Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 RNU6-907P-201ENST00000390924 102 ntBASIC-1.88□□□□□ -2.71
USF1P22415 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.88□□□□□ -2.71
USF1P22415 SNORD45.1-201ENST00000363181 77 ntBASIC-1.89□□□□□ -2.71
USF1P22415 RNU6-258P-201ENST00000390884 101 ntBASIC-1.89□□□□□ -2.71
USF1P22415 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.89□□□□□ -2.71
USF1P22415 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.9□□□□□ -2.71
USF1P22415 RNU6-766P-201ENST00000362478 107 ntBASIC-1.91□□□□□ -2.72
USF1P22415 RNU6-686P-201ENST00000364839 107 ntBASIC-1.91□□□□□ -2.72
USF1P22415 SNORD115-31-201ENST00000365318 82 ntBASIC-1.91□□□□□ -2.72
USF1P22415 SNORD116-16-201ENST00000384533 92 ntBASIC-1.91□□□□□ -2.72
USF1P22415 MT-TM-201ENST00000387377 68 ntBASIC-1.91□□□□□ -2.72
USF1P22415 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.91□□□□□ -2.72
USF1P22415 RNU6-219P-201ENST00000364728 107 ntBASIC-1.92□□□□□ -2.72
USF1P22415 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.92□□□□□ -2.72
USF1P22415 MIR548AA1-201ENST00000384971 97 ntBASIC-1.92□□□□□ -2.72
USF1P22415 SNORD113-2-201ENST00000391082 72 ntBASIC-1.92□□□□□ -2.72
USF1P22415 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.93□□□□□ -2.72
USF1P22415 MIR630-201ENST00000384957 97 ntBASIC-1.93□□□□□ -2.72
USF1P22415 MIR548W-201ENST00000581970 74 ntBASIC-1.94□□□□□ -2.72
USF1P22415 MIR4719-201ENST00000585233 84 ntBASIC-1.94□□□□□ -2.72
USF1P22415 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.94□□□□□ -2.72
USF1P22415 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.94□□□□□ -2.72
USF1P22415 RNA5SP215-201ENST00000363440 122 ntBASIC-1.95□□□□□ -2.72
USF1P22415 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.95□□□□□ -2.72
USF1P22415 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.95□□□□□ -2.72
USF1P22415 MIR548BB-201ENST00000626714 66 ntBASIC-1.95□□□□□ -2.72
USF1P22415 SNORD1B-201ENST00000363091 84 ntBASIC-1.96□□□□□ -2.72
USF1P22415 Y_RNA.261-201ENST00000364631 102 ntBASIC-1.96□□□□□ -2.72
USF1P22415 SNORA41B-201ENST00000384785 128 ntBASIC-1.96□□□□□ -2.72
USF1P22415 MTND4LP1-201ENST00000446263 157 ntBASIC-1.96□□□□□ -2.72
USF1P22415 snoU13.10-201ENST00000459301 103 ntBASIC-1.96□□□□□ -2.72
USF1P22415 RNU6-267P-201ENST00000516714 103 ntBASIC-1.96□□□□□ -2.72
USF1P22415 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.96□□□□□ -2.72
USF1P22415 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.97□□□□□ -2.72
USF1P22415 RNY4P7-201ENST00000364600 96 ntBASIC-1.97□□□□□ -2.72
USF1P22415 SNORD116-22-201ENST00000384430 92 ntBASIC-1.97□□□□□ -2.72
USF1P22415 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.97□□□□□ -2.72
USF1P22415 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.97□□□□□ -2.72
USF1P22415 RNU6-402P-201ENST00000410678 103 ntBASIC-1.98□□□□□ -2.73
USF1P22415 RNU6-589P-201ENST00000516485 107 ntBASIC-1.98□□□□□ -2.73
USF1P22415 MIR2052-201ENST00000636055 55 ntBASIC-1.98□□□□□ -2.73
USF1P22415 RNU6-247P-201ENST00000362636 107 ntBASIC-1.99□□□□□ -2.73
USF1P22415 SNORD113.1-201ENST00000363280 73 ntBASIC-1.99□□□□□ -2.73
USF1P22415 RNU6-129P-201ENST00000391022 107 ntBASIC-1.99□□□□□ -2.73
USF1P22415 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.99□□□□□ -2.73
USF1P22415 MIR4484-201ENST00000582855 83 ntBASIC-1.99□□□□□ -2.73
USF1P22415 AC013734.1-201ENST00000619329 111 ntBASIC-1.99□□□□□ -2.73
USF1P22415 RNU6-668P-201ENST00000364180 107 ntBASIC-2□□□□□ -2.73
USF1P22415 RNU6-1306P-201ENST00000365219 99 ntBASIC-2□□□□□ -2.73
USF1P22415 RNU6-1081P-201ENST00000384537 107 ntBASIC-2□□□□□ -2.73
USF1P22415 MIR4748-201ENST00000578076 82 ntBASIC-2□□□□□ -2.73
USF1P22415 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2□□□□□ -2.73
USF1P22415 MIR1297-201ENST00000637311 77 ntBASIC-2□□□□□ -2.73
USF1P22415 AC099654.10-201ENST00000640395 161 ntBASIC-2□□□□□ -2.73
USF1P22415 RNU6-1325P-201ENST00000364905 105 ntBASIC-2.01□□□□□ -2.73
USF1P22415 MIR466-201ENST00000580653 84 ntBASIC-2.01□□□□□ -2.73
USF1P22415 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.01□□□□□ -2.73
USF1P22415 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-2.01□□□□□ -2.73
USF1P22415 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-2.02□□□□□ -2.73
USF1P22415 AC005520.4-201ENST00000604337 90 ntBASIC-2.02□□□□□ -2.73
USF1P22415 MIR8053-201ENST00000613344 75 ntBASIC-2.02□□□□□ -2.73
USF1P22415 MALAT1.1-201ENST00000618249 95 ntBASIC-2.02□□□□□ -2.73
USF1P22415 RNA5SP173-201ENST00000364857 136 ntBASIC-2.03□□□□□ -2.73
USF1P22415 SNORD54-201ENST00000459159 67 ntBASIC-2.03□□□□□ -2.73
USF1P22415 RNU7-151P-201ENST00000516930 53 ntBASIC-2.03□□□□□ -2.73
USF1P22415 SNORA27.2-201ENST00000363365 126 ntBASIC-2.04□□□□□ -2.74
USF1P22415 Y_RNA.204-201ENST00000364112 102 ntBASIC-2.04□□□□□ -2.74
USF1P22415 RNU6-959P-201ENST00000384671 107 ntBASIC-2.04□□□□□ -2.74
USF1P22415 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-2.04□□□□□ -2.74
USF1P22415 AC008267.6-201ENST00000441664 139 ntBASIC-2.04□□□□□ -2.74
USF1P22415 RNA5SP93-201ENST00000362525 114 ntBASIC-2.05□□□□□ -2.74
USF1P22415 RNU6-669P-201ENST00000365575 107 ntBASIC-2.05□□□□□ -2.74
USF1P22415 SNORD45A-201ENST00000384512 84 ntBASIC-2.05□□□□□ -2.74
USF1P22415 RNY4P18-201ENST00000391107 89 ntBASIC-2.05□□□□□ -2.74
USF1P22415 Y_RNA.611-201ENST00000410682 108 ntBASIC-2.05□□□□□ -2.74
USF1P22415 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-2.05□□□□□ -2.74
USF1P22415 MIR7978-201ENST00000636158 59 ntBASIC-2.05□□□□□ -2.74
USF1P22415 U6.97-201ENST00000636904 101 ntBASIC-2.05□□□□□ -2.74
USF1P22415 RNU6-995P-201ENST00000391244 107 ntBASIC-2.06□□□□□ -2.74
USF1P22415 RNU6-675P-201ENST00000384236 104 ntBASIC-2.07□□□□□ -2.74
USF1P22415 MIR125B1-201ENST00000385236 88 ntBASIC-2.07□□□□□ -2.74
USF1P22415 SNORD63.2-201ENST00000516303 64 ntBASIC-2.07□□□□□ -2.74
USF1P22415 AL365222.1-201ENST00000614661 98 ntBASIC-2.07□□□□□ -2.74
USF1P22415 AP001318.4-201ENST00000616637 121 ntBASIC-2.07□□□□□ -2.74
USF1P22415 MIR664A-201ENST00000626086 82 ntBASIC-2.07□□□□□ -2.74
USF1P22415 MIR450A1-201ENST00000362262 91 ntBASIC-2.08□□□□□ -2.74
USF1P22415 SNORA63.4-201ENST00000362763 126 ntBASIC-2.08□□□□□ -2.74
USF1P22415 Y_RNA.703-201ENST00000516846 111 ntBASIC-2.08□□□□□ -2.74
USF1P22415 RNU6-834P-201ENST00000362367 110 ntBASIC-2.09□□□□□ -2.74
USF1P22415 MIR579-201ENST00000385221 98 ntBASIC-2.09□□□□□ -2.74
USF1P22415 RNU6-172P-201ENST00000411000 93 ntBASIC-2.09□□□□□ -2.74
USF1P22415 AL031737.1-201ENST00000450125 223 ntBASIC-2.09□□□□□ -2.74
USF1P22415 Y_RNA.709-201ENST00000516952 92 ntBASIC-2.09□□□□□ -2.74
USF1P22415 MIR3133-201ENST00000583157 78 ntBASIC-2.09□□□□□ -2.74
USF1P22415 FTX_4.1-201ENST00000616291 147 ntBASIC-2.09□□□□□ -2.74
USF1P22415 AC006160.2-201ENST00000637708 154 ntBASIC-2.09□□□□□ -2.74
USF1P22415 RNU6-755P-201ENST00000364400 103 ntBASIC-2.1□□□□□ -2.75
USF1P22415 RNU6-1056P-201ENST00000383996 107 ntBASIC-2.1□□□□□ -2.75
USF1P22415 Y_RNA.421-201ENST00000384052 101 ntBASIC-2.1□□□□□ -2.75
USF1P22415 RNU6-523P-201ENST00000516304 54 ntBASIC-2.1□□□□□ -2.75
Retrieved 100 of 98,524 protein–RNA pairs in 169 ms