Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 RNU6-327P-201ENST00000516270 127 ntBASIC-2.59□□□□□ -2.82
HLA-DMBP28068 AC005520.4-201ENST00000604337 90 ntBASIC-2.59□□□□□ -2.82
HLA-DMBP28068 RNA5SP215-201ENST00000363440 122 ntBASIC-2.6□□□□□ -2.83
HLA-DMBP28068 Y_RNA.257-201ENST00000364596 102 ntBASIC-2.6□□□□□ -2.83
HLA-DMBP28068 SNORD113-2-201ENST00000391082 72 ntBASIC-2.6□□□□□ -2.83
HLA-DMBP28068 AC093729.1-201ENST00000513074 128 ntBASIC-2.6□□□□□ -2.83
HLA-DMBP28068 MIR630-201ENST00000384957 97 ntBASIC-2.61□□□□□ -2.83
HLA-DMBP28068 RNU6-886P-201ENST00000384319 105 ntBASIC-2.62□□□□□ -2.83
HLA-DMBP28068 MTND4LP1-201ENST00000446263 157 ntBASIC-2.62□□□□□ -2.83
HLA-DMBP28068 RNU6-109P-201ENST00000516364 107 ntBASIC-2.62□□□□□ -2.83
HLA-DMBP28068 RNU6-184P-201ENST00000516514 107 ntBASIC-2.62□□□□□ -2.83
HLA-DMBP28068 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-2.62□□□□□ -2.83
HLA-DMBP28068 RNU6-1094P-201ENST00000362416 104 ntBASIC-2.63□□□□□ -2.83
HLA-DMBP28068 SNORA27.2-201ENST00000363365 126 ntBASIC-2.63□□□□□ -2.83
HLA-DMBP28068 RNU6-1081P-201ENST00000384537 107 ntBASIC-2.63□□□□□ -2.83
HLA-DMBP28068 SNORD1B-201ENST00000363091 84 ntBASIC-2.64□□□□□ -2.83
HLA-DMBP28068 Y_RNA.218-201ENST00000364218 104 ntBASIC-2.64□□□□□ -2.83
HLA-DMBP28068 Y_RNA.290-201ENST00000364879 114 ntBASIC-2.64□□□□□ -2.83
HLA-DMBP28068 AC097484.2-201ENST00000509147 251 ntBASIC-2.64□□□□□ -2.83
HLA-DMBP28068 RNU6-388P-201ENST00000517012 105 ntBASIC-2.64□□□□□ -2.83
HLA-DMBP28068 RNU6-389P-201ENST00000517048 105 ntBASIC-2.64□□□□□ -2.83
HLA-DMBP28068 MTRNR2L9-201ENST00000622562 75 ntBASIC-2.64□□□□□ -2.83
HLA-DMBP28068 RNU6-686P-201ENST00000364839 107 ntBASIC-2.65□□□□□ -2.83
HLA-DMBP28068 MIR4668-201ENST00000582284 70 ntBASIC-2.65□□□□□ -2.83
HLA-DMBP28068 RNA5SP173-201ENST00000364857 136 ntBASIC-2.66□□□□□ -2.84
HLA-DMBP28068 RNU6-995P-201ENST00000391244 107 ntBASIC-2.66□□□□□ -2.84
HLA-DMBP28068 SNORD18C-201ENST00000362704 69 ntBASIC-2.67□□□□□ -2.84
HLA-DMBP28068 SNORA41B-201ENST00000384785 128 ntBASIC-2.67□□□□□ -2.84
HLA-DMBP28068 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-2.67□□□□□ -2.84
HLA-DMBP28068 RNU6-1045P-201ENST00000516321 107 ntBASIC-2.67□□□□□ -2.84
HLA-DMBP28068 RNU6-554P-201ENST00000410466 106 ntBASIC-2.68□□□□□ -2.84
HLA-DMBP28068 RNY3P8-201ENST00000411366 126 ntBASIC-2.68□□□□□ -2.84
HLA-DMBP28068 AL117351.2-201ENST00000513571 157 ntBASIC-2.68□□□□□ -2.84
