Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 Y_RNA.604-201ENST00000410574 102 ntBASIC-4.12□□□□□ -3.07
TPM1P09493 RNU6-668P-201ENST00000364180 107 ntBASIC-4.13□□□□□ -3.07
TPM1P09493 Y_RNA.290-201ENST00000364879 114 ntBASIC-4.13□□□□□ -3.07
TPM1P09493 Y_RNA.501-201ENST00000384467 103 ntBASIC-4.13□□□□□ -3.07
TPM1P09493 RNY3P8-201ENST00000411366 126 ntBASIC-4.13□□□□□ -3.07
TPM1P09493 RNU6-388P-201ENST00000517012 105 ntBASIC-4.13□□□□□ -3.07
TPM1P09493 RNU6-389P-201ENST00000517048 105 ntBASIC-4.13□□□□□ -3.07
TPM1P09493 RNU6-669P-201ENST00000365575 107 ntBASIC-4.14□□□□□ -3.07
TPM1P09493 MT-TM-201ENST00000387377 68 ntBASIC-4.14□□□□□ -3.07
TPM1P09493 FTX_4.1-201ENST00000616291 147 ntBASIC-4.14□□□□□ -3.07
TPM1P09493 Y_RNA.218-201ENST00000364218 104 ntBASIC-4.15□□□□□ -3.07
TPM1P09493 RNU6-886P-201ENST00000384319 105 ntBASIC-4.15□□□□□ -3.07
TPM1P09493 SNORA41B-201ENST00000384785 128 ntBASIC-4.16□□□□□ -3.08
TPM1P09493 RNY4P18-201ENST00000391107 89 ntBASIC-4.16□□□□□ -3.08
TPM1P09493 RNU7-151P-201ENST00000516930 53 ntBASIC-4.16□□□□□ -3.08
TPM1P09493 TARS-215ENST00000626210 201 ntTSL 5 BASIC-4.16□□□□□ -3.08
TPM1P09493 Y_RNA.71-201ENST00000362892 104 ntBASIC-4.18□□□□□ -3.08
TPM1P09493 RNU6-1325P-201ENST00000364905 105 ntBASIC-4.18□□□□□ -3.08
TPM1P09493 SNORD18C-201ENST00000362704 69 ntBASIC-4.19□□□□□ -3.08
TPM1P09493 RNU6-554P-201ENST00000410466 106 ntBASIC-4.19□□□□□ -3.08
TPM1P09493 MIR8053-201ENST00000613344 75 ntBASIC-4.19□□□□□ -3.08
TPM1P09493 SNORA19-201ENST00000384737 128 ntBASIC-4.2□□□□□ -3.08
TPM1P09493 RNU6-129P-201ENST00000391022 107 ntBASIC-4.2□□□□□ -3.08
TPM1P09493 AC097484.2-201ENST00000509147 251 ntBASIC-4.2□□□□□ -3.08
TPM1P09493 MIRLET7A1-201ENST00000362295 80 ntBASIC-4.21□□□□□ -3.08
TPM1P09493 MIR1207-201ENST00000408249 87 ntBASIC-4.21□□□□□ -3.08
TPM1P09493 Y_RNA.620-201ENST00000411009 88 ntBASIC-4.21□□□□□ -3.08
TPM1P09493 RNU6-1045P-201ENST00000516321 107 ntBASIC-4.21□□□□□ -3.08
TPM1P09493 RNU6-1094P-201ENST00000362416 104 ntBASIC-4.22□□□□□ -3.08
TPM1P09493 Y_RNA.257-201ENST00000364596 102 ntBASIC-4.22□□□□□ -3.08
TPM1P09493 RNU6-106P-201ENST00000384405 107 ntBASIC-4.22□□□□□ -3.08
TPM1P09493 MIR579-201ENST00000385221 98 ntBASIC-4.22□□□□□ -3.08
TPM1P09493 RNU6-523P-201ENST00000516304 54 ntBASIC-4.22□□□□□ -3.08
TPM1P09493 MIR1297-201ENST00000637311 77 ntBASIC-4.22□□□□□ -3.08
TPM1P09493 Y_RNA.532-201ENST00000384590 113 ntBASIC-4.23□□□□□ -3.09
TPM1P09493 MIR4723-201ENST00000585070 81 ntBASIC-4.24□□□□□ -3.09
TPM1P09493 MIR7978-201ENST00000636158 59 ntBASIC-4.24□□□□□ -3.09
TPM1P09493 SNORD113.1-201ENST00000363280 73 ntBASIC-4.25□□□□□ -3.09
TPM1P09493 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-4.25□□□□□ -3.09
TPM1P09493 Y_RNA.321-201ENST00000365149 102 ntBASIC-4.26□□□□□ -3.09
TPM1P09493 RNU6-1306P-201ENST00000365219 99 ntBASIC-4.27□□□□□ -3.09
TPM1P09493 SNORD116-14-201ENST00000383894 92 ntBASIC-4.27□□□□□ -3.09
TPM1P09493 SNORD116-17-201ENST00000383929 92 ntBASIC-4.27□□□□□ -3.09
TPM1P09493 RNU6-463P-201ENST00000384340 107 ntBASIC-4.27□□□□□ -3.09
TPM1P09493 SNORD116-15-201ENST00000384445 92 ntBASIC-4.27□□□□□ -3.09
TPM1P09493 Y_RNA.544-201ENST00000384650 113 ntBASIC-4.27□□□□□ -3.09
TPM1P09493 SNORD116-19-201ENST00000384729 92 ntBASIC-4.27□□□□□ -3.09
TPM1P09493 AL117351.2-201ENST00000513571 157 ntBASIC-4.27□□□□□ -3.09
TPM1P09493 MIR125B1-201ENST00000385236 88 ntBASIC-4.28□□□□□ -3.09
TPM1P09493 Y_RNA.647-201ENST00000459194 112 ntBASIC-4.28□□□□□ -3.09
TPM1P09493 Y_RNA.640-201ENST00000459296 112 ntBASIC-4.28□□□□□ -3.09
TPM1P09493 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-4.28□□□□□ -3.09
TPM1P09493 Y_RNA.803-201ENST00000614432 112 ntBASIC-4.28□□□□□ -3.09
TPM1P09493 Y_RNA.815-201ENST00000616655 112 ntBASIC-4.28□□□□□ -3.09
TPM1P09493 Y_RNA.795-201ENST00000619475 112 ntBASIC-4.28□□□□□ -3.09
TPM1P09493 Y_RNA.827-201ENST00000638104 112 ntBASIC-4.28□□□□□ -3.09
TPM1P09493 SNORD116-22-201ENST00000384430 92 ntBASIC-4.29□□□□□ -3.1
TPM1P09493 RNU6-172P-201ENST00000411000 93 ntBASIC-4.29□□□□□ -3.1
TPM1P09493 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-4.3□□□□□ -3.1
TPM1P09493 RNU6-402P-201ENST00000410678 103 ntBASIC-4.3□□□□□ -3.1
TPM1P09493 RNU6-346P-201ENST00000516288 111 ntBASIC-4.3□□□□□ -3.1
TPM1P09493 Y_RNA.684-201ENST00000516510 99 ntBASIC-4.3□□□□□ -3.1
TPM1P09493 MIR4484-201ENST00000582855 83 ntBASIC-4.3□□□□□ -3.1
TPM1P09493 MIR2052-201ENST00000636055 55 ntBASIC-4.3□□□□□ -3.1
TPM1P09493 RNY1P5-201ENST00000383890 115 ntBASIC-4.31□□□□□ -3.1
TPM1P09493 MIR581-201ENST00000384895 96 ntBASIC-4.31□□□□□ -3.1
TPM1P09493 MT-TG-201ENST00000387429 68 ntBASIC-4.32□□□□□ -3.1
TPM1P09493 RNY1P1-201ENST00000364372 112 ntBASIC-4.33□□□□□ -3.1
TPM1P09493 RNU6-755P-201ENST00000364400 103 ntBASIC-4.33□□□□□ -3.1
TPM1P09493 RNU6-497P-201ENST00000365316 104 ntBASIC-4.33□□□□□ -3.1
TPM1P09493 RNU6-974P-201ENST00000384099 108 ntBASIC-4.33□□□□□ -3.1
TPM1P09493 MIR548BB-201ENST00000626714 66 ntBASIC-4.33□□□□□ -3.1
TPM1P09493 RNY4P9-201ENST00000363194 97 ntBASIC-4.34□□□□□ -3.1
TPM1P09493 Y_RNA.219-201ENST00000364232 113 ntBASIC-4.34□□□□□ -3.1
TPM1P09493 RNU6-219P-201ENST00000364728 107 ntBASIC-4.34□□□□□ -3.1
TPM1P09493 Y_RNA.349-201ENST00000365406 102 ntBASIC-4.34□□□□□ -3.1
TPM1P09493 RNU6-380P-201ENST00000410207 107 ntBASIC-4.34□□□□□ -3.1
TPM1P09493 AP001094.1-201ENST00000579805 193 ntBASIC-4.34□□□□□ -3.1
TPM1P09493 SNORA63.4-201ENST00000362763 126 ntBASIC-4.35□□□□□ -3.11
TPM1P09493 Y_RNA.506-201ENST00000384494 102 ntBASIC-4.35□□□□□ -3.11
TPM1P09493 Y_RNA.464-201ENST00000384282 110 ntBASIC-4.36□□□□□ -3.11
TPM1P09493 SNORD54-201ENST00000459159 67 ntBASIC-4.36□□□□□ -3.11
TPM1P09493 RNU6-1212P-201ENST00000517023 104 ntBASIC-4.36□□□□□ -3.11
TPM1P09493 Y_RNA.139-201ENST00000363464 102 ntBASIC-4.38□□□□□ -3.11
TPM1P09493 SNORD45A-201ENST00000384512 84 ntBASIC-4.38□□□□□ -3.11
TPM1P09493 SNORD60-201ENST00000383903 83 ntBASIC-4.4□□□□□ -3.11
TPM1P09493 RNU6-520P-201ENST00000384717 104 ntBASIC-4.42□□□□□ -3.12
TPM1P09493 RNU6-267P-201ENST00000516714 103 ntBASIC-4.42□□□□□ -3.12
TPM1P09493 MIR202-201ENST00000362219 110 ntBASIC-4.43□□□□□ -3.12
TPM1P09493 MIR548N-201ENST00000408742 75 ntBASIC-4.43□□□□□ -3.12
TPM1P09493 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-4.43□□□□□ -3.12
TPM1P09493 RNU6-907P-201ENST00000390924 102 ntBASIC-4.44□□□□□ -3.12
TPM1P09493 Y_RNA.291-201ENST00000364886 113 ntBASIC-4.45□□□□□ -3.12
TPM1P09493 RNU6-649P-201ENST00000384463 107 ntBASIC-4.45□□□□□ -3.12
TPM1P09493 Y_RNA.611-201ENST00000410682 108 ntBASIC-4.45□□□□□ -3.12
TPM1P09493 Y_RNA.629-201ENST00000411368 105 ntBASIC-4.46□□□□□ -3.12
TPM1P09493 RNU7-160P-201ENST00000516660 62 ntBASIC-4.46□□□□□ -3.12
TPM1P09493 RNU6-1011P-201ENST00000384668 107 ntBASIC-4.47□□□□□ -3.13
TPM1P09493 RNU6-141P-201ENST00000410499 105 ntBASIC-4.48□□□□□ -3.13
TPM1P09493 SNORD113-3-201ENST00000364830 72 ntBASIC-4.49□□□□□ -3.13
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms