Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 U6.58-201ENST00000613107 107 ntBASIC-0.36□□□□□ -2.47
HOXC4P09017 RNU6-924P-201ENST00000362926 108 ntBASIC-0.37□□□□□ -2.47
HOXC4P09017 SNORA32.3-201ENST00000384772 121 ntBASIC-0.37□□□□□ -2.47
HOXC4P09017 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-0.37□□□□□ -2.47
HOXC4P09017 RNU6-871P-201ENST00000516122 100 ntBASIC-0.37□□□□□ -2.47
HOXC4P09017 AC005520.4-201ENST00000604337 90 ntBASIC-0.37□□□□□ -2.47
HOXC4P09017 SNORD114-17-201ENST00000364699 75 ntBASIC-0.38□□□□□ -2.47
HOXC4P09017 RNU6-649P-201ENST00000384463 107 ntBASIC-0.38□□□□□ -2.47
HOXC4P09017 RNU6-542P-201ENST00000516405 103 ntBASIC-0.38□□□□□ -2.47
HOXC4P09017 RNA5SP476-201ENST00000516613 103 ntBASIC-0.38□□□□□ -2.47
HOXC4P09017 U6.111-201ENST00000636093 83 ntBASIC-0.38□□□□□ -2.47
HOXC4P09017 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.39□□□□□ -2.47
HOXC4P09017 SNORA13-201ENST00000458790 133 ntBASIC-0.39□□□□□ -2.47
HOXC4P09017 SNORD114-14-201ENST00000362723 75 ntBASIC-0.4□□□□□ -2.47
HOXC4P09017 RNU6-598P-201ENST00000364017 105 ntBASIC-0.4□□□□□ -2.47
HOXC4P09017 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.4□□□□□ -2.47
HOXC4P09017 RNA5SP25-201ENST00000410815 110 ntBASIC-0.4□□□□□ -2.47
HOXC4P09017 AC021146.6-201ENST00000514659 117 ntBASIC-0.4□□□□□ -2.47
HOXC4P09017 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.4□□□□□ -2.47
HOXC4P09017 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.4□□□□□ -2.47
HOXC4P09017 SNORA25.4-201ENST00000363666 124 ntBASIC-0.41□□□□□ -2.48
HOXC4P09017 SNORD95.1-201ENST00000364099 68 ntBASIC-0.41□□□□□ -2.48
HOXC4P09017 SNORD116-16-201ENST00000384533 92 ntBASIC-0.41□□□□□ -2.48
HOXC4P09017 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.41□□□□□ -2.48
HOXC4P09017 MIR548AZ-201ENST00000616567 95 ntBASIC-0.41□□□□□ -2.48
HOXC4P09017 RNU6-1296P-201ENST00000383879 107 ntBASIC-0.42□□□□□ -2.48
HOXC4P09017 MIR224-201ENST00000384889 81 ntBASIC-0.42□□□□□ -2.48
HOXC4P09017 SNORD19-201ENST00000391191 68 ntBASIC-0.42□□□□□ -2.48
HOXC4P09017 RPS29P8-201ENST00000445109 171 ntBASIC-0.42□□□□□ -2.48
HOXC4P09017 RNU6-732P-201ENST00000516033 103 ntBASIC-0.42□□□□□ -2.48
HOXC4P09017 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.42□□□□□ -2.48
HOXC4P09017 RNU6-539P-201ENST00000516665 103 ntBASIC-0.42□□□□□ -2.48
HOXC4P09017 U2.18-201ENST00000622185 84 ntBASIC-0.42□□□□□ -2.48
HOXC4P09017 Y_RNA.386-201ENST00000383913 105 ntBASIC-0.43□□□□□ -2.48
HOXC4P09017 RNU6-800P-201ENST00000384473 103 ntBASIC-0.43□□□□□ -2.48
HOXC4P09017 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.43□□□□□ -2.48
HOXC4P09017 HAR1A.1-201ENST00000459583 118 ntBASIC-0.43□□□□□ -2.48
HOXC4P09017 SNORD63.1-201ENST00000516178 80 ntBASIC-0.43□□□□□ -2.48
HOXC4P09017 AP002795.1-201ENST00000534879 84 ntBASIC-0.43□□□□□ -2.48
HOXC4P09017 RNU6-92P-201ENST00000605893 104 ntBASIC-0.43□□□□□ -2.48
HOXC4P09017 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.44□□□□□ -2.48
HOXC4P09017 SNORA26.4-201ENST00000391188 123 ntBASIC-0.44□□□□□ -2.48
HOXC4P09017 SNORD60.1-201ENST00000362451 73 ntBASIC-0.45□□□□□ -2.48
HOXC4P09017 SNORD1B-201ENST00000363091 84 ntBASIC-0.45□□□□□ -2.48
HOXC4P09017 RNA5SP192-201ENST00000364404 120 ntBASIC-0.45□□□□□ -2.48
HOXC4P09017 RNU6-696P-201ENST00000390834 107 ntBASIC-0.45□□□□□ -2.48
HOXC4P09017 AC114801.3-201ENST00000510231 177 ntBASIC-0.45□□□□□ -2.48
HOXC4P09017 MIR4511-201ENST00000582784 87 ntBASIC-0.45□□□□□ -2.48
HOXC4P09017 SNORD114-25-201ENST00000363742 72 ntBASIC-0.46□□□□□ -2.48
HOXC4P09017 SNORA25.5-201ENST00000363782 126 ntBASIC-0.46□□□□□ -2.48
HOXC4P09017 RNU6-431P-201ENST00000383874 107 ntBASIC-0.46□□□□□ -2.48
HOXC4P09017 MIR429-201ENST00000362106 83 ntBASIC-0.47□□□□□ -2.48
HOXC4P09017 SNORD115-33-201ENST00000363723 82 ntBASIC-0.47□□□□□ -2.48
HOXC4P09017 SNORD114-15-201ENST00000364687 72 ntBASIC-0.47□□□□□ -2.48
HOXC4P09017 RNU6-30P-201ENST00000384561 107 ntBASIC-0.47□□□□□ -2.48
HOXC4P09017 SNORD64-201ENST00000386683 67 ntBASIC-0.47□□□□□ -2.48
HOXC4P09017 SNORD57-201ENST00000448188 72 ntBASIC-0.47□□□□□ -2.48
HOXC4P09017 snoU13.19-201ENST00000459148 104 ntBASIC-0.47□□□□□ -2.48
HOXC4P09017 MIR147A-201ENST00000385079 72 ntBASIC-0.48□□□□□ -2.49
HOXC4P09017 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.48□□□□□ -2.49
HOXC4P09017 RNU4-63P-201ENST00000411313 118 ntBASIC-0.49□□□□□ -2.49
HOXC4P09017 AC103706.3-201ENST00000636297 85 ntBASIC-0.49□□□□□ -2.49
HOXC4P09017 MT-TQ-201ENST00000387372 72 ntBASIC-0.5□□□□□ -2.49
HOXC4P09017 MIR548Q-201ENST00000408404 100 ntBASIC-0.5□□□□□ -2.49
HOXC4P09017 RNU6-1267P-201ENST00000410747 107 ntBASIC-0.5□□□□□ -2.49
HOXC4P09017 RNU6-172P-201ENST00000411000 93 ntBASIC-0.5□□□□□ -2.49
HOXC4P09017 MIR579-201ENST00000385221 98 ntBASIC-0.51□□□□□ -2.49
HOXC4P09017 AL353691.2-201ENST00000443795 59 ntBASIC-0.51□□□□□ -2.49
HOXC4P09017 AL500527.2-201ENST00000454105 95 ntBASIC-0.51□□□□□ -2.49
HOXC4P09017 RNU6-122P-201ENST00000516818 107 ntBASIC-0.51□□□□□ -2.49
HOXC4P09017 MIR5683-201ENST00000636514 76 ntBASIC-0.51□□□□□ -2.49
HOXC4P09017 RNU7-151P-201ENST00000516930 53 ntBASIC-0.52□□□□□ -2.49
HOXC4P09017 MIR548AX-201ENST00000580117 73 ntBASIC-0.52□□□□□ -2.49
HOXC4P09017 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-0.52□□□□□ -2.49
HOXC4P09017 MIR520D-201ENST00000385002 87 ntBASIC-0.53□□□□□ -2.49
HOXC4P09017 AC110620.1-201ENST00000416042 228 ntBASIC-0.53□□□□□ -2.49
HOXC4P09017 MIR382-201ENST00000637119 76 ntBASIC-0.53□□□□□ -2.49
HOXC4P09017 RNU6-471P-201ENST00000383944 106 ntBASIC-0.54□□□□□ -2.5
HOXC4P09017 MIR548AA1-201ENST00000384971 97 ntBASIC-0.54□□□□□ -2.5
HOXC4P09017 MIR507-201ENST00000385234 94 ntBASIC-0.54□□□□□ -2.5
HOXC4P09017 RPL35AP4-201ENST00000412007 102 ntBASIC-0.54□□□□□ -2.5
HOXC4P09017 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.54□□□□□ -2.5
HOXC4P09017 RNU6-231P-201ENST00000517122 103 ntBASIC-0.54□□□□□ -2.5
HOXC4P09017 MIR466-201ENST00000580653 84 ntBASIC-0.54□□□□□ -2.5
HOXC4P09017 MIR7978-201ENST00000636158 59 ntBASIC-0.54□□□□□ -2.5
HOXC4P09017 RNA5SP26-201ENST00000362406 119 ntBASIC-0.55□□□□□ -2.5
HOXC4P09017 MIR3170-201ENST00000582699 77 ntBASIC-0.55□□□□□ -2.5
HOXC4P09017 RNU6-940P-201ENST00000363433 104 ntBASIC-0.57□□□□□ -2.5
HOXC4P09017 RNU6-810P-201ENST00000364001 107 ntBASIC-0.57□□□□□ -2.5
HOXC4P09017 SNORD116.2-201ENST00000391251 93 ntBASIC-0.57□□□□□ -2.5
HOXC4P09017 MIR7110-201ENST00000612638 86 ntBASIC-0.57□□□□□ -2.5
HOXC4P09017 RNU6-608P-201ENST00000383927 104 ntBASIC-0.58□□□□□ -2.5
HOXC4P09017 MIR196A1-201ENST00000388006 70 ntBASIC-0.58□□□□□ -2.5
HOXC4P09017 RNU6-258P-201ENST00000390884 101 ntBASIC-0.58□□□□□ -2.5
HOXC4P09017 MIR3938-201ENST00000582157 103 ntBASIC-0.58□□□□□ -2.5
HOXC4P09017 MIR4490-201ENST00000582647 84 ntBASIC-0.58□□□□□ -2.5
HOXC4P09017 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.58□□□□□ -2.5
HOXC4P09017 MTRNR2L9-201ENST00000622562 75 ntBASIC-0.58□□□□□ -2.5
HOXC4P09017 RNU6-974P-201ENST00000384099 108 ntBASIC-0.59□□□□□ -2.5
HOXC4P09017 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-0.59□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 212.6 ms