Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.97□□□□□ -2.56
SMC4Q9NTJ3 RNU6-303P-201ENST00000517091 106 ntBASIC-0.97□□□□□ -2.56
SMC4Q9NTJ3 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.98□□□□□ -2.57
SMC4Q9NTJ3 SNX3P1X-201ENST00000414887 175 ntBASIC-0.98□□□□□ -2.57
SMC4Q9NTJ3 AC074348.1-201ENST00000426503 132 ntBASIC-0.98□□□□□ -2.57
SMC4Q9NTJ3 MIR3675-201ENST00000583661 73 ntBASIC-0.99□□□□□ -2.57
SMC4Q9NTJ3 RNU6-1246P-201ENST00000391064 107 ntBASIC-1□□□□□ -2.57
SMC4Q9NTJ3 RNU6-518P-201ENST00000516056 96 ntBASIC-1□□□□□ -2.57
SMC4Q9NTJ3 IGLL4P-201ENST00000614590 133 ntBASIC-1□□□□□ -2.57
SMC4Q9NTJ3 RNU6-645P-201ENST00000364649 106 ntBASIC-1.01□□□□□ -2.57
SMC4Q9NTJ3 MIR548AG1-201ENST00000579932 66 ntBASIC-1.01□□□□□ -2.57
SMC4Q9NTJ3 MIR4484-201ENST00000582855 83 ntBASIC-1.01□□□□□ -2.57
SMC4Q9NTJ3 RNY1P1-201ENST00000364372 112 ntBASIC-1.02□□□□□ -2.57
SMC4Q9NTJ3 SNORA8.1-201ENST00000384250 140 ntBASIC-1.03□□□□□ -2.57
SMC4Q9NTJ3 MIR587-201ENST00000384845 96 ntBASIC-1.03□□□□□ -2.57
SMC4Q9NTJ3 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.03□□□□□ -2.57
SMC4Q9NTJ3 MIR5588-201ENST00000581890 63 ntBASIC-1.03□□□□□ -2.57
SMC4Q9NTJ3 U2.7-201ENST00000619197 100 ntBASIC-1.03□□□□□ -2.57
SMC4Q9NTJ3 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.03□□□□□ -2.57
SMC4Q9NTJ3 SNORD83B-201ENST00000386745 93 ntBASIC-1.04□□□□□ -2.58
SMC4Q9NTJ3 SCARNA17-201ENST00000516183 144 ntBASIC-1.04□□□□□ -2.58
SMC4Q9NTJ3 MIR6738-201ENST00000619620 64 ntBASIC-1.04□□□□□ -2.58
SMC4Q9NTJ3 RNU6-979P-201ENST00000383896 107 ntBASIC-1.05□□□□□ -2.58
SMC4Q9NTJ3 Y_RNA.607-201ENST00000410597 98 ntBASIC-1.05□□□□□ -2.58
SMC4Q9NTJ3 RNU7-154P-201ENST00000516194 62 ntBASIC-1.05□□□□□ -2.58
SMC4Q9NTJ3 MIR4324-201ENST00000584846 72 ntBASIC-1.05□□□□□ -2.58
SMC4Q9NTJ3 RNU6-10P-201ENST00000384036 107 ntBASIC-1.06□□□□□ -2.58
SMC4Q9NTJ3 RNU6-604P-201ENST00000390917 100 ntBASIC-1.06□□□□□ -2.58
SMC4Q9NTJ3 RNU6-982P-201ENST00000516216 102 ntBASIC-1.06□□□□□ -2.58
SMC4Q9NTJ3 SNORD45.1-201ENST00000363181 77 ntBASIC-1.07□□□□□ -2.58
SMC4Q9NTJ3 SNORD114-17-201ENST00000364699 75 ntBASIC-1.07□□□□□ -2.58
SMC4Q9NTJ3 MIR1468-201ENST00000410600 86 ntBASIC-1.07□□□□□ -2.58
SMC4Q9NTJ3 AL021921.1-201ENST00000442774 93 ntBASIC-1.08□□□□□ -2.58
SMC4Q9NTJ3 Y_RNA.316-201ENST00000365118 111 ntBASIC-1.09□□□□□ -2.58
SMC4Q9NTJ3 RNU6-431P-201ENST00000383874 107 ntBASIC-1.09□□□□□ -2.58
SMC4Q9NTJ3 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.09□□□□□ -2.58
SMC4Q9NTJ3 MIR4499-201ENST00000584834 69 ntBASIC-1.09□□□□□ -2.58
SMC4Q9NTJ3 uc_338.19-201ENST00000616808 99 ntBASIC-1.09□□□□□ -2.58
SMC4Q9NTJ3 Y_RNA.81-201ENST00000362997 102 ntBASIC-1.1□□□□□ -2.59
SMC4Q9NTJ3 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.1□□□□□ -2.59
SMC4Q9NTJ3 SNORD64-201ENST00000386683 67 ntBASIC-1.1□□□□□ -2.59
SMC4Q9NTJ3 MIR664A-201ENST00000626086 82 ntBASIC-1.1□□□□□ -2.59
SMC4Q9NTJ3 MIR494-201ENST00000349529 81 ntBASIC-1.11□□□□□ -2.59
SMC4Q9NTJ3 MIR548C-201ENST00000384815 97 ntBASIC-1.11□□□□□ -2.59
SMC4Q9NTJ3 MIR4320-201ENST00000636981 65 ntBASIC-1.11□□□□□ -2.59
SMC4Q9NTJ3 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.13□□□□□ -2.59
SMC4Q9NTJ3 RNU6-924P-201ENST00000362926 108 ntBASIC-1.14□□□□□ -2.59
SMC4Q9NTJ3 RNU7-171P-201ENST00000459581 62 ntBASIC-1.14□□□□□ -2.59
SMC4Q9NTJ3 MIR1297-201ENST00000637311 77 ntBASIC-1.14□□□□□ -2.59
SMC4Q9NTJ3 RNU6-315P-201ENST00000362666 107 ntBASIC-1.15□□□□□ -2.59
SMC4Q9NTJ3 SNORD115-22-201ENST00000364456 82 ntBASIC-1.15□□□□□ -2.59
SMC4Q9NTJ3 RNU6-294P-201ENST00000364999 102 ntBASIC-1.15□□□□□ -2.59
SMC4Q9NTJ3 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.15□□□□□ -2.59
SMC4Q9NTJ3 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-1.15□□□□□ -2.59
SMC4Q9NTJ3 Y_RNA.694-201ENST00000516677 117 ntBASIC-1.15□□□□□ -2.59
SMC4Q9NTJ3 RNU6-807P-201ENST00000516805 107 ntBASIC-1.15□□□□□ -2.59
SMC4Q9NTJ3 MIR5582-201ENST00000579697 68 ntBASIC-1.15□□□□□ -2.59
SMC4Q9NTJ3 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.15□□□□□ -2.59
SMC4Q9NTJ3 MIR147A-201ENST00000385079 72 ntBASIC-1.16□□□□□ -2.6
SMC4Q9NTJ3 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.17□□□□□ -2.6
SMC4Q9NTJ3 SCARNA18B-201ENST00000458806 135 ntBASIC-1.17□□□□□ -2.6
SMC4Q9NTJ3 RNU7-174P-201ENST00000516248 59 ntBASIC-1.17□□□□□ -2.6
SMC4Q9NTJ3 RNU6-246P-201ENST00000384702 107 ntBASIC-1.18□□□□□ -2.6
SMC4Q9NTJ3 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.18□□□□□ -2.6
SMC4Q9NTJ3 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.18□□□□□ -2.6
SMC4Q9NTJ3 MIR4723-201ENST00000585070 81 ntBASIC-1.18□□□□□ -2.6
SMC4Q9NTJ3 MIR382-201ENST00000637119 76 ntBASIC-1.18□□□□□ -2.6
SMC4Q9NTJ3 MIR198-201ENST00000637333 62 ntBASIC-1.18□□□□□ -2.6
SMC4Q9NTJ3 MIR450A2-201ENST00000385022 100 ntBASIC-1.19□□□□□ -2.6
SMC4Q9NTJ3 RNU6-380P-201ENST00000410207 107 ntBASIC-1.2□□□□□ -2.6
SMC4Q9NTJ3 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.2□□□□□ -2.6
SMC4Q9NTJ3 MIR378F-201ENST00000578143 78 ntBASIC-1.2□□□□□ -2.6
SMC4Q9NTJ3 MIR4712-201ENST00000583750 82 ntBASIC-1.2□□□□□ -2.6
SMC4Q9NTJ3 RNU7-88P-201ENST00000458752 63 ntBASIC-1.21□□□□□ -2.6
SMC4Q9NTJ3 SNORD63.1-201ENST00000516178 80 ntBASIC-1.21□□□□□ -2.6
SMC4Q9NTJ3 MIR1245B-201ENST00000636115 69 ntBASIC-1.21□□□□□ -2.6
SMC4Q9NTJ3 Y_RNA.94-201ENST00000363068 106 ntBASIC-1.22□□□□□ -2.6
SMC4Q9NTJ3 SNORD45A-201ENST00000384512 84 ntBASIC-1.22□□□□□ -2.6
SMC4Q9NTJ3 MIR601-201ENST00000385256 79 ntBASIC-1.22□□□□□ -2.6
SMC4Q9NTJ3 U7.5-201ENST00000517224 61 ntBASIC-1.22□□□□□ -2.6
SMC4Q9NTJ3 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.23□□□□□ -2.61
SMC4Q9NTJ3 SNORD113.1-201ENST00000363280 73 ntBASIC-1.23□□□□□ -2.61
SMC4Q9NTJ3 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.23□□□□□ -2.61
SMC4Q9NTJ3 RNU6-1276P-201ENST00000365372 104 ntBASIC-1.23□□□□□ -2.61
SMC4Q9NTJ3 Y_RNA.369-201ENST00000365568 117 ntBASIC-1.23□□□□□ -2.61
SMC4Q9NTJ3 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.24□□□□□ -2.61
SMC4Q9NTJ3 RNU6-787P-201ENST00000384032 107 ntBASIC-1.24□□□□□ -2.61
SMC4Q9NTJ3 SNORA26.4-201ENST00000391188 123 ntBASIC-1.24□□□□□ -2.61
SMC4Q9NTJ3 RNU7-134P-201ENST00000458997 64 ntBASIC-1.24□□□□□ -2.61
SMC4Q9NTJ3 RNA5SP461-201ENST00000516451 104 ntBASIC-1.25□□□□□ -2.61
SMC4Q9NTJ3 MIR3115-201ENST00000577915 68 ntBASIC-1.25□□□□□ -2.61
SMC4Q9NTJ3 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.25□□□□□ -2.61
SMC4Q9NTJ3 RNA5SP192-201ENST00000364404 120 ntBASIC-1.26□□□□□ -2.61
SMC4Q9NTJ3 RNU6-587P-201ENST00000391282 106 ntBASIC-1.26□□□□□ -2.61
SMC4Q9NTJ3 AC062037.1-201ENST00000605302 128 ntBASIC-1.26□□□□□ -2.61
SMC4Q9NTJ3 U4.4-201ENST00000620626 117 ntBASIC-1.26□□□□□ -2.61
SMC4Q9NTJ3 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.27□□□□□ -2.61
SMC4Q9NTJ3 RNU6-242P-201ENST00000384359 107 ntBASIC-1.27□□□□□ -2.61
SMC4Q9NTJ3 snoU83B.1-201ENST00000517136 88 ntBASIC-1.27□□□□□ -2.61
SMC4Q9NTJ3 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.27□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms