Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 RNU6-810P-201ENST00000364001 107 ntBASIC0.29□□□□□ -2.36
SOX1O00570 RNU6-598P-201ENST00000364017 105 ntBASIC0.29□□□□□ -2.36
SOX1O00570 RNU7-159P-201ENST00000459284 62 ntBASIC0.29□□□□□ -2.36
SOX1O00570 RNU6-1262P-201ENST00000516217 96 ntBASIC0.27□□□□□ -2.37
SOX1O00570 RNU6-696P-201ENST00000390834 107 ntBASIC0.26□□□□□ -2.37
SOX1O00570 SNORD114-31-201ENST00000363219 75 ntBASIC0.25□□□□□ -2.37
SOX1O00570 SNORD114-9-201ENST00000364370 72 ntBASIC0.25□□□□□ -2.37
SOX1O00570 RNU6-901P-201ENST00000384593 106 ntBASIC0.25□□□□□ -2.37
SOX1O00570 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC0.25□□□□□ -2.37
SOX1O00570 RNU6-924P-201ENST00000362926 108 ntBASIC0.24□□□□□ -2.37
SOX1O00570 MIR1468-201ENST00000410600 86 ntBASIC0.24□□□□□ -2.37
SOX1O00570 AC244250.2-201ENST00000418731 148 ntBASIC0.24□□□□□ -2.37
SOX1O00570 U7.5-201ENST00000517224 61 ntBASIC0.24□□□□□ -2.37
SOX1O00570 MIR6854-201ENST00000614935 69 ntBASIC0.24□□□□□ -2.37
SOX1O00570 U2.18-201ENST00000622185 84 ntBASIC0.24□□□□□ -2.37
SOX1O00570 MIR548AA1-201ENST00000384971 97 ntBASIC0.23□□□□□ -2.37
SOX1O00570 RNU7-160P-201ENST00000516660 62 ntBASIC0.22□□□□□ -2.37
SOX1O00570 MIR5704-201ENST00000584029 77 ntBASIC0.22□□□□□ -2.37
SOX1O00570 MIR655-201ENST00000362159 97 ntBASIC0.21□□□□□ -2.38
SOX1O00570 RNU6-46P-201ENST00000383860 107 ntBASIC0.21□□□□□ -2.38
SOX1O00570 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC0.21□□□□□ -2.38
SOX1O00570 Y_RNA.613-201ENST00000410726 97 ntBASIC0.21□□□□□ -2.38
SOX1O00570 RNU7-151P-201ENST00000516930 53 ntBASIC0.21□□□□□ -2.38
SOX1O00570 MIR4490-201ENST00000582647 84 ntBASIC0.21□□□□□ -2.38
SOX1O00570 Y_RNA.610-201ENST00000410681 103 ntBASIC0.2□□□□□ -2.38
SOX1O00570 RNU7-88P-201ENST00000458752 63 ntBASIC0.2□□□□□ -2.38
SOX1O00570 MIR548X-201ENST00000580069 75 ntBASIC0.2□□□□□ -2.38
SOX1O00570 MIR5093-201ENST00000583199 100 ntBASIC0.2□□□□□ -2.38
SOX1O00570 SNORD114-5-201ENST00000362928 70 ntBASIC0.19□□□□□ -2.38
SOX1O00570 SNORD56B-201ENST00000384713 71 ntBASIC0.19□□□□□ -2.38
SOX1O00570 RNU6-995P-201ENST00000391244 107 ntBASIC0.19□□□□□ -2.38
SOX1O00570 MIR1295A-201ENST00000408463 79 ntBASIC0.19□□□□□ -2.38
SOX1O00570 RNU6-1174P-201ENST00000517278 101 ntBASIC0.19□□□□□ -2.38
SOX1O00570 MIR4768-201ENST00000585270 74 ntBASIC0.19□□□□□ -2.38
SOX1O00570 MIR101-1-201ENST00000362265 75 ntBASIC0.18□□□□□ -2.38
SOX1O00570 MIR579-201ENST00000385221 98 ntBASIC0.18□□□□□ -2.38
SOX1O00570 RNU6-980P-201ENST00000516925 103 ntBASIC0.18□□□□□ -2.38
SOX1O00570 MIR8068-201ENST00000618032 68 ntBASIC0.18□□□□□ -2.38
SOX1O00570 MIR371B-201ENST00000638082 66 ntBASIC0.18□□□□□ -2.38
SOX1O00570 Y_RNA.379-201ENST00000365653 102 ntBASIC0.16□□□□□ -2.38
SOX1O00570 SNORD57-201ENST00000448188 72 ntBASIC0.16□□□□□ -2.38
SOX1O00570 SNORD63.1-201ENST00000516178 80 ntBASIC0.16□□□□□ -2.38
SOX1O00570 RNU4-33P-201ENST00000364316 85 ntBASIC0.15□□□□□ -2.39
SOX1O00570 MIR124-2-201ENST00000385081 109 ntBASIC0.15□□□□□ -2.39
SOX1O00570 AC114755.3-201ENST00000481111 251 ntBASIC0.15□□□□□ -2.39
SOX1O00570 MIR4280-201ENST00000582178 76 ntBASIC0.15□□□□□ -2.39
SOX1O00570 SNORD49B-201ENST00000365172 72 ntBASIC0.14□□□□□ -2.39
SOX1O00570 RNU6-929P-201ENST00000384429 107 ntBASIC0.14□□□□□ -2.39
SOX1O00570 SNX3P1X-201ENST00000414887 175 ntBASIC0.13□□□□□ -2.39
SOX1O00570 RNU6-419P-201ENST00000517030 63 ntBASIC0.13□□□□□ -2.39
SOX1O00570 RNU6-753P-201ENST00000363926 107 ntBASIC0.12□□□□□ -2.39
SOX1O00570 RNU6-1267P-201ENST00000410747 107 ntBASIC0.12□□□□□ -2.39
SOX1O00570 RNU6-1206P-201ENST00000516339 103 ntBASIC0.12□□□□□ -2.39
SOX1O00570 Y_RNA.69-201ENST00000362885 109 ntBASIC0.11□□□□□ -2.39
SOX1O00570 AL445193.1-201ENST00000441183 141 ntBASIC0.11□□□□□ -2.39
SOX1O00570 MIR3681-201ENST00000580089 72 ntBASIC0.1□□□□□ -2.39
SOX1O00570 MIR4290-201ENST00000583807 95 ntBASIC0.1□□□□□ -2.39
SOX1O00570 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC0.1□□□□□ -2.39
SOX1O00570 MIR125B1-201ENST00000385236 88 ntBASIC0.09□□□□□ -2.4
SOX1O00570 MIR4667-201ENST00000578933 66 ntBASIC0.09□□□□□ -2.4
SOX1O00570 MIR548AX-201ENST00000580117 73 ntBASIC0.09□□□□□ -2.4
SOX1O00570 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.09□□□□□ -2.4
SOX1O00570 RNU6-1238P-201ENST00000517215 102 ntBASIC0.08□□□□□ -2.4
SOX1O00570 SNORD114-16-201ENST00000363044 70 ntBASIC0.07□□□□□ -2.4
SOX1O00570 SNORD74.6-201ENST00000364796 70 ntBASIC0.07□□□□□ -2.4
SOX1O00570 RNU6-828P-201ENST00000364876 107 ntBASIC0.07□□□□□ -2.4
SOX1O00570 RPS29P8-201ENST00000445109 171 ntBASIC0.07□□□□□ -2.4
SOX1O00570 RNU6-732P-201ENST00000516033 103 ntBASIC0.07□□□□□ -2.4
SOX1O00570 MIR6851-201ENST00000617060 67 ntBASIC0.07□□□□□ -2.4
SOX1O00570 MIR1295B-201ENST00000636144 60 ntBASIC0.07□□□□□ -2.4
SOX1O00570 MIR214-201ENST00000385214 110 ntBASIC0.06□□□□□ -2.4
SOX1O00570 RNU4-88P-201ENST00000411220 86 ntBASIC0.05□□□□□ -2.4
SOX1O00570 RNA5SP66-201ENST00000517178 101 ntBASIC0.05□□□□□ -2.4
SOX1O00570 MIR4263-201ENST00000584745 83 ntBASIC0.05□□□□□ -2.4
SOX1O00570 SNORA18.1-201ENST00000363418 128 ntBASIC0.04□□□□□ -2.4
SOX1O00570 SNORD38.3-201ENST00000516599 73 ntBASIC0.04□□□□□ -2.4
SOX1O00570 MIR4645-201ENST00000583158 77 ntBASIC0.04□□□□□ -2.4
SOX1O00570 RNU6-1233P-201ENST00000362922 102 ntBASIC0.03□□□□□ -2.4
SOX1O00570 SNORD114-12-201ENST00000365400 75 ntBASIC0.02□□□□□ -2.41
SOX1O00570 RNY1P9-201ENST00000532431 109 ntBASIC0.02□□□□□ -2.41
SOX1O00570 AL590491.3-201ENST00000610731 82 ntBASIC0.02□□□□□ -2.41
SOX1O00570 MIR518B-201ENST00000385127 83 ntBASIC0.01□□□□□ -2.41
SOX1O00570 SNORD18.2-201ENST00000459604 70 ntBASIC0.01□□□□□ -2.41
SOX1O00570 MIR3170-201ENST00000582699 77 ntBASIC0.01□□□□□ -2.41
SOX1O00570 AC093726.3-201ENST00000637588 150 ntBASIC0.01□□□□□ -2.41
SOX1O00570 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC0□□□□□ -2.41
SOX1O00570 MIR8064-201ENST00000612863 90 ntBASIC0□□□□□ -2.41
SOX1O00570 SNORD45.2-201ENST00000363552 72 ntBASIC-0.01□□□□□ -2.41
SOX1O00570 MIR548Q-201ENST00000408404 100 ntBASIC-0.01□□□□□ -2.41
SOX1O00570 Y_RNA.139-201ENST00000363464 102 ntBASIC-0.02□□□□□ -2.41
SOX1O00570 SNORD114-28-201ENST00000363610 72 ntBASIC-0.02□□□□□ -2.41
SOX1O00570 MIR224-201ENST00000384889 81 ntBASIC-0.02□□□□□ -2.41
SOX1O00570 RNU6-1111P-201ENST00000391118 107 ntBASIC-0.02□□□□□ -2.41
SOX1O00570 AL451105.1-201ENST00000450005 189 ntBASIC-0.02□□□□□ -2.41
SOX1O00570 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.03□□□□□ -2.41
SOX1O00570 SNORD19-201ENST00000391191 68 ntBASIC-0.03□□□□□ -2.41
SOX1O00570 RNA5SP451-201ENST00000410588 110 ntBASIC-0.03□□□□□ -2.41
SOX1O00570 MIR3666-201ENST00000607845 111 ntBASIC-0.03□□□□□ -2.41
SOX1O00570 RNU6-247P-201ENST00000362636 107 ntBASIC-0.04□□□□□ -2.42
SOX1O00570 SNORA32.1-201ENST00000364514 115 ntBASIC-0.05□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 205.7 ms