Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 RNU6-915P-201ENST00000364943 103 ntBASIC-2.37□□□□□ -2.79
PRKDCP78527 Y_RNA.632-201ENST00000459189 102 ntBASIC-2.37□□□□□ -2.79
PRKDCP78527 RNU6-450P-201ENST00000364654 107 ntBASIC-2.38□□□□□ -2.79
PRKDCP78527 RNU6-422P-201ENST00000384632 107 ntBASIC-2.38□□□□□ -2.79
PRKDCP78527 RNU6-887P-201ENST00000410660 100 ntBASIC-2.38□□□□□ -2.79
PRKDCP78527 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-2.38□□□□□ -2.79
PRKDCP78527 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-2.39□□□□□ -2.79
PRKDCP78527 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-2.39□□□□□ -2.79
PRKDCP78527 SNORA63.4-201ENST00000362763 126 ntBASIC-2.39□□□□□ -2.79
PRKDCP78527 Y_RNA.69-201ENST00000362885 109 ntBASIC-2.39□□□□□ -2.79
PRKDCP78527 RNU4-71P-201ENST00000516258 113 ntBASIC-2.39□□□□□ -2.79
PRKDCP78527 RNU6-795P-201ENST00000516323 103 ntBASIC-2.39□□□□□ -2.79
PRKDCP78527 AC113195.1-201ENST00000579952 141 ntBASIC-2.39□□□□□ -2.79
PRKDCP78527 AP001318.4-201ENST00000616637 121 ntBASIC-2.39□□□□□ -2.79
PRKDCP78527 Y_RNA.626-201ENST00000411288 95 ntBASIC-2.39□□□□□ -2.79
PRKDCP78527 AL160413.1-201ENST00000622780 310 ntBASIC-2.39□□□□□ -2.79
PRKDCP78527 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC-2.4□□□□□ -2.79
PRKDCP78527 AL451105.1-201ENST00000450005 189 ntBASIC-2.4□□□□□ -2.79
PRKDCP78527 RNU6-904P-201ENST00000516206 101 ntBASIC-2.4□□□□□ -2.79
PRKDCP78527 RNU6-330P-201ENST00000363015 107 ntBASIC-2.4□□□□□ -2.79
PRKDCP78527 SNORA63-201ENST00000363450 132 ntBASIC-2.4□□□□□ -2.79
PRKDCP78527 RNU6-196P-201ENST00000384315 107 ntBASIC-2.41□□□□□ -2.79
PRKDCP78527 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-2.41□□□□□ -2.79
PRKDCP78527 Y_RNA.382-201ENST00000365672 114 ntBASIC-2.42□□□□□ -2.8
PRKDCP78527 RNU6-713P-201ENST00000384761 107 ntBASIC-2.42□□□□□ -2.8
PRKDCP78527 SNORD45A-201ENST00000384512 84 ntBASIC-2.42□□□□□ -2.8
PRKDCP78527 Y_RNA.197-201ENST00000364004 102 ntBASIC-2.43□□□□□ -2.8
PRKDCP78527 RNU6-380P-201ENST00000410207 107 ntBASIC-2.43□□□□□ -2.8
PRKDCP78527 RNU6-940P-201ENST00000363433 104 ntBASIC-2.43□□□□□ -2.8
PRKDCP78527 Y_RNA.15-201ENST00000362420 102 ntBASIC-2.43□□□□□ -2.8
PRKDCP78527 RNU6-1124P-201ENST00000384169 107 ntBASIC-2.43□□□□□ -2.8
PRKDCP78527 SNORD116.2-201ENST00000391251 93 ntBASIC-2.43□□□□□ -2.8
PRKDCP78527 RNU6-1206P-201ENST00000516339 103 ntBASIC-2.43□□□□□ -2.8
