Protein–RNA interactions for Protein: Q9Y5X4

NR2E3, Photoreceptor-specific nuclear receptor, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR2E3Q9Y5X4 RNU6-663P-201ENST00000391105 106 ntBASIC-0.02□□□□□ -2.41
NR2E3Q9Y5X4 MTND4LP1-201ENST00000446263 157 ntBASIC-0.02□□□□□ -2.41
NR2E3Q9Y5X4 AC104692.1-201ENST00000472406 90 ntBASIC-0.02□□□□□ -2.41
NR2E3Q9Y5X4 RNU6-871P-201ENST00000516122 100 ntBASIC-0.02□□□□□ -2.41
NR2E3Q9Y5X4 RNU7-174P-201ENST00000516248 59 ntBASIC-0.02□□□□□ -2.41
NR2E3Q9Y5X4 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.02□□□□□ -2.41
NR2E3Q9Y5X4 RNU6-668P-201ENST00000364180 107 ntBASIC-0.03□□□□□ -2.41
NR2E3Q9Y5X4 MIR101-1-201ENST00000362265 75 ntBASIC-0.04□□□□□ -2.42
NR2E3Q9Y5X4 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.04□□□□□ -2.42
NR2E3Q9Y5X4 MIR519A2-201ENST00000384990 87 ntBASIC-0.04□□□□□ -2.42
NR2E3Q9Y5X4 MIR4645-201ENST00000583158 77 ntBASIC-0.04□□□□□ -2.42
NR2E3Q9Y5X4 MIR214-201ENST00000385214 110 ntBASIC-0.05□□□□□ -2.42
NR2E3Q9Y5X4 Y_RNA.443-201ENST00000384135 111 ntBASIC-0.06□□□□□ -2.42
NR2E3Q9Y5X4 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.06□□□□□ -2.42
NR2E3Q9Y5X4 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.06□□□□□ -2.42
NR2E3Q9Y5X4 MIR548AG1-201ENST00000579932 66 ntBASIC-0.06□□□□□ -2.42
NR2E3Q9Y5X4 RNA5SP215-201ENST00000363440 122 ntBASIC-0.07□□□□□ -2.42
NR2E3Q9Y5X4 RNU6-973P-201ENST00000364690 107 ntBASIC-0.07□□□□□ -2.42
NR2E3Q9Y5X4 SNORD56B-201ENST00000384713 71 ntBASIC-0.07□□□□□ -2.42
NR2E3Q9Y5X4 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.07□□□□□ -2.42
NR2E3Q9Y5X4 SNORD30.1-201ENST00000391309 70 ntBASIC-0.07□□□□□ -2.42
NR2E3Q9Y5X4 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.07□□□□□ -2.42
NR2E3Q9Y5X4 RNU6-518P-201ENST00000516056 96 ntBASIC-0.07□□□□□ -2.42
NR2E3Q9Y5X4 U6.111-201ENST00000636093 83 ntBASIC-0.07□□□□□ -2.42
NR2E3Q9Y5X4 SNORD49B-201ENST00000365172 72 ntBASIC-0.08□□□□□ -2.42
NR2E3Q9Y5X4 RNU6-649P-201ENST00000384463 107 ntBASIC-0.08□□□□□ -2.42
NR2E3Q9Y5X4 AC096531.1-201ENST00000419107 107 ntBASIC-0.08□□□□□ -2.42
NR2E3Q9Y5X4 AC114801.3-201ENST00000510231 177 ntBASIC-0.08□□□□□ -2.42
NR2E3Q9Y5X4 AC005520.4-201ENST00000604337 90 ntBASIC-0.08□□□□□ -2.42
NR2E3Q9Y5X4 U4.4-201ENST00000620626 117 ntBASIC-0.08□□□□□ -2.42
NR2E3Q9Y5X4 AL391099.1-201ENST00000624635 187 ntBASIC-0.08□□□□□ -2.42
NR2E3Q9Y5X4 MIR1295B-201ENST00000636144 60 ntBASIC-0.08□□□□□ -2.42
