Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 SNORD74.6-201ENST00000364796 70 ntBASIC-0.45□□□□□ -2.48
PCDH9Q9HC56 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.45□□□□□ -2.48
PCDH9Q9HC56 SNORA32.3-201ENST00000384772 121 ntBASIC-0.45□□□□□ -2.48
PCDH9Q9HC56 MIR518B-201ENST00000385127 83 ntBASIC-0.45□□□□□ -2.48
PCDH9Q9HC56 RNU6-70P-201ENST00000516438 60 ntBASIC-0.45□□□□□ -2.48
PCDH9Q9HC56 MIR4464-201ENST00000580818 92 ntBASIC-0.45□□□□□ -2.48
PCDH9Q9HC56 SNORA62.4-201ENST00000365504 151 ntBASIC-0.46□□□□□ -2.48
PCDH9Q9HC56 RNU6-1124P-201ENST00000384169 107 ntBASIC-0.46□□□□□ -2.48
PCDH9Q9HC56 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.46□□□□□ -2.48
PCDH9Q9HC56 RNA5SP451-201ENST00000410588 110 ntBASIC-0.46□□□□□ -2.48
PCDH9Q9HC56 RNU6-518P-201ENST00000516056 96 ntBASIC-0.46□□□□□ -2.48
PCDH9Q9HC56 MIR548AZ-201ENST00000616567 95 ntBASIC-0.46□□□□□ -2.48
PCDH9Q9HC56 MIR3202-2-201ENST00000635980 79 ntBASIC-0.47□□□□□ -2.48
PCDH9Q9HC56 SNORD115-22-201ENST00000364456 82 ntBASIC-0.48□□□□□ -2.49
PCDH9Q9HC56 MIR519A2-201ENST00000384990 87 ntBASIC-0.48□□□□□ -2.49
PCDH9Q9HC56 RNU6-881P-201ENST00000516813 102 ntBASIC-0.48□□□□□ -2.49
PCDH9Q9HC56 SNORD45A-201ENST00000384512 84 ntBASIC-0.49□□□□□ -2.49
PCDH9Q9HC56 RNU6-30P-201ENST00000384561 107 ntBASIC-0.49□□□□□ -2.49
PCDH9Q9HC56 MIR1255A-201ENST00000408338 113 ntBASIC-0.49□□□□□ -2.49
PCDH9Q9HC56 snoU13.19-201ENST00000459148 104 ntBASIC-0.49□□□□□ -2.49
PCDH9Q9HC56 MIR8053-201ENST00000613344 75 ntBASIC-0.49□□□□□ -2.49
PCDH9Q9HC56 MIR6888-201ENST00000621977 67 ntBASIC-0.49□□□□□ -2.49
PCDH9Q9HC56 Y_RNA.788-201ENST00000622394 112 ntBASIC-0.49□□□□□ -2.49
PCDH9Q9HC56 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.5□□□□□ -2.49
PCDH9Q9HC56 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.5□□□□□ -2.49
PCDH9Q9HC56 RNU6-721P-201ENST00000410155 105 ntBASIC-0.5□□□□□ -2.49
PCDH9Q9HC56 RNU7-154P-201ENST00000516194 62 ntBASIC-0.5□□□□□ -2.49
PCDH9Q9HC56 SNORD22.1-201ENST00000516331 125 ntBASIC-0.5□□□□□ -2.49
PCDH9Q9HC56 MIR4436A-201ENST00000585278 85 ntBASIC-0.5□□□□□ -2.49
PCDH9Q9HC56 RNU6-228P-201ENST00000362700 106 ntBASIC-0.51□□□□□ -2.49
PCDH9Q9HC56 SNORD113.1-201ENST00000363280 73 ntBASIC-0.51□□□□□ -2.49
PCDH9Q9HC56 SNORD95.1-201ENST00000364099 68 ntBASIC-0.51□□□□□ -2.49
PCDH9Q9HC56 SNORD114-15-201ENST00000364687 72 ntBASIC-0.51□□□□□ -2.49
PCDH9Q9HC56 MIR124-2-201ENST00000385081 109 ntBASIC-0.51□□□□□ -2.49
PCDH9Q9HC56 MIR154-201ENST00000385243 84 ntBASIC-0.51□□□□□ -2.49
PCDH9Q9HC56 SNORD75.1-201ENST00000408373 60 ntBASIC-0.51□□□□□ -2.49
PCDH9Q9HC56 MIR1302-4-201ENST00000408701 150 ntBASIC-0.51□□□□□ -2.49
PCDH9Q9HC56 AL021921.1-201ENST00000442774 93 ntBASIC-0.51□□□□□ -2.49
PCDH9Q9HC56 RPS29P8-201ENST00000445109 171 ntBASIC-0.51□□□□□ -2.49
PCDH9Q9HC56 MTND4LP1-201ENST00000446263 157 ntBASIC-0.51□□□□□ -2.49
PCDH9Q9HC56 AC021146.6-201ENST00000514659 117 ntBASIC-0.51□□□□□ -2.49
PCDH9Q9HC56 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.51□□□□□ -2.49
PCDH9Q9HC56 MIR3179-1-201ENST00000578940 84 ntBASIC-0.51□□□□□ -2.49
PCDH9Q9HC56 MIR3179-2-201ENST00000579107 84 ntBASIC-0.51□□□□□ -2.49
PCDH9Q9HC56 MIR3134-201ENST00000579433 74 ntBASIC-0.51□□□□□ -2.49
PCDH9Q9HC56 MIR3179-3-201ENST00000579566 84 ntBASIC-0.51□□□□□ -2.49
PCDH9Q9HC56 AL445584.3-201ENST00000617173 78 ntBASIC-0.51□□□□□ -2.49
PCDH9Q9HC56 MIR3179-4-201ENST00000617599 84 ntBASIC-0.51□□□□□ -2.49
PCDH9Q9HC56 U2.7-201ENST00000619197 100 ntBASIC-0.51□□□□□ -2.49
PCDH9Q9HC56 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.51□□□□□ -2.49
PCDH9Q9HC56 RNU6-1241P-201ENST00000384536 107 ntBASIC-0.52□□□□□ -2.49
PCDH9Q9HC56 MIR224-201ENST00000384889 81 ntBASIC-0.52□□□□□ -2.49
PCDH9Q9HC56 SNORA3B-201ENST00000391305 131 ntBASIC-0.52□□□□□ -2.49
PCDH9Q9HC56 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.54□□□□□ -2.5
PCDH9Q9HC56 RNU6-668P-201ENST00000364180 107 ntBASIC-0.55□□□□□ -2.5
PCDH9Q9HC56 SNORD18.2-201ENST00000459604 70 ntBASIC-0.55□□□□□ -2.5
PCDH9Q9HC56 MIR3681-201ENST00000580089 72 ntBASIC-0.55□□□□□ -2.5
PCDH9Q9HC56 U7.4-201ENST00000614961 63 ntBASIC-0.55□□□□□ -2.5
PCDH9Q9HC56 RNU6-895P-201ENST00000384125 103 ntBASIC-0.56□□□□□ -2.5
PCDH9Q9HC56 SNORD78.1-201ENST00000390866 65 ntBASIC-0.56□□□□□ -2.5
PCDH9Q9HC56 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.57□□□□□ -2.5
PCDH9Q9HC56 RNU6-587P-201ENST00000391282 106 ntBASIC-0.57□□□□□ -2.5
PCDH9Q9HC56 AP000533.3-201ENST00000447704 118 ntBASIC-0.57□□□□□ -2.5
PCDH9Q9HC56 MIR548AG1-201ENST00000579932 66 ntBASIC-0.57□□□□□ -2.5
PCDH9Q9HC56 MIR548V-201ENST00000584165 80 ntBASIC-0.57□□□□□ -2.5
PCDH9Q9HC56 MIR517B-201ENST00000385102 67 ntBASIC-0.58□□□□□ -2.5
PCDH9Q9HC56 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.58□□□□□ -2.5
PCDH9Q9HC56 RNA5SP225-201ENST00000410874 135 ntBASIC-0.58□□□□□ -2.5