PRKDCP78527 RNA5SP449-201ENST00000516871 130 ntBASIC-2.43□□□□□ -2.8
PRKDCP78527 MIRLET7A1-201ENST00000362295 80 ntBASIC-2.44□□□□□ -2.8
PRKDCP78527 Y_RNA.516-201ENST00000384541 124 ntBASIC-2.44□□□□□ -2.8
PRKDCP78527 AL157777.2-201ENST00000258070 137 ntBASIC-2.44□□□□□ -2.8
PRKDCP78527 RNU6-854P-201ENST00000364036 107 ntBASIC-2.44□□□□□ -2.8
PRKDCP78527 Y_RNA.206-201ENST00000364136 102 ntBASIC-2.44□□□□□ -2.8
PRKDCP78527 RNU6-1219P-201ENST00000516143 112 ntBASIC-2.44□□□□□ -2.8
PRKDCP78527 Y_RNA.11-201ENST00000362375 109 ntBASIC-2.45□□□□□ -2.8
PRKDCP78527 RNU6-419P-201ENST00000517030 63 ntBASIC-2.45□□□□□ -2.8
PRKDCP78527 Y_RNA.70-201ENST00000362886 110 ntBASIC-2.45□□□□□ -2.8
PRKDCP78527 RNU6-918P-201ENST00000391219 106 ntBASIC-2.45□□□□□ -2.8
PRKDCP78527 SNORD58.1-201ENST00000391313 66 ntBASIC-2.46□□□□□ -2.8
PRKDCP78527 MTATP8P2-201ENST00000435212 202 ntBASIC-2.46□□□□□ -2.8
PRKDCP78527 RNU6-70P-201ENST00000516438 60 ntBASIC-2.46□□□□□ -2.8
PRKDCP78527 RNU6-742P-201ENST00000365289 107 ntBASIC-2.46□□□□□ -2.8
PRKDCP78527 Y_RNA.210-201ENST00000364161 110 ntBASIC-2.47□□□□□ -2.8
PRKDCP78527 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-2.47□□□□□ -2.8
PRKDCP78527 Y_RNA.26-201ENST00000362539 101 ntBASIC-2.47□□□□□ -2.8
PRKDCP78527 SNORD58C-201ENST00000365223 64 ntBASIC-2.48□□□□□ -2.81
PRKDCP78527 AC074348.1-201ENST00000426503 132 ntBASIC-2.48□□□□□ -2.81
PRKDCP78527 MIR124-1-201ENST00000385275 85 ntBASIC-2.48□□□□□ -2.81
PRKDCP78527 Y_RNA.662-201ENST00000516028 97 ntBASIC-2.48□□□□□ -2.81
PRKDCP78527 RNA5SP224-201ENST00000365069 126 ntBASIC-2.49□□□□□ -2.81
PRKDCP78527 MIR4668-201ENST00000582284 70 ntBASIC-2.49□□□□□ -2.81
PRKDCP78527 MIR3974-201ENST00000637126 96 ntBASIC-2.49□□□□□ -2.81
PRKDCP78527 Y_RNA.260-201ENST00000364628 101 ntBASIC-2.49□□□□□ -2.81
PRKDCP78527 RNU6-1134P-201ENST00000365156 101 ntBASIC-2.49□□□□□ -2.81
PRKDCP78527 RNU6-1135P-201ENST00000411083 103 ntBASIC-2.49□□□□□ -2.81
PRKDCP78527 SNORD116-4-201ENST00000384733 96 ntBASIC-2.49□□□□□ -2.81
PRKDCP78527 AL158147.1-201ENST00000443970 75 ntBASIC-2.5□□□□□ -2.81
PRKDCP78527 MIR8062-201ENST00000621515 85 ntBASIC-2.5□□□□□ -2.81
PRKDCP78527 MIR154-201ENST00000385243 84 ntBASIC-2.5□□□□□ -2.81
PRKDCP78527 MT-TL1-201ENST00000386347 75 ntBASIC-2.5□□□□□ -2.81
PRKDCP78527 Y_RNA.160-201ENST00000363677 92 ntBASIC-2.51□□□□□ -2.81