HLA-DMBP28068 MIRLET7A1-201ENST00000362295 80 ntBASIC-2.69□□□□□ -2.84
HLA-DMBP28068 RNU6-668P-201ENST00000364180 107 ntBASIC-2.69□□□□□ -2.84
HLA-DMBP28068 RNU6-463P-201ENST00000384340 107 ntBASIC-2.69□□□□□ -2.84
HLA-DMBP28068 RNU6-106P-201ENST00000384405 107 ntBASIC-2.69□□□□□ -2.84
HLA-DMBP28068 Y_RNA.532-201ENST00000384590 113 ntBASIC-2.69□□□□□ -2.84
HLA-DMBP28068 Y_RNA.647-201ENST00000459194 112 ntBASIC-2.69□□□□□ -2.84
HLA-DMBP28068 Y_RNA.640-201ENST00000459296 112 ntBASIC-2.69□□□□□ -2.84
HLA-DMBP28068 SNORD63.2-201ENST00000516303 64 ntBASIC-2.69□□□□□ -2.84
HLA-DMBP28068 Y_RNA.803-201ENST00000614432 112 ntBASIC-2.69□□□□□ -2.84
HLA-DMBP28068 Y_RNA.815-201ENST00000616655 112 ntBASIC-2.69□□□□□ -2.84
HLA-DMBP28068 Y_RNA.795-201ENST00000619475 112 ntBASIC-2.69□□□□□ -2.84
HLA-DMBP28068 Y_RNA.827-201ENST00000638104 112 ntBASIC-2.69□□□□□ -2.84
HLA-DMBP28068 RNY4P9-201ENST00000363194 97 ntBASIC-2.7□□□□□ -2.84
HLA-DMBP28068 SNORA19-201ENST00000384737 128 ntBASIC-2.7□□□□□ -2.84
HLA-DMBP28068 MT-TG-201ENST00000387429 68 ntBASIC-2.7□□□□□ -2.84
HLA-DMBP28068 Y_RNA.620-201ENST00000411009 88 ntBASIC-2.7□□□□□ -2.84
HLA-DMBP28068 RNU7-151P-201ENST00000516930 53 ntBASIC-2.7□□□□□ -2.84
HLA-DMBP28068 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-2.7□□□□□ -2.84
HLA-DMBP28068 RNU6-497P-201ENST00000365316 104 ntBASIC-2.71□□□□□ -2.84
HLA-DMBP28068 RNU6-669P-201ENST00000365575 107 ntBASIC-2.71□□□□□ -2.84
HLA-DMBP28068 RNY1P5-201ENST00000383890 115 ntBASIC-2.71□□□□□ -2.84
HLA-DMBP28068 RNY4P18-201ENST00000391107 89 ntBASIC-2.71□□□□□ -2.84
HLA-DMBP28068 MIR8053-201ENST00000613344 75 ntBASIC-2.71□□□□□ -2.84
HLA-DMBP28068 RNU6-1325P-201ENST00000364905 105 ntBASIC-2.72□□□□□ -2.84
HLA-DMBP28068 SNORD116-14-201ENST00000383894 92 ntBASIC-2.72□□□□□ -2.84
HLA-DMBP28068 SNORD116-17-201ENST00000383929 92 ntBASIC-2.72□□□□□ -2.84
HLA-DMBP28068 SNORD116-15-201ENST00000384445 92 ntBASIC-2.72□□□□□ -2.84
HLA-DMBP28068 SNORD116-19-201ENST00000384729 92 ntBASIC-2.72□□□□□ -2.84
HLA-DMBP28068 AP001094.1-201ENST00000579805 193 ntBASIC-2.72□□□□□ -2.84
HLA-DMBP28068 MIR1297-201ENST00000637311 77 ntBASIC-2.72□□□□□ -2.84
HLA-DMBP28068 RNU6-129P-201ENST00000391022 107 ntBASIC-2.73□□□□□ -2.85
HLA-DMBP28068 RNU6-1212P-201ENST00000517023 104 ntBASIC-2.73□□□□□ -2.85
HLA-DMBP28068 SNORD113.1-201ENST00000363280 73 ntBASIC-2.74□□□□□ -2.85
HLA-DMBP28068 Y_RNA.349-201ENST00000365406 102 ntBASIC-2.74□□□□□ -2.85
HLA-DMBP28068 Y_RNA.506-201ENST00000384494 102 ntBASIC-2.74□□□□□ -2.85
HLA-DMBP28068 MIR125B1-201ENST00000385236 88 ntBASIC-2.74□□□□□ -2.85
HLA-DMBP28068 RNU6-402P-201ENST00000410678 103 ntBASIC-2.74□□□□□ -2.85
HLA-DMBP28068 MIR7978-201ENST00000636158 59 ntBASIC-2.74□□□□□ -2.85
HLA-DMBP28068 Y_RNA.464-201ENST00000384282 110 ntBASIC-2.75□□□□□ -2.85
HLA-DMBP28068 Y_RNA.544-201ENST00000384650 113 ntBASIC-2.75□□□□□ -2.85
HLA-DMBP28068 RNU6-346P-201ENST00000516288 111 ntBASIC-2.75□□□□□ -2.85
HLA-DMBP28068 RNU6-523P-201ENST00000516304 54 ntBASIC-2.75□□□□□ -2.85
HLA-DMBP28068 RNU6-230P-201ENST00000362457 104 ntBASIC-2.76□□□□□ -2.85
HLA-DMBP28068 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-2.76□□□□□ -2.85
HLA-DMBP28068 RNU6-1191P-201ENST00000516799 107 ntBASIC-2.76□□□□□ -2.85
HLA-DMBP28068 RNY1P1-201ENST00000364372 112 ntBASIC-2.77□□□□□ -2.85
HLA-DMBP28068 RNU6-219P-201ENST00000364728 107 ntBASIC-2.77□□□□□ -2.85
HLA-DMBP28068 Y_RNA.321-201ENST00000365149 102 ntBASIC-2.77□□□□□ -2.85
HLA-DMBP28068 SNORD116-22-201ENST00000384430 92 ntBASIC-2.77□□□□□ -2.85
HLA-DMBP28068 MIR581-201ENST00000384895 96 ntBASIC-2.77□□□□□ -2.85
HLA-DMBP28068 MIR2052-201ENST00000636055 55 ntBASIC-2.77□□□□□ -2.85
HLA-DMBP28068 RNU6-172P-201ENST00000411000 93 ntBASIC-2.78□□□□□ -2.85
HLA-DMBP28068 MIR548BB-201ENST00000626714 66 ntBASIC-2.78□□□□□ -2.85
HLA-DMBP28068 Y_RNA.186-201ENST00000363899 92 ntBASIC-2.79□□□□□ -2.86
HLA-DMBP28068 Y_RNA.219-201ENST00000364232 113 ntBASIC-2.79□□□□□ -2.86
HLA-DMBP28068 Y_RNA.291-201ENST00000364886 113 ntBASIC-2.79□□□□□ -2.86
HLA-DMBP28068 Y_RNA.313-201ENST00000365095 103 ntBASIC-2.79□□□□□ -2.86
HLA-DMBP28068 Y_RNA.513-201ENST00000384522 100 ntBASIC-2.79□□□□□ -2.86
HLA-DMBP28068 MIR579-201ENST00000385221 98 ntBASIC-2.79□□□□□ -2.86
HLA-DMBP28068 RNU6-141P-201ENST00000410499 105 ntBASIC-2.8□□□□□ -2.86
HLA-DMBP28068 MIR4484-201ENST00000582855 83 ntBASIC-2.8□□□□□ -2.86
HLA-DMBP28068 SNORA63.4-201ENST00000362763 126 ntBASIC-2.81□□□□□ -2.86
HLA-DMBP28068 RNU6-755P-201ENST00000364400 103 ntBASIC-2.81□□□□□ -2.86
HLA-DMBP28068 Y_RNA.443-201ENST00000384135 111 ntBASIC-2.81□□□□□ -2.86
HLA-DMBP28068 Y_RNA.519-201ENST00000384553 102 ntBASIC-2.82□□□□□ -2.86
HLA-DMBP28068 Y_RNA.629-201ENST00000411368 105 ntBASIC-2.82□□□□□ -2.86
HLA-DMBP28068 SNORD45A-201ENST00000384512 84 ntBASIC-2.83□□□□□ -2.86
Retrieved 100 of 98,524 protein–RNA pairs in 8.1 ms