Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.19□□□□□ -2.6
COL1A1P02452 SNORD116.2-201ENST00000391251 93 ntBASIC-1.19□□□□□ -2.6
COL1A1P02452 MIR513C-201ENST00000401352 84 ntBASIC-1.19□□□□□ -2.6
COL1A1P02452 AC074348.1-201ENST00000426503 132 ntBASIC-1.19□□□□□ -2.6
COL1A1P02452 MIR3128-201ENST00000581957 66 ntBASIC-1.19□□□□□ -2.6
COL1A1P02452 MIRLET7A3-201ENST00000362116 74 ntBASIC-1.2□□□□□ -2.6
COL1A1P02452 RNU6-742P-201ENST00000365289 107 ntBASIC-1.2□□□□□ -2.6
COL1A1P02452 RNU6-1296P-201ENST00000383879 107 ntBASIC-1.2□□□□□ -2.6
COL1A1P02452 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.2□□□□□ -2.6
COL1A1P02452 RNU6-985P-201ENST00000410182 104 ntBASIC-1.2□□□□□ -2.6
COL1A1P02452 MTND4LP1-201ENST00000446263 157 ntBASIC-1.2□□□□□ -2.6
COL1A1P02452 RNU6-875P-201ENST00000516488 106 ntBASIC-1.2□□□□□ -2.6
COL1A1P02452 RNU6-303P-201ENST00000517091 106 ntBASIC-1.2□□□□□ -2.6
COL1A1P02452 RNU6-834P-201ENST00000362367 110 ntBASIC-1.21□□□□□ -2.6
COL1A1P02452 RNA5SP215-201ENST00000363440 122 ntBASIC-1.21□□□□□ -2.6
COL1A1P02452 RNU6-361P-201ENST00000364454 107 ntBASIC-1.21□□□□□ -2.6
COL1A1P02452 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.21□□□□□ -2.6
COL1A1P02452 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.21□□□□□ -2.6
COL1A1P02452 SNORD116-18-201ENST00000383961 92 ntBASIC-1.21□□□□□ -2.6
COL1A1P02452 RNU6-1227P-201ENST00000383981 107 ntBASIC-1.21□□□□□ -2.6
COL1A1P02452 SNORD116-24-201ENST00000384549 92 ntBASIC-1.21□□□□□ -2.6
COL1A1P02452 Y_RNA.566-201ENST00000384735 101 ntBASIC-1.21□□□□□ -2.6
COL1A1P02452 MIR569-201ENST00000385228 96 ntBASIC-1.21□□□□□ -2.6
COL1A1P02452 Y_RNA.652-201ENST00000458902 102 ntBASIC-1.21□□□□□ -2.6
COL1A1P02452 AL731768.1-201ENST00000603124 139 ntBASIC-1.21□□□□□ -2.6
COL1A1P02452 U7.2-201ENST00000607576 63 ntBASIC-1.21□□□□□ -2.6
COL1A1P02452 MIR4426-201ENST00000640330 63 ntBASIC-1.21□□□□□ -2.6
COL1A1P02452 Y_RNA.47-201ENST00000362697 108 ntBASIC-1.22□□□□□ -2.6
COL1A1P02452 RNU6-737P-201ENST00000365370 107 ntBASIC-1.22□□□□□ -2.6
COL1A1P02452 RNU6-804P-201ENST00000384286 107 ntBASIC-1.22□□□□□ -2.6
COL1A1P02452 Y_RNA.586-201ENST00000391146 98 ntBASIC-1.22□□□□□ -2.6
COL1A1P02452 SNORD58.1-201ENST00000391313 66 ntBASIC-1.22□□□□□ -2.6
COL1A1P02452 AC093729.1-201ENST00000513074 128 ntBASIC-1.22□□□□□ -2.6
COL1A1P02452 RNU6-803P-201ENST00000516034 102 ntBASIC-1.22□□□□□ -2.6
COL1A1P02452 RNU6-426P-201ENST00000516464 97 ntBASIC-1.22□□□□□ -2.6
COL1A1P02452 MIR3171-201ENST00000584270 74 ntBASIC-1.22□□□□□ -2.6
COL1A1P02452 U6.104-201ENST00000637979 90 ntBASIC-1.22□□□□□ -2.6
COL1A1P02452 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.23□□□□□ -2.61
COL1A1P02452 RNU6-633P-201ENST00000362612 103 ntBASIC-1.23□□□□□ -2.61
COL1A1P02452 RNU6-1107P-201ENST00000364817 104 ntBASIC-1.23□□□□□ -2.61
COL1A1P02452 Y_RNA.619-201ENST00000410951 90 ntBASIC-1.23□□□□□ -2.61
COL1A1P02452 MTND4LP9-201ENST00000427694 174 ntBASIC-1.23□□□□□ -2.61
COL1A1P02452 MIR548X2-201ENST00000579776 100 ntBASIC-1.23□□□□□ -2.61
COL1A1P02452 MIR4668-201ENST00000582284 70 ntBASIC-1.23□□□□□ -2.61
COL1A1P02452 AC004792.1-201ENST00000614523 137 ntBASIC-1.23□□□□□ -2.61
COL1A1P02452 Y_RNA.20-201ENST00000362479 113 ntBASIC-1.24□□□□□ -2.61
COL1A1P02452 Y_RNA.59-201ENST00000362828 102 ntBASIC-1.24□□□□□ -2.61
COL1A1P02452 Y_RNA.200-201ENST00000364018 102 ntBASIC-1.24□□□□□ -2.61
COL1A1P02452 RNU6-755P-201ENST00000364400 103 ntBASIC-1.24□□□□□ -2.61
COL1A1P02452 RNU6-590P-201ENST00000365039 107 ntBASIC-1.24□□□□□ -2.61
COL1A1P02452 SNORA19-201ENST00000384737 128 ntBASIC-1.24□□□□□ -2.61
