Protein–RNA interactions for Protein: Q9NZ43

USE1, Vesicle transport protein USE1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USE1Q9NZ43 AC062037.2-201ENST00000610137 73 ntBASIC-3.39□□□□□ -2.95
USE1Q9NZ43 RNU6-247P-201ENST00000362636 107 ntBASIC-3.4□□□□□ -2.95
USE1Q9NZ43 Y_RNA.96-201ENST00000363092 109 ntBASIC-3.4□□□□□ -2.95
USE1Q9NZ43 MIR548AA1-201ENST00000384971 97 ntBASIC-3.4□□□□□ -2.95
USE1Q9NZ43 AC044792.1-201ENST00000593294 196 ntBASIC-3.4□□□□□ -2.95
USE1Q9NZ43 Y_RNA.257-201ENST00000364596 102 ntBASIC-3.41□□□□□ -2.96
USE1Q9NZ43 MIR569-201ENST00000385228 96 ntBASIC-3.41□□□□□ -2.96
USE1Q9NZ43 SNORD77.2-201ENST00000391045 68 ntBASIC-3.41□□□□□ -2.96
USE1Q9NZ43 SCARNA23-201ENST00000516060 130 ntBASIC-3.41□□□□□ -2.96
USE1Q9NZ43 RNU6-537P-201ENST00000517277 103 ntBASIC-3.41□□□□□ -2.96
USE1Q9NZ43 U6.97-201ENST00000636904 101 ntBASIC-3.41□□□□□ -2.96
USE1Q9NZ43 RNU6-1306P-201ENST00000365219 99 ntBASIC-3.44□□□□□ -2.96
USE1Q9NZ43 RNU7-120P-201ENST00000459334 63 ntBASIC-3.45□□□□□ -2.96
USE1Q9NZ43 AC005520.4-201ENST00000604337 90 ntBASIC-3.45□□□□□ -2.96
USE1Q9NZ43 SNORA27.2-201ENST00000363365 126 ntBASIC-3.46□□□□□ -2.96
USE1Q9NZ43 RNU6-1160P-201ENST00000384546 104 ntBASIC-3.46□□□□□ -2.96
USE1Q9NZ43 AC097484.2-201ENST00000509147 251 ntBASIC-3.46□□□□□ -2.96
USE1Q9NZ43 Y_RNA.400-201ENST00000383963 111 ntBASIC-3.47□□□□□ -2.96
USE1Q9NZ43 RNY4-201ENST00000516507 96 ntBASIC-3.48□□□□□ -2.97
USE1Q9NZ43 AC008737.2-201ENST00000599446 118 ntBASIC-3.48□□□□□ -2.97
USE1Q9NZ43 RNY4P9-201ENST00000363194 97 ntBASIC-3.49□□□□□ -2.97
USE1Q9NZ43 RNU6-698P-201ENST00000363523 107 ntBASIC-3.49□□□□□ -2.97
USE1Q9NZ43 Y_RNA.264-201ENST00000364665 102 ntBASIC-3.49□□□□□ -2.97
USE1Q9NZ43 RNU6-34P-201ENST00000364874 107 ntBASIC-3.49□□□□□ -2.97
USE1Q9NZ43 RNU6-1094P-201ENST00000362416 104 ntBASIC-3.5□□□□□ -2.97
USE1Q9NZ43 Y_RNA.525-201ENST00000384570 113 ntBASIC-3.5□□□□□ -2.97
USE1Q9NZ43 MIR1302-3-201ENST00000408128 138 ntBASIC-3.5□□□□□ -2.97
USE1Q9NZ43 RNU6-394P-201ENST00000410735 107 ntBASIC-3.5□□□□□ -2.97
USE1Q9NZ43 U4.4-201ENST00000620626 117 ntBASIC-3.5□□□□□ -2.97
USE1Q9NZ43 Y_RNA.61-201ENST00000362835 102 ntBASIC-3.51□□□□□ -2.97
USE1Q9NZ43 RNU6-1081P-201ENST00000384537 107 ntBASIC-3.51□□□□□ -2.97
USE1Q9NZ43 RNU6-904P-201ENST00000516206 101 ntBASIC-3.51□□□□□ -2.97
