Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 RNU6-940P-201ENST00000363433 104 ntBASIC-0.29□□□□□ -2.46
COL5A1P20908 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.29□□□□□ -2.46
COL5A1P20908 RNU6-668P-201ENST00000364180 107 ntBASIC-0.29□□□□□ -2.46
COL5A1P20908 SNORA3B-201ENST00000391305 131 ntBASIC-0.29□□□□□ -2.46
COL5A1P20908 RNU6-721P-201ENST00000410155 105 ntBASIC-0.29□□□□□ -2.46
COL5A1P20908 RNU6-284P-201ENST00000411105 106 ntBASIC-0.29□□□□□ -2.46
COL5A1P20908 RNU7-88P-201ENST00000458752 63 ntBASIC-0.29□□□□□ -2.46
COL5A1P20908 RNU6-1296P-201ENST00000383879 107 ntBASIC-0.29□□□□□ -2.46
COL5A1P20908 SNORA26.4-201ENST00000391188 123 ntBASIC-0.29□□□□□ -2.46
COL5A1P20908 SNORD63.1-201ENST00000516178 80 ntBASIC-0.29□□□□□ -2.46
COL5A1P20908 RNU6-687P-201ENST00000516443 89 ntBASIC-0.29□□□□□ -2.46
COL5A1P20908 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.3□□□□□ -2.46
COL5A1P20908 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.3□□□□□ -2.46
COL5A1P20908 MIR3681-201ENST00000580089 72 ntBASIC-0.3□□□□□ -2.46
COL5A1P20908 RNU6-776P-201ENST00000364403 104 ntBASIC-0.31□□□□□ -2.46
COL5A1P20908 RNU6-1022P-201ENST00000365049 104 ntBASIC-0.31□□□□□ -2.46
COL5A1P20908 RNU6-24P-201ENST00000384440 107 ntBASIC-0.31□□□□□ -2.46
COL5A1P20908 Y_RNA.545-201ENST00000384652 105 ntBASIC-0.31□□□□□ -2.46
COL5A1P20908 RNU6-246P-201ENST00000384702 107 ntBASIC-0.31□□□□□ -2.46
COL5A1P20908 RNU6-523P-201ENST00000516304 54 ntBASIC-0.31□□□□□ -2.46
COL5A1P20908 MIR4490-201ENST00000582647 84 ntBASIC-0.31□□□□□ -2.46
COL5A1P20908 MIR429-201ENST00000362106 83 ntBASIC-0.31□□□□□ -2.46
COL5A1P20908 SNORD116-24-201ENST00000384549 92 ntBASIC-0.31□□□□□ -2.46
COL5A1P20908 MIR527-201ENST00000385244 85 ntBASIC-0.31□□□□□ -2.46
COL5A1P20908 RNU6-518P-201ENST00000516056 96 ntBASIC-0.31□□□□□ -2.46
COL5A1P20908 RNU6-696P-201ENST00000390834 107 ntBASIC-0.32□□□□□ -2.46
COL5A1P20908 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.32□□□□□ -2.46
COL5A1P20908 RNA5SP192-201ENST00000364404 120 ntBASIC-0.33□□□□□ -2.46
COL5A1P20908 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.33□□□□□ -2.46
COL5A1P20908 RNU6-458P-201ENST00000384179 107 ntBASIC-0.33□□□□□ -2.46
COL5A1P20908 SNORD116-16-201ENST00000384533 92 ntBASIC-0.33□□□□□ -2.46
COL5A1P20908 RNU6-871P-201ENST00000516122 100 ntBASIC-0.33□□□□□ -2.46
COL5A1P20908 U6.58-201ENST00000613107 107 ntBASIC-0.33□□□□□ -2.46
COL5A1P20908 SNORA25.4-201ENST00000363666 124 ntBASIC-0.34□□□□□ -2.46
COL5A1P20908 MIR517B-201ENST00000385102 67 ntBASIC-0.34□□□□□ -2.46
COL5A1P20908 MIR196A1-201ENST00000388006 70 ntBASIC-0.34□□□□□ -2.46
COL5A1P20908 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.34□□□□□ -2.46
COL5A1P20908 RNA5SP169-201ENST00000517268 117 ntBASIC-0.34□□□□□ -2.46
COL5A1P20908 RNU6-471P-201ENST00000383944 106 ntBASIC-0.34□□□□□ -2.46
COL5A1P20908 RNU6-895P-201ENST00000384125 103 ntBASIC-0.34□□□□□ -2.46
COL5A1P20908 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.34□□□□□ -2.46
COL5A1P20908 RNU6-630P-201ENST00000391258 106 ntBASIC-0.34□□□□□ -2.46
COL5A1P20908 SNORD114-17-201ENST00000364699 75 ntBASIC-0.35□□□□□ -2.47
COL5A1P20908 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.35□□□□□ -2.47
COL5A1P20908 MIR889-201ENST00000401280 79 ntBASIC-0.35□□□□□ -2.47
COL5A1P20908 RNU6-539P-201ENST00000516665 103 ntBASIC-0.35□□□□□ -2.47
COL5A1P20908 MIR548AG1-201ENST00000579932 66 ntBASIC-0.35□□□□□ -2.47
COL5A1P20908 AC005520.4-201ENST00000604337 90 ntBASIC-0.35□□□□□ -2.47
COL5A1P20908 SNORD60.1-201ENST00000362451 73 ntBASIC-0.36□□□□□ -2.47
COL5A1P20908 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.36□□□□□ -2.47
COL5A1P20908 RNU7-151P-201ENST00000516930 53 ntBASIC-0.36□□□□□ -2.47
COL5A1P20908 MIR4511-201ENST00000582784 87 ntBASIC-0.36□□□□□ -2.47
COL5A1P20908 RNU6-540P-201ENST00000384622 101 ntBASIC-0.36□□□□□ -2.47
COL5A1P20908 MIR548C-201ENST00000384815 97 ntBASIC-0.36□□□□□ -2.47
COL5A1P20908 MIR548AA1-201ENST00000384971 97 ntBASIC-0.36□□□□□ -2.47
COL5A1P20908 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.36□□□□□ -2.47
COL5A1P20908 RNU6-92P-201ENST00000605893 104 ntBASIC-0.36□□□□□ -2.47
COL5A1P20908 SNORA41B-201ENST00000384785 128 ntBASIC-0.37□□□□□ -2.47
COL5A1P20908 SNORD30.1-201ENST00000391309 70 ntBASIC-0.37□□□□□ -2.47
COL5A1P20908 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.37□□□□□ -2.47
COL5A1P20908 AL353691.2-201ENST00000443795 59 ntBASIC-0.37□□□□□ -2.47
COL5A1P20908 AP002795.1-201ENST00000534879 84 ntBASIC-0.37□□□□□ -2.47
COL5A1P20908 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-0.38□□□□□ -2.47
COL5A1P20908 MIR1207-201ENST00000408249 87 ntBASIC-0.38□□□□□ -2.47
COL5A1P20908 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.38□□□□□ -2.47
COL5A1P20908 SNORD1B-201ENST00000363091 84 ntBASIC-0.38□□□□□ -2.47
COL5A1P20908 SNORD115-33-201ENST00000363723 82 ntBASIC-0.38□□□□□ -2.47
COL5A1P20908 RNU6-590P-201ENST00000365039 107 ntBASIC-0.38□□□□□ -2.47
COL5A1P20908 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.38□□□□□ -2.47
COL5A1P20908 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.38□□□□□ -2.47
COL5A1P20908 RNA5SP461-201ENST00000516451 104 ntBASIC-0.38□□□□□ -2.47
COL5A1P20908 MIR3165-201ENST00000579874 75 ntBASIC-0.38□□□□□ -2.47
COL5A1P20908 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.38□□□□□ -2.47
COL5A1P20908 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.38□□□□□ -2.47
COL5A1P20908 RNU6-10P-201ENST00000384036 107 ntBASIC-0.39□□□□□ -2.47
COL5A1P20908 Y_RNA.443-201ENST00000384135 111 ntBASIC-0.39□□□□□ -2.47
COL5A1P20908 SNORD64-201ENST00000386683 67 ntBASIC-0.39□□□□□ -2.47
COL5A1P20908 SNORD114-25-201ENST00000363742 72 ntBASIC-0.4□□□□□ -2.47
COL5A1P20908 SNORD114-3-201ENST00000364969 75 ntBASIC-0.4□□□□□ -2.47
COL5A1P20908 RNU6-649P-201ENST00000384463 107 ntBASIC-0.4□□□□□ -2.47
COL5A1P20908 Y_RNA.565-201ENST00000384719 101 ntBASIC-0.4□□□□□ -2.47
COL5A1P20908 SNORD19-201ENST00000391191 68 ntBASIC-0.4□□□□□ -2.47
COL5A1P20908 AC110620.1-201ENST00000416042 228 ntBASIC-0.4□□□□□ -2.47
COL5A1P20908 RNU6-431P-201ENST00000383874 107 ntBASIC-0.41□□□□□ -2.47
COL5A1P20908 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.41□□□□□ -2.47
COL5A1P20908 MIR3938-201ENST00000582157 103 ntBASIC-0.41□□□□□ -2.47
COL5A1P20908 U4.2-201ENST00000618561 85 ntBASIC-0.41□□□□□ -2.47
COL5A1P20908 U2.18-201ENST00000622185 84 ntBASIC-0.41□□□□□ -2.47
COL5A1P20908 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.41□□□□□ -2.48
COL5A1P20908 MIR548Q-201ENST00000408404 100 ntBASIC-0.41□□□□□ -2.48
COL5A1P20908 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.41□□□□□ -2.48
COL5A1P20908 SCARNA17-201ENST00000516183 144 ntBASIC-0.41□□□□□ -2.48
COL5A1P20908 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.42□□□□□ -2.48
COL5A1P20908 AC103706.3-201ENST00000636297 85 ntBASIC-0.42□□□□□ -2.48
COL5A1P20908 MIR365A-201ENST00000362260 87 ntBASIC-0.43□□□□□ -2.48
COL5A1P20908 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.43□□□□□ -2.48
COL5A1P20908 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.43□□□□□ -2.48
COL5A1P20908 MIR382-201ENST00000637119 76 ntBASIC-0.43□□□□□ -2.48
COL5A1P20908 SNORD83B-201ENST00000386745 93 ntBASIC-0.43□□□□□ -2.48
COL5A1P20908 MIR4320-201ENST00000636981 65 ntBASIC-0.43□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 238.9 ms