Protein–RNA interactions for Protein: Q9Y566

SHANK1, SH3 and multiple ankyrin repeat domains protein 1, humanhuman

Predictions only

Length 2,161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1Q9Y566 AC090617.8-201ENST00000623339 167 ntBASIC-0.53□□□□□ -2.49
SHANK1Q9Y566 RNU6-226P-201ENST00000363778 107 ntBASIC-0.53□□□□□ -2.49
SHANK1Q9Y566 RNY4P18-201ENST00000391107 89 ntBASIC-0.53□□□□□ -2.49
SHANK1Q9Y566 AL445584.3-201ENST00000617173 78 ntBASIC-0.53□□□□□ -2.49
SHANK1Q9Y566 SNORA62.4-201ENST00000365504 151 ntBASIC-0.54□□□□□ -2.5
SHANK1Q9Y566 Y_RNA.607-201ENST00000410597 98 ntBASIC-0.54□□□□□ -2.5
SHANK1Q9Y566 CYP3A54P-201ENST00000566950 75 ntBASIC-0.54□□□□□ -2.5
SHANK1Q9Y566 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.54□□□□□ -2.5
SHANK1Q9Y566 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.55□□□□□ -2.5
SHANK1Q9Y566 SNORD20-201ENST00000384550 80 ntBASIC-0.55□□□□□ -2.5
SHANK1Q9Y566 RNU7-153P-201ENST00000516455 62 ntBASIC-0.55□□□□□ -2.5
SHANK1Q9Y566 Y_RNA.313-201ENST00000365095 103 ntBASIC-0.55□□□□□ -2.5
SHANK1Q9Y566 MIR527-201ENST00000385244 85 ntBASIC-0.55□□□□□ -2.5
SHANK1Q9Y566 RNU7-88P-201ENST00000458752 63 ntBASIC-0.55□□□□□ -2.5
SHANK1Q9Y566 MIR5591-201ENST00000578248 65 ntBASIC-0.55□□□□□ -2.5
SHANK1Q9Y566 U6.81-201ENST00000612550 106 ntBASIC-0.55□□□□□ -2.5
SHANK1Q9Y566 uc_338.19-201ENST00000616808 99 ntBASIC-0.55□□□□□ -2.5
SHANK1Q9Y566 SCARNA18B-201ENST00000458806 135 ntBASIC-0.56□□□□□ -2.5
SHANK1Q9Y566 RNA5SP470-201ENST00000516463 106 ntBASIC-0.56□□□□□ -2.5
SHANK1Q9Y566 SNORD74.6-201ENST00000364796 70 ntBASIC-0.56□□□□□ -2.5
SHANK1Q9Y566 MIR124-2-201ENST00000385081 109 ntBASIC-0.56□□□□□ -2.5
SHANK1Q9Y566 AL603908.1-201ENST00000406098 201 ntBASIC-0.56□□□□□ -2.5
SHANK1Q9Y566 RNU6-164P-201ENST00000364604 103 ntBASIC-0.57□□□□□ -2.5
SHANK1Q9Y566 RNU6-147P-201ENST00000383983 107 ntBASIC-0.57□□□□□ -2.5
SHANK1Q9Y566 MIR519A2-201ENST00000384990 87 ntBASIC-0.57□□□□□ -2.5
SHANK1Q9Y566 SNORA26.4-201ENST00000391188 123 ntBASIC-0.57□□□□□ -2.5
SHANK1Q9Y566 AL500527.2-201ENST00000454105 95 ntBASIC-0.57□□□□□ -2.5
SHANK1Q9Y566 MIR3675-201ENST00000583661 73 ntBASIC-0.57□□□□□ -2.5
SHANK1Q9Y566 MIR6502-201ENST00000617296 76 ntBASIC-0.57□□□□□ -2.5
SHANK1Q9Y566 RNU6-675P-201ENST00000384236 104 ntBASIC-0.57□□□□□ -2.5
SHANK1Q9Y566 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.57□□□□□ -2.5
SHANK1Q9Y566 AL021921.1-201ENST00000442774 93 ntBASIC-0.57□□□□□ -2.5
SHANK1Q9Y566 RNU6-844P-201ENST00000517175 102 ntBASIC-0.57□□□□□ -2.5
SHANK1Q9Y566 AP002795.1-201ENST00000534879 84 ntBASIC-0.57□□□□□ -2.5
SHANK1Q9Y566 MIR1297-201ENST00000637311 77 ntBASIC-0.57□□□□□ -2.5
SHANK1Q9Y566 SNORD114-17-201ENST00000364699 75 ntBASIC-0.58□□□□□ -2.5
SHANK1Q9Y566 RNU6-979P-201ENST00000383896 107 ntBASIC-0.58□□□□□ -2.5
SHANK1Q9Y566 MIR147A-201ENST00000385079 72 ntBASIC-0.58□□□□□ -2.5
SHANK1Q9Y566 Y_RNA.620-201ENST00000411009 88 ntBASIC-0.58□□□□□ -2.5
SHANK1Q9Y566 RNA5SP93-201ENST00000362525 114 ntBASIC-0.59□□□□□ -2.5
SHANK1Q9Y566 Y_RNA.261-201ENST00000364631 102 ntBASIC-0.59□□□□□ -2.5
SHANK1Q9Y566 AC018880.2-201ENST00000414265 201 ntBASIC-0.59□□□□□ -2.5
SHANK1Q9Y566 RNU6-109P-201ENST00000516364 107 ntBASIC-0.59□□□□□ -2.5
SHANK1Q9Y566 RNU6-184P-201ENST00000516514 107 ntBASIC-0.59□□□□□ -2.5
SHANK1Q9Y566 RNU6-557P-201ENST00000516842 110 ntBASIC-0.59□□□□□ -2.5
SHANK1Q9Y566 MALAT1.1-201ENST00000618249 95 ntBASIC-0.59□□□□□ -2.5
SHANK1Q9Y566 U6.96-201ENST00000636425 70 ntBASIC-0.59□□□□□ -2.5
SHANK1Q9Y566 RNU6-497P-201ENST00000365316 104 ntBASIC-0.59□□□□□ -2.5
SHANK1Q9Y566 Y_RNA.442-201ENST00000384131 102 ntBASIC-0.59□□□□□ -2.5
SHANK1Q9Y566 RNU6-313P-201ENST00000516317 112 ntBASIC-0.59□□□□□ -2.5
SHANK1Q9Y566 MIR664B-201ENST00000626756 61 ntBASIC-0.59□□□□□ -2.5
SHANK1Q9Y566 RNU4-61P-201ENST00000411243 107 ntBASIC-0.6□□□□□ -2.51
SHANK1Q9Y566 MIR1246-201ENST00000636535 73 ntBASIC-0.6□□□□□ -2.51
SHANK1Q9Y566 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.6□□□□□ -2.51
SHANK1Q9Y566 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.6□□□□□ -2.51
SHANK1Q9Y566 RNY4-201ENST00000516507 96 ntBASIC-0.6□□□□□ -2.51
SHANK1Q9Y566 Y_RNA.340-201ENST00000365330 92 ntBASIC-0.61□□□□□ -2.51
SHANK1Q9Y566 RNY4P30-201ENST00000410216 95 ntBASIC-0.61□□□□□ -2.51
SHANK1Q9Y566 AL450471.1-201ENST00000447509 127 ntBASIC-0.61□□□□□ -2.51
SHANK1Q9Y566 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.61□□□□□ -2.51
SHANK1Q9Y566 MIR4770-201ENST00000579149 58 ntBASIC-0.61□□□□□ -2.51
SHANK1Q9Y566 RNU6-755P-201ENST00000364400 103 ntBASIC-0.62□□□□□ -2.51
SHANK1Q9Y566 SNORD54-201ENST00000459159 67 ntBASIC-0.62□□□□□ -2.51
SHANK1Q9Y566 RNU6-807P-201ENST00000516805 107 ntBASIC-0.62□□□□□ -2.51
SHANK1Q9Y566 AC120024.2-201ENST00000576526 175 ntBASIC-0.62□□□□□ -2.51
SHANK1Q9Y566 MIR548AI-201ENST00000579940 88 ntBASIC-0.62□□□□□ -2.51
SHANK1Q9Y566 SNORD115-33-201ENST00000363723 82 ntBASIC-0.63□□□□□ -2.51
SHANK1Q9Y566 Y_RNA.284-201ENST00000364806 102 ntBASIC-0.63□□□□□ -2.51
SHANK1Q9Y566 RNU6-656P-201ENST00000516785 107 ntBASIC-0.63□□□□□ -2.51
SHANK1Q9Y566 SNORD19B.1-201ENST00000630615 80 ntBASIC-0.63□□□□□ -2.51
SHANK1Q9Y566 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.63□□□□□ -2.51
SHANK1Q9Y566 SNORD115-22-201ENST00000364456 82 ntBASIC-0.63□□□□□ -2.51
SHANK1Q9Y566 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.63□□□□□ -2.51
SHANK1Q9Y566 RNU6-924P-201ENST00000362926 108 ntBASIC-0.64□□□□□ -2.51
SHANK1Q9Y566 RNU6-640P-201ENST00000363693 105 ntBASIC-0.64□□□□□ -2.51
SHANK1Q9Y566 Y_RNA.232-201ENST00000364369 96 ntBASIC-0.64□□□□□ -2.51
SHANK1Q9Y566 RNU6-686P-201ENST00000364839 107 ntBASIC-0.64□□□□□ -2.51
SHANK1Q9Y566 RNU6-32P-201ENST00000383948 107 ntBASIC-0.64□□□□□ -2.51
SHANK1Q9Y566 RNU6-13P-201ENST00000384248 107 ntBASIC-0.64□□□□□ -2.51
SHANK1Q9Y566 RNU6-12P-201ENST00000384604 107 ntBASIC-0.64□□□□□ -2.51
SHANK1Q9Y566 RNU6-41P-201ENST00000384741 107 ntBASIC-0.64□□□□□ -2.51
SHANK1Q9Y566 SNORD90-201ENST00000391145 111 ntBASIC-0.64□□□□□ -2.51
SHANK1Q9Y566 MIR8485-201ENST00000401372 91 ntBASIC-0.64□□□□□ -2.51
SHANK1Q9Y566 AC093729.1-201ENST00000513074 128 ntBASIC-0.64□□□□□ -2.51
SHANK1Q9Y566 MIR6888-201ENST00000621977 67 ntBASIC-0.64□□□□□ -2.51
SHANK1Q9Y566 MIRLET7A1-201ENST00000362295 80 ntBASIC-0.64□□□□□ -2.51
SHANK1Q9Y566 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-0.64□□□□□ -2.51
SHANK1Q9Y566 Y_RNA.611-201ENST00000410682 108 ntBASIC-0.64□□□□□ -2.51
SHANK1Q9Y566 MTND4LP1-201ENST00000446263 157 ntBASIC-0.64□□□□□ -2.51
SHANK1Q9Y566 SNORD63.1-201ENST00000516178 80 ntBASIC-0.64□□□□□ -2.51
SHANK1Q9Y566 Y_RNA.175-201ENST00000363794 111 ntBASIC-0.65□□□□□ -2.51
SHANK1Q9Y566 AC074348.1-201ENST00000426503 132 ntBASIC-0.65□□□□□ -2.51
SHANK1Q9Y566 RNU6-732P-201ENST00000516033 103 ntBASIC-0.65□□□□□ -2.51
SHANK1Q9Y566 Y_RNA.502-201ENST00000384478 113 ntBASIC-0.66□□□□□ -2.51
SHANK1Q9Y566 Y_RNA.564-201ENST00000384708 106 ntBASIC-0.66□□□□□ -2.51
SHANK1Q9Y566 RNU6-983P-201ENST00000516004 103 ntBASIC-0.66□□□□□ -2.51
SHANK1Q9Y566 MIR4490-201ENST00000582647 84 ntBASIC-0.66□□□□□ -2.51
SHANK1Q9Y566 Y_RNA.223-201ENST00000364290 113 ntBASIC-0.66□□□□□ -2.52
SHANK1Q9Y566 RNU7-174P-201ENST00000516248 59 ntBASIC-0.66□□□□□ -2.52
SHANK1Q9Y566 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.66□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms