Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 RNU6-587P-201ENST00000391282 106 ntBASIC-2.24□□□□□ -2.77
RFC3P40938 MIR548W-201ENST00000581970 74 ntBASIC-2.24□□□□□ -2.77
RFC3P40938 MIR3675-201ENST00000583661 73 ntBASIC-2.24□□□□□ -2.77
RFC3P40938 RNU6-330P-201ENST00000363015 107 ntBASIC-2.25□□□□□ -2.77
RFC3P40938 RNU6-624P-201ENST00000363411 107 ntBASIC-2.25□□□□□ -2.77
RFC3P40938 RNU6-106P-201ENST00000384405 107 ntBASIC-2.25□□□□□ -2.77
RFC3P40938 RNU6-554P-201ENST00000410466 106 ntBASIC-2.25□□□□□ -2.77
RFC3P40938 RNU6-982P-201ENST00000516216 102 ntBASIC-2.25□□□□□ -2.77
RFC3P40938 RNU6-766P-201ENST00000362478 107 ntBASIC-2.26□□□□□ -2.77
RFC3P40938 RNU6-633P-201ENST00000362612 103 ntBASIC-2.26□□□□□ -2.77
RFC3P40938 RNU6-604P-201ENST00000390917 100 ntBASIC-2.26□□□□□ -2.77
RFC3P40938 snoU13.10-201ENST00000459301 103 ntBASIC-2.26□□□□□ -2.77
RFC3P40938 MIR3170-201ENST00000582699 77 ntBASIC-2.26□□□□□ -2.77
RFC3P40938 Y_RNA.781-201ENST00000620301 103 ntBASIC-2.26□□□□□ -2.77
RFC3P40938 RNU6-247P-201ENST00000362636 107 ntBASIC-2.28□□□□□ -2.77
RFC3P40938 RNU6-698P-201ENST00000363523 107 ntBASIC-2.28□□□□□ -2.77
RFC3P40938 RNU6-34P-201ENST00000364874 107 ntBASIC-2.28□□□□□ -2.77
RFC3P40938 SNORA8.1-201ENST00000384250 140 ntBASIC-2.28□□□□□ -2.77
RFC3P40938 RNY4-201ENST00000516507 96 ntBASIC-2.28□□□□□ -2.77
RFC3P40938 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-2.28□□□□□ -2.77
RFC3P40938 Y_RNA.290-201ENST00000364879 114 ntBASIC-2.29□□□□□ -2.78
RFC3P40938 RNU6-1267P-201ENST00000410747 107 ntBASIC-2.29□□□□□ -2.78
RFC3P40938 MIR548V-201ENST00000584165 80 ntBASIC-2.29□□□□□ -2.78
RFC3P40938 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.29□□□□□ -2.78
RFC3P40938 FTX_4.1-201ENST00000616291 147 ntBASIC-2.29□□□□□ -2.78
RFC3P40938 U4.4-201ENST00000620626 117 ntBASIC-2.29□□□□□ -2.78
RFC3P40938 SNORD45.1-201ENST00000363181 77 ntBASIC-2.3□□□□□ -2.78
RFC3P40938 Y_RNA.501-201ENST00000384467 103 ntBASIC-2.3□□□□□ -2.78
RFC3P40938 Y_RNA.513-201ENST00000384522 100 ntBASIC-2.3□□□□□ -2.78
RFC3P40938 AC093729.1-201ENST00000513074 128 ntBASIC-2.3□□□□□ -2.78
RFC3P40938 Y_RNA.699-201ENST00000516803 93 ntBASIC-2.31□□□□□ -2.78
RFC3P40938 RNU6-303P-201ENST00000517091 106 ntBASIC-2.31□□□□□ -2.78
RFC3P40938 MIR4668-201ENST00000582284 70 ntBASIC-2.31□□□□□ -2.78
RFC3P40938 MIR4719-201ENST00000585233 84 ntBASIC-2.31□□□□□ -2.78
RFC3P40938 Y_RNA.186-201ENST00000363899 92 ntBASIC-2.32□□□□□ -2.78
RFC3P40938 SNORA19-201ENST00000384737 128 ntBASIC-2.32□□□□□ -2.78
RFC3P40938 MIR548AA1-201ENST00000384971 97 ntBASIC-2.32□□□□□ -2.78
RFC3P40938 RNU6-557P-201ENST00000516842 110 ntBASIC-2.32□□□□□ -2.78
RFC3P40938 RNY4P9-201ENST00000363194 97 ntBASIC-2.33□□□□□ -2.78
RFC3P40938 Y_RNA.313-201ENST00000365095 103 ntBASIC-2.33□□□□□ -2.78
RFC3P40938 Y_RNA.544-201ENST00000384650 113 ntBASIC-2.33□□□□□ -2.78
RFC3P40938 MIR630-201ENST00000384957 97 ntBASIC-2.34□□□□□ -2.78
RFC3P40938 AC013734.1-201ENST00000619329 111 ntBASIC-2.34□□□□□ -2.78
RFC3P40938 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.34□□□□□ -2.78
RFC3P40938 U6.97-201ENST00000636904 101 ntBASIC-2.34□□□□□ -2.78
RFC3P40938 RNU6-1079P-201ENST00000362861 110 ntBASIC-2.35□□□□□ -2.79
RFC3P40938 MIR2052-201ENST00000636055 55 ntBASIC-2.36□□□□□ -2.79
RFC3P40938 AC099654.10-201ENST00000640395 161 ntBASIC-2.36□□□□□ -2.79
RFC3P40938 RNU6-141P-201ENST00000410499 105 ntBASIC-2.37□□□□□ -2.79
RFC3P40938 RNU6-1081P-201ENST00000384537 107 ntBASIC-2.38□□□□□ -2.79