COL1A1P02452 RNU6-907P-201ENST00000390924 102 ntBASIC-1.24□□□□□ -2.61
COL1A1P02452 Y_RNA.604-201ENST00000410574 102 ntBASIC-1.24□□□□□ -2.61
COL1A1P02452 RNU6-300P-201ENST00000459080 104 ntBASIC-1.24□□□□□ -2.61
COL1A1P02452 RNU6-182P-201ENST00000516970 105 ntBASIC-1.24□□□□□ -2.61
COL1A1P02452 MTND5P41-201ENST00000517498 206 ntBASIC-1.24□□□□□ -2.61
COL1A1P02452 MIR7110-201ENST00000612638 86 ntBASIC-1.24□□□□□ -2.61
COL1A1P02452 SNORD60.1-201ENST00000362451 73 ntBASIC-1.24□□□□□ -2.61
COL1A1P02452 SNORD115-37-201ENST00000363768 82 ntBASIC-1.24□□□□□ -2.61
COL1A1P02452 Y_RNA.240-201ENST00000364469 95 ntBASIC-1.24□□□□□ -2.61
COL1A1P02452 RNU6-686P-201ENST00000364839 107 ntBASIC-1.24□□□□□ -2.61
COL1A1P02452 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.24□□□□□ -2.61
COL1A1P02452 Y_RNA.459-201ENST00000384251 102 ntBASIC-1.24□□□□□ -2.61
COL1A1P02452 Y_RNA.511-201ENST00000384514 103 ntBASIC-1.24□□□□□ -2.61
COL1A1P02452 Y_RNA.574-201ENST00000384766 95 ntBASIC-1.24□□□□□ -2.61
COL1A1P02452 RNU6-231P-201ENST00000517122 103 ntBASIC-1.24□□□□□ -2.61
COL1A1P02452 AC020661.2-201ENST00000560114 134 ntBASIC-1.24□□□□□ -2.61
COL1A1P02452 Y_RNA.460-201ENST00000384255 102 ntBASIC-1.25□□□□□ -2.61
COL1A1P02452 SNORD115-45-201ENST00000391078 81 ntBASIC-1.25□□□□□ -2.61
COL1A1P02452 RNU6-402P-201ENST00000410678 103 ntBASIC-1.25□□□□□ -2.61
COL1A1P02452 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.25□□□□□ -2.61
COL1A1P02452 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.25□□□□□ -2.61
COL1A1P02452 RNU6-659P-201ENST00000516454 104 ntBASIC-1.25□□□□□ -2.61
COL1A1P02452 RNU6-971P-201ENST00000516920 106 ntBASIC-1.25□□□□□ -2.61
COL1A1P02452 MIR548BB-201ENST00000626714 66 ntBASIC-1.25□□□□□ -2.61
COL1A1P02452 MIR379-201ENST00000362218 67 ntBASIC-1.26□□□□□ -2.61
COL1A1P02452 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.26□□□□□ -2.61
COL1A1P02452 RNU4-71P-201ENST00000516258 113 ntBASIC-1.26□□□□□ -2.61
COL1A1P02452 RNU6-789P-201ENST00000517105 102 ntBASIC-1.26□□□□□ -2.61
COL1A1P02452 SNORA40.16-201ENST00000517238 121 ntBASIC-1.26□□□□□ -2.61
COL1A1P02452 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.27□□□□□ -2.61
COL1A1P02452 Y_RNA.107-201ENST00000363190 121 ntBASIC-1.27□□□□□ -2.61
COL1A1P02452 Y_RNA.218-201ENST00000364218 104 ntBASIC-1.27□□□□□ -2.61
COL1A1P02452 Y_RNA.266-201ENST00000364678 96 ntBASIC-1.27□□□□□ -2.61
COL1A1P02452 RNU6-219P-201ENST00000364728 107 ntBASIC-1.27□□□□□ -2.61
COL1A1P02452 Y_RNA.281-201ENST00000364774 94 ntBASIC-1.27□□□□□ -2.61
COL1A1P02452 MIR509-1-201ENST00000385265 94 ntBASIC-1.27□□□□□ -2.61
COL1A1P02452 MIR509-2-201ENST00000390724 91 ntBASIC-1.27□□□□□ -2.61
COL1A1P02452 Y_RNA.662-201ENST00000516028 97 ntBASIC-1.27□□□□□ -2.61
COL1A1P02452 Y_RNA.663-201ENST00000516043 101 ntBASIC-1.27□□□□□ -2.61
COL1A1P02452 SCARNA15.1-201ENST00000516384 125 ntBASIC-1.27□□□□□ -2.61
COL1A1P02452 RNU7-160P-201ENST00000516660 62 ntBASIC-1.27□□□□□ -2.61
COL1A1P02452 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.27□□□□□ -2.61
COL1A1P02452 MIR3914-2-201ENST00000637339 95 ntBASIC-1.27□□□□□ -2.61
COL1A1P02452 SNORA63.4-201ENST00000362763 126 ntBASIC-1.28□□□□□ -2.61
COL1A1P02452 Y_RNA.297-201ENST00000364950 91 ntBASIC-1.28□□□□□ -2.61
COL1A1P02452 RNY4P10-201ENST00000365571 96 ntBASIC-1.28□□□□□ -2.61
COL1A1P02452 RNU6-196P-201ENST00000384315 107 ntBASIC-1.28□□□□□ -2.61
COL1A1P02452 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.28□□□□□ -2.61
COL1A1P02452 RNU6-129P-201ENST00000391022 107 ntBASIC-1.28□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 262.9 ms