Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 SNORA8.1-201ENST00000384250 140 ntBASIC-1.6□□□□□ -2.67
SIX3O95343 U6.58-201ENST00000613107 107 ntBASIC-1.6□□□□□ -2.67
SIX3O95343 MIR548BB-201ENST00000626714 66 ntBASIC-1.6□□□□□ -2.67
SIX3O95343 RNU6-164P-201ENST00000364604 103 ntBASIC-1.61□□□□□ -2.67
SIX3O95343 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.61□□□□□ -2.67
SIX3O95343 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.61□□□□□ -2.67
SIX3O95343 RNU6-303P-201ENST00000517091 106 ntBASIC-1.61□□□□□ -2.67
SIX3O95343 MALAT1.1-201ENST00000618249 95 ntBASIC-1.62□□□□□ -2.67
SIX3O95343 RNU6-478P-201ENST00000363904 110 ntBASIC-1.63□□□□□ -2.67
SIX3O95343 RNU6-686P-201ENST00000364839 107 ntBASIC-1.63□□□□□ -2.67
SIX3O95343 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.63□□□□□ -2.67
SIX3O95343 AP001318.4-201ENST00000616637 121 ntBASIC-1.63□□□□□ -2.67
SIX3O95343 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.64□□□□□ -2.67
SIX3O95343 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.64□□□□□ -2.67
SIX3O95343 RNA5SP86-201ENST00000390869 98 ntBASIC-1.64□□□□□ -2.67
SIX3O95343 AC090616.4-201ENST00000448026 115 ntBASIC-1.64□□□□□ -2.67
SIX3O95343 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.65□□□□□ -2.67
SIX3O95343 MIR548H1-201ENST00000408610 102 ntBASIC-1.65□□□□□ -2.67
SIX3O95343 RNU7-174P-201ENST00000516248 59 ntBASIC-1.65□□□□□ -2.67
SIX3O95343 MIR3910-1-201ENST00000580936 111 ntBASIC-1.65□□□□□ -2.67
SIX3O95343 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.66□□□□□ -2.68
SIX3O95343 RNU6-219P-201ENST00000364728 107 ntBASIC-1.66□□□□□ -2.68
SIX3O95343 MIR630-201ENST00000384957 97 ntBASIC-1.66□□□□□ -2.68
SIX3O95343 RNU6-129P-201ENST00000391022 107 ntBASIC-1.67□□□□□ -2.68
SIX3O95343 RNY4P18-201ENST00000391107 89 ntBASIC-1.67□□□□□ -2.68
SIX3O95343 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.67□□□□□ -2.68
SIX3O95343 MIR429-201ENST00000362106 83 ntBASIC-1.68□□□□□ -2.68
SIX3O95343 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.68□□□□□ -2.68
SIX3O95343 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.68□□□□□ -2.68
SIX3O95343 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.68□□□□□ -2.68
SIX3O95343 RNU6-696P-201ENST00000390834 107 ntBASIC-1.68□□□□□ -2.68
SIX3O95343 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.69□□□□□ -2.68
SIX3O95343 RNU6-630P-201ENST00000391258 106 ntBASIC-1.69□□□□□ -2.68
SIX3O95343 RNU6-380P-201ENST00000410207 107 ntBASIC-1.69□□□□□ -2.68
SIX3O95343 RNU6-557P-201ENST00000516842 110 ntBASIC-1.69□□□□□ -2.68
SIX3O95343 RNU6-32P-201ENST00000383948 107 ntBASIC-1.7□□□□□ -2.68
SIX3O95343 RNU6-13P-201ENST00000384248 107 ntBASIC-1.7□□□□□ -2.68
SIX3O95343 RNU6-12P-201ENST00000384604 107 ntBASIC-1.7□□□□□ -2.68
SIX3O95343 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.7□□□□□ -2.68
SIX3O95343 RNU6-41P-201ENST00000384741 107 ntBASIC-1.7□□□□□ -2.68
SIX3O95343 MTND4LP1-201ENST00000446263 157 ntBASIC-1.7□□□□□ -2.68
SIX3O95343 RNU6-668P-201ENST00000364180 107 ntBASIC-1.71□□□□□ -2.68
SIX3O95343 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.71□□□□□ -2.68
SIX3O95343 MIR664B-201ENST00000626756 61 ntBASIC-1.71□□□□□ -2.68
SIX3O95343 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.72□□□□□ -2.68
SIX3O95343 RNU6-598P-201ENST00000364017 105 ntBASIC-1.72□□□□□ -2.68
SIX3O95343 RNU6-587P-201ENST00000391282 106 ntBASIC-1.72□□□□□ -2.68
SIX3O95343 AC018880.2-201ENST00000414265 201 ntBASIC-1.72□□□□□ -2.68
SIX3O95343 RNU6-698P-201ENST00000363523 107 ntBASIC-1.73□□□□□ -2.69
SIX3O95343 RNU6-34P-201ENST00000364874 107 ntBASIC-1.73□□□□□ -2.69