RFC3P40938 Y_RNA.620-201ENST00000411009 88 ntBASIC-2.38□□□□□ -2.79
RFC3P40938 AC074348.1-201ENST00000426503 132 ntBASIC-2.38□□□□□ -2.79
RFC3P40938 MTND4LP1-201ENST00000446263 157 ntBASIC-2.38□□□□□ -2.79
RFC3P40938 SNORD113-2-201ENST00000391082 72 ntBASIC-2.39□□□□□ -2.79
RFC3P40938 AC005520.4-201ENST00000604337 90 ntBASIC-2.39□□□□□ -2.79
RFC3P40938 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-2.39□□□□□ -2.79
RFC3P40938 RNU6-686P-201ENST00000364839 107 ntBASIC-2.4□□□□□ -2.79
RFC3P40938 AC097484.2-201ENST00000509147 251 ntBASIC-2.4□□□□□ -2.79
RFC3P40938 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-2.4□□□□□ -2.79
RFC3P40938 SNX3P1Y-201ENST00000615757 176 ntBASIC-2.4□□□□□ -2.79
RFC3P40938 Y_RNA.261-201ENST00000364631 102 ntBASIC-2.41□□□□□ -2.8
RFC3P40938 SNORD116-16-201ENST00000384533 92 ntBASIC-2.41□□□□□ -2.8
RFC3P40938 RNU6-995P-201ENST00000391244 107 ntBASIC-2.41□□□□□ -2.8
RFC3P40938 MIRLET7A2-201ENST00000362105 72 ntBASIC-2.42□□□□□ -2.8
RFC3P40938 SNORA27.2-201ENST00000363365 126 ntBASIC-2.42□□□□□ -2.8
RFC3P40938 SNORD116-22-201ENST00000384430 92 ntBASIC-2.42□□□□□ -2.8
RFC3P40938 AC008267.6-201ENST00000441664 139 ntBASIC-2.42□□□□□ -2.8
RFC3P40938 RNU6-668P-201ENST00000364180 107 ntBASIC-2.43□□□□□ -2.8
RFC3P40938 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-2.43□□□□□ -2.8
RFC3P40938 SNORD63.2-201ENST00000516303 64 ntBASIC-2.43□□□□□ -2.8
RFC3P40938 MIR4484-201ENST00000582855 83 ntBASIC-2.43□□□□□ -2.8
RFC3P40938 SNORD1B-201ENST00000363091 84 ntBASIC-2.44□□□□□ -2.8
RFC3P40938 RNA5SP215-201ENST00000363440 122 ntBASIC-2.44□□□□□ -2.8
RFC3P40938 RNU6-1325P-201ENST00000364905 105 ntBASIC-2.44□□□□□ -2.8
RFC3P40938 Y_RNA.647-201ENST00000459194 112 ntBASIC-2.44□□□□□ -2.8
RFC3P40938 Y_RNA.640-201ENST00000459296 112 ntBASIC-2.44□□□□□ -2.8
RFC3P40938 RNU6-589P-201ENST00000516485 107 ntBASIC-2.44□□□□□ -2.8
RFC3P40938 Y_RNA.803-201ENST00000614432 112 ntBASIC-2.44□□□□□ -2.8
RFC3P40938 Y_RNA.815-201ENST00000616655 112 ntBASIC-2.44□□□□□ -2.8
RFC3P40938 Y_RNA.795-201ENST00000619475 112 ntBASIC-2.44□□□□□ -2.8
RFC3P40938 Y_RNA.827-201ENST00000638104 112 ntBASIC-2.44□□□□□ -2.8
RFC3P40938 RNU6-497P-201ENST00000365316 104 ntBASIC-2.45□□□□□ -2.8
RFC3P40938 RNU6-669P-201ENST00000365575 107 ntBASIC-2.45□□□□□ -2.8
RFC3P40938 Y_RNA.519-201ENST00000384553 102 ntBASIC-2.45□□□□□ -2.8
RFC3P40938 Y_RNA.532-201ENST00000384590 113 ntBASIC-2.45□□□□□ -2.8
RFC3P40938 RNU6-959P-201ENST00000384671 107 ntBASIC-2.45□□□□□ -2.8
RFC3P40938 RNY3P8-201ENST00000411366 126 ntBASIC-2.45□□□□□ -2.8
RFC3P40938 RNU6-803P-201ENST00000516034 102 ntBASIC-2.45□□□□□ -2.8
RFC3P40938 RNU7-151P-201ENST00000516930 53 ntBASIC-2.45□□□□□ -2.8
RFC3P40938 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-2.45□□□□□ -2.8
RFC3P40938 MTRNR2L9-201ENST00000622562 75 ntBASIC-2.45□□□□□ -2.8
RFC3P40938 MIRLET7A1-201ENST00000362295 80 ntBASIC-2.46□□□□□ -2.8
RFC3P40938 RNU6-219P-201ENST00000364728 107 ntBASIC-2.46□□□□□ -2.8
RFC3P40938 MIR579-201ENST00000385221 98 ntBASIC-2.46□□□□□ -2.8
RFC3P40938 Y_RNA.703-201ENST00000516846 111 ntBASIC-2.46□□□□□ -2.8
RFC3P40938 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-2.46□□□□□ -2.8
RFC3P40938 SNORA41B-201ENST00000384785 128 ntBASIC-2.47□□□□□ -2.8
RFC3P40938 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-2.47□□□□□ -2.8
RFC3P40938 MIR548BB-201ENST00000626714 66 ntBASIC-2.47□□□□□ -2.8
RFC3P40938 Y_RNA.219-201ENST00000364232 113 ntBASIC-2.48□□□□□ -2.81
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms