST00000362797 102 ntBASIC-2.17□□□□□ -2.76
CCDC50Q8IVM0 RNU6-841P-201ENST00000383872 107 ntBASIC-2.17□□□□□ -2.76
CCDC50Q8IVM0 RNU6-980P-201ENST00000516925 103 ntBASIC-2.17□□□□□ -2.76
CCDC50Q8IVM0 MIR548AM-201ENST00000584298 74 ntBASIC-2.17□□□□□ -2.76
CCDC50Q8IVM0 MIR1297-201ENST00000637311 77 ntBASIC-2.17□□□□□ -2.76
CCDC50Q8IVM0 SNORD113.1-201ENST00000363280 73 ntBASIC-2.18□□□□□ -2.76
CCDC50Q8IVM0 Y_RNA.273-201ENST00000364703 102 ntBASIC-2.18□□□□□ -2.76
CCDC50Q8IVM0 SNORD113-2-201ENST00000391082 72 ntBASIC-2.18□□□□□ -2.76
CCDC50Q8IVM0 MIR3123-201ENST00000583417 75 ntBASIC-2.18□□□□□ -2.76
CCDC50Q8IVM0 RNU6-668P-201ENST00000364180 107 ntBASIC-2.19□□□□□ -2.76
CCDC50Q8IVM0 RNU6-844P-201ENST00000517175 102 ntBASIC-2.19□□□□□ -2.76
CCDC50Q8IVM0 Y_RNA.375-201ENST00000365625 101 ntBASIC-2.2□□□□□ -2.76
CCDC50Q8IVM0 SNORD45A-201ENST00000384512 84 ntBASIC-2.2□□□□□ -2.76
CCDC50Q8IVM0 RNA5SP405-201ENST00000363059 114 ntBASIC-2.21□□□□□ -2.76
CCDC50Q8IVM0 RNU6-755P-201ENST00000364400 103 ntBASIC-2.21□□□□□ -2.76
CCDC50Q8IVM0 Y_RNA.17-201ENST00000362433 111 ntBASIC-2.22□□□□□ -2.76
CCDC50Q8IVM0 SNORA63.4-201ENST00000362763 126 ntBASIC-2.22□□□□□ -2.76
CCDC50Q8IVM0 RNA5SP215-201ENST00000363440 122 ntBASIC-2.22□□□□□ -2.76
CCDC50Q8IVM0 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.22□□□□□ -2.76
CCDC50Q8IVM0 Y_RNA.413-201ENST00000384007 102 ntBASIC-2.22□□□□□ -2.76
CCDC50Q8IVM0 RNU6-1152P-201ENST00000384576 107 ntBASIC-2.22□□□□□ -2.76
CCDC50Q8IVM0 Y_RNA.754-201ENST00000476024 102 ntBASIC-2.22□□□□□ -2.76
CCDC50Q8IVM0 MIR8053-201ENST00000613344 75 ntBASIC-2.22□□□□□ -2.76
CCDC50Q8IVM0 Y_RNA.790-201ENST00000614282 102 ntBASIC-2.22□□□□□ -2.76
CCDC50Q8IVM0 Y_RNA.782-201ENST00000614695 102 ntBASIC-2.22□□□□□ -2.76
CCDC50Q8IVM0 RNU6-32P-201ENST00000383948 107 ntBASIC-2.23□□□□□ -2.77
CCDC50Q8IVM0 RNU6-13P-201ENST00000384248 107 ntBASIC-2.23□□□□□ -2.77
CCDC50Q8IVM0 RNU6-12P-201ENST00000384604 107 ntBASIC-2.23□□□□□ -2.77
CCDC50Q8IVM0 RNU6-41P-201ENST00000384741 107 ntBASIC-2.23□□□□□ -2.77
CCDC50Q8IVM0 RNU6-1267P-201ENST00000410747 107 ntBASIC-2.23□□□□□ -2.77
CCDC50Q8IVM0 RNU4-88P-201ENST00000411220 86 ntBASIC-2.23□□□□□ -2.77
CCDC50Q8IVM0 snoMBII-202.2-201ENST00000517263 86 ntBASIC-2.23□□□□□ -2.77
CCDC50Q8IVM0 SNORD116-16-201ENST00000384533 92 ntBASIC-2.24□□□□□ -2.77
CCDC50Q8IVM0 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.24□□□□□ -2.77
CCDC50Q8IVM0 RNU6-380P-201ENST00000410207 107 ntBASIC-2.24□□□□□ -2.77
CCDC50Q8IVM0 RNU6-118P-201ENST00000516552 102 ntBASIC-2.24□□□□□ -2.77
CCDC50Q8IVM0 Y_RNA.73-201ENST00000362910 113 ntBASIC-2.25□□□□□ -2.77
CCDC50Q8IVM0 RNY4P27-201ENST00000363341 96 ntBASIC-2.25□□□□□ -2.77
CCDC50Q8IVM0 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.25□□□□□ -2.77
CCDC50Q8IVM0 SNORA41B-201ENST00000384785 128 ntBASIC-2.25□□□□□ -2.77
CCDC50Q8IVM0 MIR3910-1-201ENST00000580936 111 ntBASIC-2.25□□□□□ -2.77
CCDC50Q8IVM0 MIR3170-201ENST00000582699 77 ntBASIC-2.25□□□□□ -2.77
CCDC50Q8IVM0 RNU6-194P-201ENST00000363862 105 ntBASIC-2.26□□□□□ -2.77
CCDC50Q8IVM0 RNU6-147P-201ENST00000383983 107 ntBASIC-2.26□□□□□ -2.77
CCDC50Q8IVM0 Y_RNA.607-201ENST00000410597 98 ntBASIC-2.26□□□□□ -2.77
CCDC50Q8IVM0 U4.2-201ENST00000618561 85 ntBASIC-2.26□□□□□ -2.77
CCDC50Q8IVM0 RNU6-1134P-201ENST00000365156 101 ntBASIC-2.27□□□□□ -2.77
CCDC50Q8IVM0 RNU6-1111P-201ENST00000391118 107 ntBASIC-2.27□□□□□ -2.77
CCDC50Q8IVM0 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.27□□□□□ -2.77
CCDC50Q8IVM0 Y_RNA.593-201ENST00000410292 98 ntBASIC-2.27□□□□□ -2.77
CCDC50Q8IVM0 MIR3139-201ENST00000579145 76 ntBASIC-2.27□□□□□ -2.77
CCDC50Q8IVM0 MIR548AA1-201ENST00000384971 97 ntBASIC-2.28□□□□□ -2.77
CCDC50Q8IVM0 RNU6-563P-201ENST00000364872 108 ntBASIC-2.29□□□□□ -2.78
CCDC50Q8IVM0 SNORD114-3-201ENST00000364969 75 ntBASIC-2.29□□□□□ -2.78
CCDC50Q8IVM0 SNORD1B-201ENST00000363091 84 ntBASIC-2.3□□□□□ -2.78
CCDC50Q8IVM0 RNU6-1247P-201ENST00000516622 98 ntBASIC-2.3□□□□□ -2.78
CCDC50Q8IVM0 AC120024.2-201ENST00000576526 175 ntBASIC-2.3□□□□□ -2.78
CCDC50Q8IVM0 MIR23C-201ENST00000579846 100 ntBASIC-2.3□□□□□ -2.78
CCDC50Q8IVM0 RNU6-315P-201ENST00000362666 107 ntBASIC-2.31□□□□□ -2.78
CCDC50Q8IVM0 Y_RNA.316-201ENST00000365118 111 ntBASIC-2.32□□□□□ -2.78
CCDC50Q8IVM0 RNU6-258P-201ENST00000390884 101 ntBASIC-2.32□□□□□ -2.78
CCDC50Q8IVM0 MIR1468-201ENST00000410600 86 ntBASIC-2.32□□□□□ -2.78
CCDC50Q8IVM0 IGLL4P-201ENST00000614590 133 ntBASIC-2.32□□□□□ -2.78
CCDC50Q8IVM0 RNU6-247P-201ENST00000362636 107 ntBASIC-2.34□□□□□ -2.78
CCDC50Q8IVM0 RNY1P1-201ENST00000364372 112 ntBASIC-2.34□□□□□ -2.78
CCDC50Q8IVM0 RNU6-49P-201ENST00000384256 107 ntBASIC-2.34□□□□□ -2.78
CCDC50Q8IVM0 MIR5588-201ENST00000581890 63 ntBASIC-2.34□□□□□ -2.78
CCDC50Q8IVM0 RNU6-1094P-201ENST00000362416 104 ntBASIC-2.35□□□□□ -2.79
CCDC50Q8IVM0 RNA5SP173-201ENST00000364857 136 ntBASIC-2.35□□□□□ -2.79
CCDC50Q8IVM0 RNU6-1131P-201ENST00000364955 107 ntBASIC-2.35□□□□□ -2.79
CCDC50Q8IVM0 RNU6-1034P-201ENST00000365335 101 ntBASIC-2.35□□□□□ -2.79
CCDC50Q8IVM0 Y_RNA.629-201ENST00000411368 105 ntBASIC-2.35□□□□□ -2.79
CCDC50Q8IVM0 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.35□□□□□ -2.79
CCDC50Q8IVM0 RNU6-119P-201ENST00000364882 107 ntBASIC-2.36□□□□□ -2.79
CCDC50Q8IVM0 RNU6-1241P-201ENST00000384536 107 ntBASIC-2.36□□□□□ -2.79
CCDC50Q8IVM0 RNU6-1081P-201ENST00000384537 107 ntBASIC-2.36□□□□□ -2.79
CCDC50Q8IVM0 MT-TM-201ENST00000387377 68 ntBASIC-2.36□□□□□ -2.79
Retrieved 100 of 98,524 protein–RNA pairs in 166.1 ms