PRKDCP78527 MIR656-201ENST00000385224 78 ntBASIC-2.51□□□□□ -2.81
PRKDCP78527 RNU6-772P-201ENST00000516042 105 ntBASIC-2.51□□□□□ -2.81
PRKDCP78527 RNU6-718P-201ENST00000516166 105 ntBASIC-2.51□□□□□ -2.81
PRKDCP78527 AC006160.2-201ENST00000637708 154 ntBASIC-2.51□□□□□ -2.81
PRKDCP78527 RNU6-402P-201ENST00000410678 103 ntBASIC-2.51□□□□□ -2.81
PRKDCP78527 Y_RNA.818-201ENST00000618813 71 ntBASIC-2.52□□□□□ -2.81
PRKDCP78527 RNU6-776P-201ENST00000364403 104 ntBASIC-2.52□□□□□ -2.81
PRKDCP78527 Y_RNA.277-201ENST00000364754 102 ntBASIC-2.52□□□□□ -2.81
PRKDCP78527 RNU6-1022P-201ENST00000365049 104 ntBASIC-2.52□□□□□ -2.81
PRKDCP78527 RNU4-40P-201ENST00000364351 143 ntBASIC-2.53□□□□□ -2.81
PRKDCP78527 Y_RNA.272-201ENST00000364696 102 ntBASIC-2.53□□□□□ -2.81
PRKDCP78527 RNY3P1-201ENST00000365085 102 ntBASIC-2.53□□□□□ -2.81
PRKDCP78527 SNORD19B-201ENST00000459623 84 ntBASIC-2.53□□□□□ -2.81
PRKDCP78527 Y_RNA.200-201ENST00000364018 102 ntBASIC-2.53□□□□□ -2.82
PRKDCP78527 SNORA40B-201ENST00000385573 128 ntBASIC-2.53□□□□□ -2.82
PRKDCP78527 Y_RNA.93-201ENST00000363066 109 ntBASIC-2.54□□□□□ -2.82
PRKDCP78527 U7.3-201ENST00000616123 62 ntBASIC-2.54□□□□□ -2.82
PRKDCP78527 Y_RNA.20-201ENST00000362479 113 ntBASIC-2.54□□□□□ -2.82
PRKDCP78527 SNORD116-22-201ENST00000384430 92 ntBASIC-2.54□□□□□ -2.82
PRKDCP78527 RNU6-788P-201ENST00000390967 104 ntBASIC-2.55□□□□□ -2.82
PRKDCP78527 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-2.55□□□□□ -2.82
PRKDCP78527 Y_RNA.335-201ENST00000365299 96 ntBASIC-2.56□□□□□ -2.82
PRKDCP78527 Y_RNA.717-201ENST00000517106 92 ntBASIC-2.56□□□□□ -2.82
PRKDCP78527 RNU6-985P-201ENST00000410182 104 ntBASIC-2.56□□□□□ -2.82
PRKDCP78527 RNU6-635P-201ENST00000516651 102 ntBASIC-2.56□□□□□ -2.82
PRKDCP78527 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-2.57□□□□□ -2.82
PRKDCP78527 Y_RNA.107-201ENST00000363190 121 ntBASIC-2.57□□□□□ -2.82
PRKDCP78527 Y_RNA.532-201ENST00000384590 113 ntBASIC-2.57□□□□□ -2.82
PRKDCP78527 RNU6-231P-201ENST00000517122 103 ntBASIC-2.57□□□□□ -2.82
PRKDCP78527 Y_RNA.318-201ENST00000365131 97 ntBASIC-2.57□□□□□ -2.82
PRKDCP78527 RNU6-659P-201ENST00000516454 104 ntBASIC-2.57□□□□□ -2.82
PRKDCP78527 Y_RNA.165-201ENST00000363721 102 ntBASIC-2.57□□□□□ -2.82
PRKDCP78527 RNU6-633P-201ENST00000362612 103 ntBASIC-2.58□□□□□ -2.82
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms