Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 MIR1295B-201ENST00000636144 60 ntBASIC-0.22□□□□□ -2.44
HLA-DOAP06340 MIR6759-201ENST00000638110 65 ntBASIC-0.22□□□□□ -2.44
HLA-DOAP06340 RNU6-924P-201ENST00000362926 108 ntBASIC-0.23□□□□□ -2.45
HLA-DOAP06340 SNORD113-4-201ENST00000364802 75 ntBASIC-0.23□□□□□ -2.45
HLA-DOAP06340 RNA5SP300-201ENST00000391197 107 ntBASIC-0.23□□□□□ -2.45
HLA-DOAP06340 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.23□□□□□ -2.45
HLA-DOAP06340 AC079150.2-201ENST00000443733 78 ntBASIC-0.23□□□□□ -2.45
HLA-DOAP06340 RNU6-810P-201ENST00000364001 107 ntBASIC-0.24□□□□□ -2.45
HLA-DOAP06340 RNU6-696P-201ENST00000390834 107 ntBASIC-0.24□□□□□ -2.45
HLA-DOAP06340 SNORD18.2-201ENST00000459604 70 ntBASIC-0.24□□□□□ -2.45
HLA-DOAP06340 SNORA32.1-201ENST00000364514 115 ntBASIC-0.25□□□□□ -2.45
HLA-DOAP06340 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.25□□□□□ -2.45
HLA-DOAP06340 MIR7110-201ENST00000612638 86 ntBASIC-0.25□□□□□ -2.45
HLA-DOAP06340 RNU6-732P-201ENST00000516033 103 ntBASIC-0.26□□□□□ -2.45
HLA-DOAP06340 RNU7-151P-201ENST00000516930 53 ntBASIC-0.26□□□□□ -2.45
HLA-DOAP06340 MIR518B-201ENST00000385127 83 ntBASIC-0.27□□□□□ -2.45
HLA-DOAP06340 SNORD19-201ENST00000391191 68 ntBASIC-0.27□□□□□ -2.45
HLA-DOAP06340 RNU6-721P-201ENST00000410155 105 ntBASIC-0.27□□□□□ -2.45
HLA-DOAP06340 RNU6-1267P-201ENST00000410747 107 ntBASIC-0.27□□□□□ -2.45
HLA-DOAP06340 SNORA40.16-201ENST00000517238 121 ntBASIC-0.27□□□□□ -2.45
HLA-DOAP06340 RNU6-1312P-201ENST00000362425 108 ntBASIC-0.28□□□□□ -2.45
HLA-DOAP06340 MIR204-201ENST00000385200 110 ntBASIC-0.28□□□□□ -2.45
HLA-DOAP06340 SNORD57-201ENST00000448188 72 ntBASIC-0.28□□□□□ -2.45
HLA-DOAP06340 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-0.28□□□□□ -2.45
HLA-DOAP06340 AP000533.3-201ENST00000447704 118 ntBASIC-0.29□□□□□ -2.46
HLA-DOAP06340 MIR3179-1-201ENST00000578940 84 ntBASIC-0.29□□□□□ -2.46
HLA-DOAP06340 MIR3179-2-201ENST00000579107 84 ntBASIC-0.29□□□□□ -2.46
HLA-DOAP06340 MIR3179-3-201ENST00000579566 84 ntBASIC-0.29□□□□□ -2.46
HLA-DOAP06340 MIR3179-4-201ENST00000617599 84 ntBASIC-0.29□□□□□ -2.46
HLA-DOAP06340 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.3□□□□□ -2.46
HLA-DOAP06340 AP002795.1-201ENST00000534879 84 ntBASIC-0.3□□□□□ -2.46
HLA-DOAP06340 MIR7978-201ENST00000636158 59 ntBASIC-0.3□□□□□ -2.46
HLA-DOAP06340 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.31□□□□□ -2.46
