Protein–RNA interactions for Protein: A6NHR9

SMCHD1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, humanhuman

Predictions only

Length 2,005 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1A6NHR9 MIR4662A-201ENST00000637499 67 ntBASIC-0.62□□□□□ -2.51
SMCHD1A6NHR9 MIR527-201ENST00000385244 85 ntBASIC-0.63□□□□□ -2.51
SMCHD1A6NHR9 RNU6-696P-201ENST00000390834 107 ntBASIC-0.63□□□□□ -2.51
SMCHD1A6NHR9 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.63□□□□□ -2.51
SMCHD1A6NHR9 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.63□□□□□ -2.51
SMCHD1A6NHR9 MIR429-201ENST00000362106 83 ntBASIC-0.64□□□□□ -2.51
SMCHD1A6NHR9 SNORA25.4-201ENST00000363666 124 ntBASIC-0.64□□□□□ -2.51
SMCHD1A6NHR9 RNA5SP192-201ENST00000364404 120 ntBASIC-0.64□□□□□ -2.51
SMCHD1A6NHR9 Y_RNA.545-201ENST00000384652 105 ntBASIC-0.64□□□□□ -2.51
SMCHD1A6NHR9 SNORD116-16-201ENST00000384533 92 ntBASIC-0.65□□□□□ -2.51
SMCHD1A6NHR9 MIR196A1-201ENST00000388006 70 ntBASIC-0.65□□□□□ -2.51
SMCHD1A6NHR9 RNU6-776P-201ENST00000364403 104 ntBASIC-0.66□□□□□ -2.52
SMCHD1A6NHR9 RNU6-1022P-201ENST00000365049 104 ntBASIC-0.66□□□□□ -2.52
SMCHD1A6NHR9 RNU6-471P-201ENST00000383944 106 ntBASIC-0.66□□□□□ -2.52
SMCHD1A6NHR9 RNU6-458P-201ENST00000384179 107 ntBASIC-0.66□□□□□ -2.52
SMCHD1A6NHR9 RNU6-24P-201ENST00000384440 107 ntBASIC-0.66□□□□□ -2.52
SMCHD1A6NHR9 U6.58-201ENST00000613107 107 ntBASIC-0.66□□□□□ -2.52
SMCHD1A6NHR9 MIR409-201ENST00000362237 79 ntBASIC-0.67□□□□□ -2.52
SMCHD1A6NHR9 RNU6-687P-201ENST00000516443 89 ntBASIC-0.67□□□□□ -2.52
SMCHD1A6NHR9 SNORD60.1-201ENST00000362451 73 ntBASIC-0.67□□□□□ -2.52
SMCHD1A6NHR9 RNU6-518P-201ENST00000516056 96 ntBASIC-0.67□□□□□ -2.52
SMCHD1A6NHR9 RNU6-523P-201ENST00000516304 54 ntBASIC-0.67□□□□□ -2.52
SMCHD1A6NHR9 RNU6-871P-201ENST00000516122 100 ntBASIC-0.68□□□□□ -2.52
SMCHD1A6NHR9 RNU6-539P-201ENST00000516665 103 ntBASIC-0.68□□□□□ -2.52
SMCHD1A6NHR9 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.69□□□□□ -2.52
SMCHD1A6NHR9 RNU6-30P-201ENST00000384561 107 ntBASIC-0.69□□□□□ -2.52
SMCHD1A6NHR9 SNORD116-24-201ENST00000384549 92 ntBASIC-0.69□□□□□ -2.52
SMCHD1A6NHR9 MIR517B-201ENST00000385102 67 ntBASIC-0.69□□□□□ -2.52
SMCHD1A6NHR9 AL353691.2-201ENST00000443795 59 ntBASIC-0.7□□□□□ -2.52
SMCHD1A6NHR9 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.71□□□□□ -2.52
SMCHD1A6NHR9 RNU7-151P-201ENST00000516930 53 ntBASIC-0.71□□□□□ -2.52
SMCHD1A6NHR9 AP002795.1-201ENST00000534879 84 ntBASIC-0.71□□□□□ -2.52
SMCHD1A6NHR9 SNORD1B-201ENST00000363091 84 ntBASIC-0.71□□□□□ -2.52
SMCHD1A6NHR9 MIR4511-201ENST00000582784 87 ntBASIC-0.71□□□□□ -2.52
SMCHD1A6NHR9 RNU6-590P-201ENST00000365039 107 ntBASIC-0.72□□□□□ -2.52
SMCHD1A6NHR9 MIR548AA1-201ENST00000384971 97 ntBASIC-0.72□□□□□ -2.52
SMCHD1A6NHR9 RNU6-630P-201ENST00000391258 106 ntBASIC-0.72□□□□□ -2.52
SMCHD1A6NHR9 RNU6-92P-201ENST00000605893 104 ntBASIC-0.72□□□□□ -2.53
SMCHD1A6NHR9 RNU6-895P-201ENST00000384125 103 ntBASIC-0.73□□□□□ -2.53
SMCHD1A6NHR9 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.73□□□□□ -2.53
SMCHD1A6NHR9 SNORA41B-201ENST00000384785 128 ntBASIC-0.73□□□□□ -2.53
SMCHD1A6NHR9 SNORD83B-201ENST00000386745 93 ntBASIC-0.73□□□□□ -2.53
SMCHD1A6NHR9 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.73□□□□□ -2.53
SMCHD1A6NHR9 MIR548AG1-201ENST00000579932 66 ntBASIC-0.73□□□□□ -2.53
SMCHD1A6NHR9 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.73□□□□□ -2.53
SMCHD1A6NHR9 SNORD114-17-201ENST00000364699 75 ntBASIC-0.74□□□□□ -2.53
SMCHD1A6NHR9 AC005520.4-201ENST00000604337 90 ntBASIC-0.74□□□□□ -2.53
SMCHD1A6NHR9 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.74□□□□□ -2.53
SMCHD1A6NHR9 RNA5SP169-201ENST00000517268 117 ntBASIC-0.75□□□□□ -2.53
SMCHD1A6NHR9 MIR889-201ENST00000401280 79 ntBASIC-0.77□□□□□ -2.53
SMCHD1A6NHR9 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.77□□□□□ -2.53
SMCHD1A6NHR9 RNU6-431P-201ENST00000383874 107 ntBASIC-0.79□□□□□ -2.54
SMCHD1A6NHR9 MIR548C-201ENST00000384815 97 ntBASIC-0.79□□□□□ -2.54
SMCHD1A6NHR9 SNORD64-201ENST00000386683 67 ntBASIC-0.79□□□□□ -2.54
SMCHD1A6NHR9 MIR3938-201ENST00000582157 103 ntBASIC-0.79□□□□□ -2.54
SMCHD1A6NHR9 SNORD115-33-201ENST00000363723 82 ntBASIC-0.79□□□□□ -2.54
SMCHD1A6NHR9 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.79□□□□□ -2.54
SMCHD1A6NHR9 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.8□□□□□ -2.54
SMCHD1A6NHR9 RNU6-649P-201ENST00000384463 107 ntBASIC-0.8□□□□□ -2.54
SMCHD1A6NHR9 Y_RNA.443-201ENST00000384135 111 ntBASIC-0.81□□□□□ -2.54
SMCHD1A6NHR9 MIR548Q-201ENST00000408404 100 ntBASIC-0.81□□□□□ -2.54
SMCHD1A6NHR9 AC110620.1-201ENST00000416042 228 ntBASIC-0.81□□□□□ -2.54
SMCHD1A6NHR9 SNORD114-25-201ENST00000363742 72 ntBASIC-0.82□□□□□ -2.54
SMCHD1A6NHR9 MIR378F-201ENST00000578143 78 ntBASIC-0.82□□□□□ -2.54
SMCHD1A6NHR9 U2.18-201ENST00000622185 84 ntBASIC-0.82□□□□□ -2.54
SMCHD1A6NHR9 SNORD30.1-201ENST00000391309 70 ntBASIC-0.82□□□□□ -2.54
SMCHD1A6NHR9 RNA5SP266-201ENST00000410273 108 ntBASIC-0.82□□□□□ -2.54
SMCHD1A6NHR9 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.82□□□□□ -2.54
SMCHD1A6NHR9 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.82□□□□□ -2.54
SMCHD1A6NHR9 RNU6-540P-201ENST00000384622 101 ntBASIC-0.83□□□□□ -2.54
SMCHD1A6NHR9 Y_RNA.565-201ENST00000384719 101 ntBASIC-0.83□□□□□ -2.54
SMCHD1A6NHR9 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-0.83□□□□□ -2.54
SMCHD1A6NHR9 SNORD19-201ENST00000391191 68 ntBASIC-0.83□□□□□ -2.54
SMCHD1A6NHR9 MIR382-201ENST00000637119 76 ntBASIC-0.83□□□□□ -2.54
SMCHD1A6NHR9 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.86□□□□□ -2.55
SMCHD1A6NHR9 MIR3681-201ENST00000580089 72 ntBASIC-0.86□□□□□ -2.55
SMCHD1A6NHR9 MIR4306-201ENST00000583390 91 ntBASIC-0.86□□□□□ -2.55
SMCHD1A6NHR9 RNU6-520P-201ENST00000384717 104 ntBASIC-0.87□□□□□ -2.55
SMCHD1A6NHR9 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.87□□□□□ -2.55
SMCHD1A6NHR9 AC018880.2-201ENST00000414265 201 ntBASIC-0.88□□□□□ -2.55
SMCHD1A6NHR9 AC103706.3-201ENST00000636297 85 ntBASIC-0.88□□□□□ -2.55
SMCHD1A6NHR9 Y_RNA.139-201ENST00000363464 102 ntBASIC-0.89□□□□□ -2.55
SMCHD1A6NHR9 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.89□□□□□ -2.55
SMCHD1A6NHR9 SCARNA17-201ENST00000516183 144 ntBASIC-0.89□□□□□ -2.55
SMCHD1A6NHR9 MIR3170-201ENST00000582699 77 ntBASIC-0.89□□□□□ -2.55
SMCHD1A6NHR9 MIR6818-201ENST00000621576 65 ntBASIC-0.89□□□□□ -2.55
SMCHD1A6NHR9 RNU6-247P-201ENST00000362636 107 ntBASIC-0.91□□□□□ -2.55
SMCHD1A6NHR9 snoU83B.1-201ENST00000517136 88 ntBASIC-0.91□□□□□ -2.55
SMCHD1A6NHR9 MIR4499-201ENST00000584834 69 ntBASIC-0.91□□□□□ -2.55
SMCHD1A6NHR9 MIR29B1-201ENST00000385015 81 ntBASIC-0.93□□□□□ -2.56
SMCHD1A6NHR9 MIR7978-201ENST00000636158 59 ntBASIC-0.93□□□□□ -2.56
SMCHD1A6NHR9 Y_RNA.321-201ENST00000365149 102 ntBASIC-0.94□□□□□ -2.56
SMCHD1A6NHR9 SNORA40B-201ENST00000385573 128 ntBASIC-0.94□□□□□ -2.56
SMCHD1A6NHR9 RNU6-576P-201ENST00000390854 102 ntBASIC-0.94□□□□□ -2.56
SMCHD1A6NHR9 RNU6-10P-201ENST00000384036 107 ntBASIC-0.95□□□□□ -2.56
SMCHD1A6NHR9 SNORD116.2-201ENST00000391251 93 ntBASIC-0.96□□□□□ -2.56
SMCHD1A6NHR9 AC114801.3-201ENST00000510231 177 ntBASIC-0.96□□□□□ -2.56
SMCHD1A6NHR9 RNY1P9-201ENST00000532431 109 ntBASIC-0.96□□□□□ -2.56
SMCHD1A6NHR9 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.96□□□□□ -2.56
SMCHD1A6NHR9 RNA5SP67-201ENST00000516422 131 ntBASIC-0.96□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 214.3 ms