SIX3O95343 AC074348.1-201ENST00000426503 132 ntBASIC-1.73□□□□□ -2.69
SIX3O95343 RNU6-168P-201ENST00000516189 101 ntBASIC-1.73□□□□□ -2.69
SIX3O95343 U2.18-201ENST00000622185 84 ntBASIC-1.73□□□□□ -2.69
SIX3O95343 AC006160.2-201ENST00000637708 154 ntBASIC-1.73□□□□□ -2.69
SIX3O95343 RNU6-1134P-201ENST00000365156 101 ntBASIC-1.74□□□□□ -2.69
SIX3O95343 MIR488-201ENST00000365739 83 ntBASIC-1.74□□□□□ -2.69
SIX3O95343 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.74□□□□□ -2.69
SIX3O95343 U4.4-201ENST00000620626 117 ntBASIC-1.74□□□□□ -2.69
SIX3O95343 SNORA63.4-201ENST00000362763 126 ntBASIC-1.75□□□□□ -2.69
SIX3O95343 RNA5SP405-201ENST00000363059 114 ntBASIC-1.75□□□□□ -2.69
SIX3O95343 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.75□□□□□ -2.69
SIX3O95343 AC108019.1-201ENST00000512540 175 ntBASIC-1.75□□□□□ -2.69
SIX3O95343 MIR4756-201ENST00000577874 78 ntBASIC-1.75□□□□□ -2.69
SIX3O95343 MIR664A-201ENST00000626086 82 ntBASIC-1.75□□□□□ -2.69
SIX3O95343 AL606753.1-201ENST00000427435 87 ntBASIC-1.76□□□□□ -2.69
SIX3O95343 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.76□□□□□ -2.69
SIX3O95343 IGLL4P-201ENST00000614590 133 ntBASIC-1.76□□□□□ -2.69
SIX3O95343 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.77□□□□□ -2.69
SIX3O95343 SNORD45A-201ENST00000384512 84 ntBASIC-1.77□□□□□ -2.69
SIX3O95343 MIR487B-201ENST00000385021 84 ntBASIC-1.77□□□□□ -2.69
SIX3O95343 SNORD113.1-201ENST00000363280 73 ntBASIC-1.78□□□□□ -2.69
SIX3O95343 Y_RNA.658-201ENST00000515990 97 ntBASIC-1.78□□□□□ -2.69
SIX3O95343 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.78□□□□□ -2.69
SIX3O95343 MIR1297-201ENST00000637311 77 ntBASIC-1.78□□□□□ -2.69
SIX3O95343 RNU6-755P-201ENST00000364400 103 ntBASIC-1.79□□□□□ -2.7
SIX3O95343 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.79□□□□□ -2.7
SIX3O95343 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.79□□□□□ -2.7
SIX3O95343 SNORD113-2-201ENST00000391082 72 ntBASIC-1.79□□□□□ -2.7
SIX3O95343 RNU6-400P-201ENST00000391173 106 ntBASIC-1.79□□□□□ -2.7
SIX3O95343 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.79□□□□□ -2.7
SIX3O95343 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.8□□□□□ -2.7
SIX3O95343 RNU6-608P-201ENST00000383927 104 ntBASIC-1.8□□□□□ -2.7
SIX3O95343 RNU6-844P-201ENST00000517175 102 ntBASIC-1.8□□□□□ -2.7
SIX3O95343 RNU6-230P-201ENST00000362457 104 ntBASIC-1.81□□□□□ -2.7
SIX3O95343 RNU6-79P-201ENST00000362511 107 ntBASIC-1.81□□□□□ -2.7
SIX3O95343 Y_RNA.73-201ENST00000362910 113 ntBASIC-1.81□□□□□ -2.7
SIX3O95343 RNY1P1-201ENST00000364372 112 ntBASIC-1.81□□□□□ -2.7
SIX3O95343 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.81□□□□□ -2.7
SIX3O95343 MIR8053-201ENST00000613344 75 ntBASIC-1.81□□□□□ -2.7
SIX3O95343 RNU6-247P-201ENST00000362636 107 ntBASIC-1.82□□□□□ -2.7
SIX3O95343 RNU6-497P-201ENST00000365316 104 ntBASIC-1.82□□□□□ -2.7
SIX3O95343 MIR520D-201ENST00000385002 87 ntBASIC-1.82□□□□□ -2.7
SIX3O95343 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.83□□□□□ -2.7
SIX3O95343 RNA5SP215-201ENST00000363440 122 ntBASIC-1.84□□□□□ -2.7
SIX3O95343 RNU6-640P-201ENST00000363693 105 ntBASIC-1.84□□□□□ -2.7
SIX3O95343 RNU6-194P-201ENST00000363862 105 ntBASIC-1.84□□□□□ -2.7
SIX3O95343 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.84□□□□□ -2.7
SIX3O95343 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.85□□□□□ -2.71
SIX3O95343 RNU6-1131P-201ENST00000364955 107 ntBASIC-1.85□□□□□ -2.71
SIX3O95343 RNU6-147P-201ENST00000383983 107 ntBASIC-1.85□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 9.5 ms