PCDH9Q9HC56 RNU6-857P-201ENST00000515893 110 ntBASIC-0.58□□□□□ -2.5
PCDH9Q9HC56 RNU7-174P-201ENST00000516248 59 ntBASIC-0.58□□□□□ -2.5
PCDH9Q9HC56 RNU6-924P-201ENST00000362926 108 ntBASIC-0.59□□□□□ -2.5
PCDH9Q9HC56 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.59□□□□□ -2.5
PCDH9Q9HC56 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.59□□□□□ -2.5
PCDH9Q9HC56 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.6□□□□□ -2.51
PCDH9Q9HC56 RNU6-411P-201ENST00000384451 107 ntBASIC-0.6□□□□□ -2.51
PCDH9Q9HC56 SNORD115-31-201ENST00000365318 82 ntBASIC-0.61□□□□□ -2.51
PCDH9Q9HC56 RNU6-24P-201ENST00000384440 107 ntBASIC-0.61□□□□□ -2.51
PCDH9Q9HC56 RNU4-63P-201ENST00000411313 118 ntBASIC-0.61□□□□□ -2.51
PCDH9Q9HC56 RNU6-687P-201ENST00000516443 89 ntBASIC-0.61□□□□□ -2.51
PCDH9Q9HC56 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.62□□□□□ -2.51
PCDH9Q9HC56 RNU6-279P-201ENST00000391297 101 ntBASIC-0.62□□□□□ -2.51
PCDH9Q9HC56 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.62□□□□□ -2.51
PCDH9Q9HC56 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.63□□□□□ -2.51
PCDH9Q9HC56 MIR889-201ENST00000401280 79 ntBASIC-0.63□□□□□ -2.51
PCDH9Q9HC56 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.64□□□□□ -2.51
PCDH9Q9HC56 RNU6-698P-201ENST00000363523 107 ntBASIC-0.64□□□□□ -2.51
PCDH9Q9HC56 RNU6-34P-201ENST00000364874 107 ntBASIC-0.64□□□□□ -2.51
PCDH9Q9HC56 RNU6-246P-201ENST00000384702 107 ntBASIC-0.64□□□□□ -2.51
PCDH9Q9HC56 MIR630-201ENST00000384957 97 ntBASIC-0.64□□□□□ -2.51
PCDH9Q9HC56 MIR147A-201ENST00000385079 72 ntBASIC-0.64□□□□□ -2.51
PCDH9Q9HC56 RNU6-1015P-201ENST00000517121 99 ntBASIC-0.64□□□□□ -2.51
PCDH9Q9HC56 RNA5SP215-201ENST00000363440 122 ntBASIC-0.65□□□□□ -2.51
PCDH9Q9HC56 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.65□□□□□ -2.51
PCDH9Q9HC56 SNORD114-17-201ENST00000364699 75 ntBASIC-0.65□□□□□ -2.51
PCDH9Q9HC56 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.65□□□□□ -2.51
PCDH9Q9HC56 SNORD116-24-201ENST00000384549 92 ntBASIC-0.65□□□□□ -2.51
PCDH9Q9HC56 RNU6-431P-201ENST00000383874 107 ntBASIC-0.66□□□□□ -2.52
PCDH9Q9HC56 MT-TQ-201ENST00000387372 72 ntBASIC-0.66□□□□□ -2.52
PCDH9Q9HC56 RNA5SP67-201ENST00000516422 131 ntBASIC-0.66□□□□□ -2.52
PCDH9Q9HC56 U4.4-201ENST00000620626 117 ntBASIC-0.66□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 332.4 ms