HLA-DOAP06340 SNORD75.1-201ENST00000408373 60 ntBASIC-0.31□□□□□ -2.46
HLA-DOAP06340 SNORD63.1-201ENST00000516178 80 ntBASIC-0.31□□□□□ -2.46
HLA-DOAP06340 MIR4490-201ENST00000582647 84 ntBASIC-0.31□□□□□ -2.46
HLA-DOAP06340 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.32□□□□□ -2.46
HLA-DOAP06340 RNU7-119P-201ENST00000459279 63 ntBASIC-0.32□□□□□ -2.46
HLA-DOAP06340 SNORD114-17-201ENST00000364699 75 ntBASIC-0.33□□□□□ -2.46
HLA-DOAP06340 SNORD74.6-201ENST00000364796 70 ntBASIC-0.33□□□□□ -2.46
HLA-DOAP06340 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.33□□□□□ -2.46
HLA-DOAP06340 RNU6-520P-201ENST00000384717 104 ntBASIC-0.33□□□□□ -2.46
HLA-DOAP06340 MIR548AA1-201ENST00000384971 97 ntBASIC-0.33□□□□□ -2.46
HLA-DOAP06340 SNORA40B-201ENST00000385573 128 ntBASIC-0.34□□□□□ -2.46
HLA-DOAP06340 MIR548Q-201ENST00000408404 100 ntBASIC-0.34□□□□□ -2.46
HLA-DOAP06340 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.35□□□□□ -2.47
HLA-DOAP06340 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-0.36□□□□□ -2.47
HLA-DOAP06340 RNU6-974P-201ENST00000384099 108 ntBASIC-0.37□□□□□ -2.47
HLA-DOAP06340 MIR214-201ENST00000385214 110 ntBASIC-0.37□□□□□ -2.47
HLA-DOAP06340 MTND4LP19-201ENST00000403051 166 ntBASIC-0.37□□□□□ -2.47
HLA-DOAP06340 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.38□□□□□ -2.47
HLA-DOAP06340 MIR520D-201ENST00000385002 87 ntBASIC-0.38□□□□□ -2.47
HLA-DOAP06340 SNORA26.4-201ENST00000391188 123 ntBASIC-0.38□□□□□ -2.47
HLA-DOAP06340 MIR3170-201ENST00000582699 77 ntBASIC-0.38□□□□□ -2.47
HLA-DOAP06340 RNU6-995P-201ENST00000391244 107 ntBASIC-0.39□□□□□ -2.47
HLA-DOAP06340 IGLVI-20-201ENST00000519296 130 ntBASIC-0.39□□□□□ -2.47
HLA-DOAP06340 Y_RNA.69-201ENST00000362885 109 ntBASIC-0.4□□□□□ -2.47
HLA-DOAP06340 MIR196A2-201ENST00000385189 110 ntBASIC-0.4□□□□□ -2.47
HLA-DOAP06340 MIR4436A-201ENST00000585278 85 ntBASIC-0.4□□□□□ -2.47
HLA-DOAP06340 MIR125B1-201ENST00000385236 88 ntBASIC-0.41□□□□□ -2.48
HLA-DOAP06340 SNORA3B-201ENST00000391305 131 ntBASIC-0.42□□□□□ -2.48
HLA-DOAP06340 SNORD126-201ENST00000459475 77 ntBASIC-0.42□□□□□ -2.48
HLA-DOAP06340 MIR4802-201ENST00000581881 80 ntBASIC-0.42□□□□□ -2.48
HLA-DOAP06340 MTRNR2L9-201ENST00000622562 75 ntBASIC-0.42□□□□□ -2.48
HLA-DOAP06340 SNORD114-31-201ENST00000363219 75 ntBASIC-0.43□□□□□ -2.48
HLA-DOAP06340 RNU6-614P-201ENST00000384369 107 ntBASIC-0.43□□□□□ -2.48
HLA-DOAP06340 RNU6-35P-201ENST00000384530 107 ntBASIC-0.43□□□□□ -2.48
HLA-DOAP06340 RNU6-258P-201ENST00000390884 101 ntBASIC-0.43□□□□□ -2.48
HLA-DOAP06340 MIR5589-201ENST00000579442 60 ntBASIC-0.43□□□□□ -2.48
HLA-DOAP06340 U6.59-201ENST00000615686 107 ntBASIC-0.43□□□□□ -2.48
HLA-DOAP06340 Y_RNA.139-201ENST00000363464 102 ntBASIC-0.44□□□□□ -2.48
HLA-DOAP06340 SNORA13-201ENST00000458790 133 ntBASIC-0.44□□□□□ -2.48
HLA-DOAP06340 RNU6-320P-201ENST00000516511 106 ntBASIC-0.44□□□□□ -2.48
HLA-DOAP06340 MIR4636-201ENST00000582271 80 ntBASIC-0.44□□□□□ -2.48
HLA-DOAP06340 MIR5683-201ENST00000636514 76 ntBASIC-0.44□□□□□ -2.48
HLA-DOAP06340 SNORD115-33-201ENST00000363723 82 ntBASIC-0.45□□□□□ -2.48
HLA-DOAP06340 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.45□□□□□ -2.48
HLA-DOAP06340 AL353691.2-201ENST00000443795 59 ntBASIC-0.45□□□□□ -2.48
HLA-DOAP06340 SNORD63.2-201ENST00000516303 64 ntBASIC-0.45□□□□□ -2.48
HLA-DOAP06340 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.46□□□□□ -2.48
HLA-DOAP06340 RNU6-284P-201ENST00000411105 106 ntBASIC-0.46□□□□□ -2.48
HLA-DOAP06340 RNU6-1206P-201ENST00000516339 103 ntBASIC-0.46□□□□□ -2.48
HLA-DOAP06340 RNU7-160P-201ENST00000516660 62 ntBASIC-0.46□□□□□ -2.48
HLA-DOAP06340 RNU6-247P-201ENST00000362636 107 ntBASIC-0.47□□□□□ -2.48
HLA-DOAP06340 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.47□□□□□ -2.48
HLA-DOAP06340 RPL35AP4-201ENST00000412007 102 ntBASIC-0.47□□□□□ -2.48
HLA-DOAP06340 MIR4645-201ENST00000583158 77 ntBASIC-0.47□□□□□ -2.48
HLA-DOAP06340 RNU6-1111P-201ENST00000391118 107 ntBASIC-0.48□□□□□ -2.49
HLA-DOAP06340 AC021146.6-201ENST00000514659 117 ntBASIC-0.48□□□□□ -2.49
HLA-DOAP06340 SNORD14C-201ENST00000365382 88 ntBASIC-0.49□□□□□ -2.49
HLA-DOAP06340 RNU6-608P-201ENST00000383927 104 ntBASIC-0.5□□□□□ -2.49
HLA-DOAP06340 RNU6-828P-201ENST00000364876 107 ntBASIC-0.52□□□□□ -2.49
HLA-DOAP06340 RNU6-936P-201ENST00000384005 107 ntBASIC-0.52□□□□□ -2.49
HLA-DOAP06340 MIR507-201ENST00000385234 94 ntBASIC-0.52□□□□□ -2.49
HLA-DOAP06340 RNU6-431P-201ENST00000383874 107 ntBASIC-0.53□□□□□ -2.49
HLA-DOAP06340 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.53□□□□□ -2.49
HLA-DOAP06340 RNU6-419P-201ENST00000517030 63 ntBASIC-0.53□□□□□ -2.49
HLA-DOAP06340 MIR548X-201ENST00000580069 75 ntBASIC-0.53□□□□□ -2.49
HLA-DOAP06340 RNA5SP275-201ENST00000363936 118 ntBASIC-0.54□□□□□ -2.5
HLA-DOAP06340 RNU6-980P-201ENST00000516925 103 ntBASIC-0.54□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 1151.9 ms