USE1Q9NZ43 RNU6-1108P-201ENST00000516308 104 ntBASIC-3.51□□□□□ -2.97
USE1Q9NZ43 SNORD18C-201ENST00000362704 69 ntBASIC-3.52□□□□□ -2.97
USE1Q9NZ43 Y_RNA.8-201ENST00000362353 102 ntBASIC-3.53□□□□□ -2.97
USE1Q9NZ43 RNU6-574P-201ENST00000384265 107 ntBASIC-3.53□□□□□ -2.97
USE1Q9NZ43 Y_RNA.647-201ENST00000459194 112 ntBASIC-3.53□□□□□ -2.97
USE1Q9NZ43 Y_RNA.640-201ENST00000459296 112 ntBASIC-3.53□□□□□ -2.97
USE1Q9NZ43 Y_RNA.803-201ENST00000614432 112 ntBASIC-3.53□□□□□ -2.97
USE1Q9NZ43 Y_RNA.815-201ENST00000616655 112 ntBASIC-3.53□□□□□ -2.97
USE1Q9NZ43 Y_RNA.795-201ENST00000619475 112 ntBASIC-3.53□□□□□ -2.97
USE1Q9NZ43 Y_RNA.827-201ENST00000638104 112 ntBASIC-3.53□□□□□ -2.97
USE1Q9NZ43 Y_RNA.307-201ENST00000365022 117 ntBASIC-3.54□□□□□ -2.98
USE1Q9NZ43 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-3.54□□□□□ -2.98
USE1Q9NZ43 MTCYBP9-201ENST00000431021 303 ntBASIC-3.54□□□□□ -2.98
USE1Q9NZ43 MIR4801-201ENST00000582704 82 ntBASIC-3.54□□□□□ -2.98
USE1Q9NZ43 RNU6-804P-201ENST00000384286 107 ntBASIC-3.55□□□□□ -2.98
USE1Q9NZ43 MTND4LP9-201ENST00000427694 174 ntBASIC-3.55□□□□□ -2.98
USE1Q9NZ43 RNU7-107P-201ENST00000459121 61 ntBASIC-3.55□□□□□ -2.98
USE1Q9NZ43 RNU7-61P-201ENST00000515897 61 ntBASIC-3.55□□□□□ -2.98
USE1Q9NZ43 RNU6-426P-201ENST00000516464 97 ntBASIC-3.55□□□□□ -2.98
USE1Q9NZ43 MIR548V-201ENST00000584165 80 ntBASIC-3.56□□□□□ -2.98
USE1Q9NZ43 RNU6-995P-201ENST00000391244 107 ntBASIC-3.57□□□□□ -2.98
USE1Q9NZ43 SNORD33.1-201ENST00000516213 88 ntBASIC-3.57□□□□□ -2.98
USE1Q9NZ43 MTRNR2L9-201ENST00000622562 75 ntBASIC-3.57□□□□□ -2.98
USE1Q9NZ43 Y_RNA.398-201ENST00000383952 99 ntBASIC-3.58□□□□□ -2.98
USE1Q9NZ43 MIR519C-201ENST00000385053 87 ntBASIC-3.58□□□□□ -2.98
USE1Q9NZ43 RNY3P8-201ENST00000411366 126 ntBASIC-3.58□□□□□ -2.98
USE1Q9NZ43 SNORD63.2-201ENST00000516303 64 ntBASIC-3.58□□□□□ -2.98
USE1Q9NZ43 Y_RNA.281-201ENST00000364774 94 ntBASIC-3.59□□□□□ -2.98
USE1Q9NZ43 SNORD116-16-201ENST00000384533 92 ntBASIC-3.59□□□□□ -2.98
USE1Q9NZ43 MIR606-201ENST00000384851 96 ntBASIC-3.59□□□□□ -2.98
USE1Q9NZ43 MIR568-201ENST00000385036 95 ntBASIC-3.59□□□□□ -2.98
USE1Q9NZ43 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-3.59□□□□□ -2.98
USE1Q9NZ43 RNU6-669P-201ENST00000365575 107 ntBASIC-3.6□□□□□ -2.99
USE1Q9NZ43 RNU6-982P-201ENST00000516216 102 ntBASIC-3.6□□□□□ -2.99
USE1Q9NZ43 RNU6-162P-201ENST00000516228 103 ntBASIC-3.6□□□□□ -2.99
USE1Q9NZ43 MIR3675-201ENST00000583661 73 ntBASIC-3.6□□□□□ -2.99
USE1Q9NZ43 MIR3914-2-201ENST00000637339 95 ntBASIC-3.6□□□□□ -2.99
USE1Q9NZ43 RNU6-604P-201ENST00000390917 100 ntBASIC-3.61□□□□□ -2.99
USE1Q9NZ43 RNU6-1191P-201ENST00000516799 107 ntBASIC-3.61□□□□□ -2.99
USE1Q9NZ43 SNORD113-2-201ENST00000391082 72 ntBASIC-3.62□□□□□ -2.99
USE1Q9NZ43 RNU6-330P-201ENST00000363015 107 ntBASIC-3.63□□□□□ -2.99
USE1Q9NZ43 RNU7-151P-201ENST00000516930 53 ntBASIC-3.63□□□□□ -2.99
USE1Q9NZ43 Y_RNA.349-201ENST00000365406 102 ntBASIC-3.64□□□□□ -2.99
USE1Q9NZ43 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-3.64□□□□□ -2.99
USE1Q9NZ43 RNU6-1211P-201ENST00000459179 105 ntBASIC-3.64□□□□□ -2.99
USE1Q9NZ43 SNORD1B-201ENST00000363091 84 ntBASIC-3.65□□□□□ -2.99
USE1Q9NZ43 RNY1P1-201ENST00000364372 112 ntBASIC-3.65□□□□□ -2.99
USE1Q9NZ43 Y_RNA.291-201ENST00000364886 113 ntBASIC-3.65□□□□□ -2.99
USE1Q9NZ43 Y_RNA.513-201ENST00000384522 100 ntBASIC-3.65□□□□□ -2.99
USE1Q9NZ43 Y_RNA.586-201ENST00000391146 98 ntBASIC-3.65□□□□□ -2.99
USE1Q9NZ43 RNU6-1107P-201ENST00000364817 104 ntBASIC-3.66□□□□□ -3
USE1Q9NZ43 MIR630-201ENST00000384957 97 ntBASIC-3.66□□□□□ -3
USE1Q9NZ43 U7.3-201ENST00000616123 62 ntBASIC-3.66□□□□□ -3
USE1Q9NZ43 SNORD115-37-201ENST00000363768 82 ntBASIC-3.67□□□□□ -3
USE1Q9NZ43 SNORA8.1-201ENST00000384250 140 ntBASIC-3.67□□□□□ -3
USE1Q9NZ43 MIR581-201ENST00000384895 96 ntBASIC-3.67□□□□□ -3
USE1Q9NZ43 SNORA40-201ENST00000388090 126 ntBASIC-3.67□□□□□ -3
USE1Q9NZ43 RNU6-523P-201ENST00000516304 54 ntBASIC-3.67□□□□□ -3
USE1Q9NZ43 U6.95-201ENST00000636931 70 ntBASIC-3.67□□□□□ -3
USE1Q9NZ43 Y_RNA.186-201ENST00000363899 92 ntBASIC-3.68□□□□□ -3
USE1Q9NZ43 Y_RNA.519-201ENST00000384553 102 ntBASIC-3.68□□□□□ -3
USE1Q9NZ43 RNU6-141P-201ENST00000410499 105 ntBASIC-3.68□□□□□ -3
USE1Q9NZ43 SNORD45.1-201ENST00000363181 77 ntBASIC-3.69□□□□□ -3
USE1Q9NZ43 Y_RNA.107-201ENST00000363190 121 ntBASIC-3.7□□□□□ -3
USE1Q9NZ43 Y_RNA.712-201ENST00000517011 92 ntBASIC-3.7□□□□□ -3
USE1Q9NZ43 SNX3P1Y-201ENST00000615757 176 ntBASIC-3.7□□□□□ -3
USE1Q9NZ43 Y_RNA.313-201ENST00000365095 103 ntBASIC-3.71□□□□□ -3
USE1Q9NZ43 Y_RNA.321-201ENST00000365149 102 ntBASIC-3.71□□□□□ -3
Retrieved 100 of 98,524 protein–RNA pairs in 276 ms