NR2E3Q9Y5X4 Y_RNA.386-201ENST00000383913 105 ntBASIC-0.09□□□□□ -2.42
NR2E3Q9Y5X4 RNU6-630P-201ENST00000391258 106 ntBASIC-0.09□□□□□ -2.42
NR2E3Q9Y5X4 AL021921.1-201ENST00000442774 93 ntBASIC-0.09□□□□□ -2.42
NR2E3Q9Y5X4 RPS29P8-201ENST00000445109 171 ntBASIC-0.09□□□□□ -2.42
NR2E3Q9Y5X4 RNA5SP470-201ENST00000516463 106 ntBASIC-0.09□□□□□ -2.42
NR2E3Q9Y5X4 RNU6-539P-201ENST00000516665 103 ntBASIC-0.09□□□□□ -2.42
NR2E3Q9Y5X4 MIR4432-201ENST00000581823 84 ntBASIC-0.09□□□□□ -2.42
NR2E3Q9Y5X4 AL590491.3-201ENST00000610731 82 ntBASIC-0.09□□□□□ -2.42
NR2E3Q9Y5X4 uc_338.36-201ENST00000622331 158 ntBASIC-0.09□□□□□ -2.42
NR2E3Q9Y5X4 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.1□□□□□ -2.43
NR2E3Q9Y5X4 RNU7-154P-201ENST00000516194 62 ntBASIC-0.1□□□□□ -2.43
NR2E3Q9Y5X4 MIR4464-201ENST00000580818 92 ntBASIC-0.1□□□□□ -2.43
NR2E3Q9Y5X4 AL353803.5-201ENST00000599815 141 ntBASIC-0.1□□□□□ -2.43
NR2E3Q9Y5X4 RNU6-698P-201ENST00000363523 107 ntBASIC-0.11□□□□□ -2.43
NR2E3Q9Y5X4 RNU6-34P-201ENST00000364874 107 ntBASIC-0.11□□□□□ -2.43
NR2E3Q9Y5X4 MIR548C-201ENST00000384815 97 ntBASIC-0.11□□□□□ -2.43
NR2E3Q9Y5X4 MIR517B-201ENST00000385102 67 ntBASIC-0.11□□□□□ -2.43
NR2E3Q9Y5X4 MIR548V-201ENST00000584165 80 ntBASIC-0.11□□□□□ -2.43
NR2E3Q9Y5X4 MIR4280-201ENST00000582178 76 ntBASIC-0.12□□□□□ -2.43
NR2E3Q9Y5X4 MIR5704-201ENST00000584029 77 ntBASIC-0.12□□□□□ -2.43
NR2E3Q9Y5X4 SNORA25.4-201ENST00000363666 124 ntBASIC-0.13□□□□□ -2.43
NR2E3Q9Y5X4 SNORD57-201ENST00000448188 72 ntBASIC-0.13□□□□□ -2.43
NR2E3Q9Y5X4 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.13□□□□□ -2.43
NR2E3Q9Y5X4 MIR8068-201ENST00000618032 68 ntBASIC-0.13□□□□□ -2.43
NR2E3Q9Y5X4 SNORA18.1-201ENST00000363418 128 ntBASIC-0.14□□□□□ -2.43
NR2E3Q9Y5X4 SNORD114-28-201ENST00000363610 72 ntBASIC-0.14□□□□□ -2.43
NR2E3Q9Y5X4 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.14□□□□□ -2.43
NR2E3Q9Y5X4 RNU6-800P-201ENST00000384473 103 ntBASIC-0.14□□□□□ -2.43
NR2E3Q9Y5X4 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.14□□□□□ -2.43
NR2E3Q9Y5X4 MIR630-201ENST00000384957 97 ntBASIC-0.14□□□□□ -2.43
NR2E3Q9Y5X4 MIR4723-201ENST00000585070 81 ntBASIC-0.14□□□□□ -2.43
NR2E3Q9Y5X4 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.15□□□□□ -2.43
NR2E3Q9Y5X4 SNORA32.1-201ENST00000364514 115 ntBASIC-0.15□□□□□ -2.43
NR2E3Q9Y5X4 RNA5SP451-201ENST00000410588 110 ntBASIC-0.15□□□□□ -2.43
NR2E3Q9Y5X4 AC114755.3-201ENST00000481111 251 ntBASIC-0.15□□□□□ -2.43
NR2E3Q9Y5X4 RNU6-542P-201ENST00000516405 103 ntBASIC-0.15□□□□□ -2.43
NR2E3Q9Y5X4 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.16□□□□□ -2.44
NR2E3Q9Y5X4 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.16□□□□□ -2.44
NR2E3Q9Y5X4 MIR6888-201ENST00000621977 67 ntBASIC-0.16□□□□□ -2.44
NR2E3Q9Y5X4 SNORD114-12-201ENST00000365400 75 ntBASIC-0.17□□□□□ -2.44
NR2E3Q9Y5X4 MIR224-201ENST00000384889 81 ntBASIC-0.17□□□□□ -2.44
NR2E3Q9Y5X4 snoR1.1-201ENST00000628177 80 ntBASIC-0.17□□□□□ -2.44
NR2E3Q9Y5X4 MIR1468-201ENST00000410600 86 ntBASIC-0.18□□□□□ -2.44
NR2E3Q9Y5X4 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.19□□□□□ -2.44
NR2E3Q9Y5X4 SNORD4A-201ENST00000459174 72 ntBASIC-0.19□□□□□ -2.44
NR2E3Q9Y5X4 AC139453.2-201ENST00000487255 133 ntBASIC-0.19□□□□□ -2.44
NR2E3Q9Y5X4 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.19□□□□□ -2.44
NR2E3Q9Y5X4 MIR4511-201ENST00000582784 87 ntBASIC-0.19□□□□□ -2.44
NR2E3Q9Y5X4 AL445584.3-201ENST00000617173 78 ntBASIC-0.19□□□□□ -2.44
NR2E3Q9Y5X4 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.2□□□□□ -2.44
NR2E3Q9Y5X4 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-0.2□□□□□ -2.44
NR2E3Q9Y5X4 MIR3666-201ENST00000607845 111 ntBASIC-0.2□□□□□ -2.44
NR2E3Q9Y5X4 MIR6854-201ENST00000614935 69 ntBASIC-0.2□□□□□ -2.44
NR2E3Q9Y5X4 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.21□□□□□ -2.44
NR2E3Q9Y5X4 SNORD113-2-201ENST00000391082 72 ntBASIC-0.21□□□□□ -2.44
NR2E3Q9Y5X4 SNX3P1X-201ENST00000414887 175 ntBASIC-0.21□□□□□ -2.44
NR2E3Q9Y5X4 SNORA62.4-201ENST00000365504 151 ntBASIC-0.22□□□□□ -2.44
NR2E3Q9Y5X4 RNU6-901P-201ENST00000384593 106 ntBASIC-0.22□□□□□ -2.44
NR2E3Q9Y5X4 AL445193.1-201ENST00000441183 141 ntBASIC-0.22□□□□□ -2.44
NR2E3Q9Y5X4 MIR8064-201ENST00000612863 90 ntBASIC-0.22□□□□□ -2.44
NR2E3Q9Y5X4 MIR6851-201ENST00000617060 67 ntBASIC-0.22□□□□□ -2.44
NR2E3Q9Y5X4 RNU6-246P-201ENST00000384702 107 ntBASIC-0.23□□□□□ -2.45
NR2E3Q9Y5X4 SNORA41B-201ENST00000384785 128 ntBASIC-0.23□□□□□ -2.45
NR2E3Q9Y5X4 RNA5SP300-201ENST00000391197 107 ntBASIC-0.23□□□□□ -2.45
NR2E3Q9Y5X4 RNA5SP66-201ENST00000517178 101 ntBASIC-0.23□□□□□ -2.45
NR2E3Q9Y5X4 SNORD38.3-201ENST00000516599 73 ntBASIC-0.24□□□□□ -2.45
NR2E3Q9Y5X4 AC103706.3-201ENST00000636297 85 ntBASIC-0.24□□□□□ -2.45
NR2E3Q9Y5X4 RNU6-471P-201ENST00000383944 106 ntBASIC-0.25□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 178.2 ms