Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 Y_RNA.69-201ENST00000362885 109 ntBASIC0.83□□□□□ -2.28
CNTNAP4Q9C0A0 SNORD114-29-201ENST00000364819 70 ntBASIC0.83□□□□□ -2.28
CNTNAP4Q9C0A0 MIR518A1-201ENST00000385068 85 ntBASIC0.83□□□□□ -2.28
CNTNAP4Q9C0A0 RNU4-54P-201ENST00000516428 129 ntBASIC0.83□□□□□ -2.28
CNTNAP4Q9C0A0 Y_RNA.698-201ENST00000516798 118 ntBASIC0.83□□□□□ -2.28
CNTNAP4Q9C0A0 MIR4677-201ENST00000584153 80 ntBASIC0.83□□□□□ -2.28
CNTNAP4Q9C0A0 RN7SL660P-201ENST00000614852 299 ntBASIC0.83□□□□□ -2.28
CNTNAP4Q9C0A0 RNA5SP499-201ENST00000363982 119 ntBASIC0.82□□□□□ -2.28
CNTNAP4Q9C0A0 RNU6-1036P-201ENST00000383959 104 ntBASIC0.82□□□□□ -2.28
CNTNAP4Q9C0A0 RPL39P28-201ENST00000465655 155 ntBASIC0.82□□□□□ -2.28
CNTNAP4Q9C0A0 RNU6-1206P-201ENST00000516339 103 ntBASIC0.82□□□□□ -2.28
CNTNAP4Q9C0A0 RNU6-30P-201ENST00000384561 107 ntBASIC0.81□□□□□ -2.28
CNTNAP4Q9C0A0 RNU6-1250P-201ENST00000391218 107 ntBASIC0.81□□□□□ -2.28
CNTNAP4Q9C0A0 RNA5SP470-201ENST00000516463 106 ntBASIC0.81□□□□□ -2.28
CNTNAP4Q9C0A0 RNU6-247P-201ENST00000362636 107 ntBASIC0.8□□□□□ -2.28
CNTNAP4Q9C0A0 SNORD115-23-201ENST00000364461 82 ntBASIC0.8□□□□□ -2.28
CNTNAP4Q9C0A0 Y_RNA.423-201ENST00000384057 113 ntBASIC0.8□□□□□ -2.28
CNTNAP4Q9C0A0 RNU6-229P-201ENST00000516614 102 ntBASIC0.8□□□□□ -2.28
CNTNAP4Q9C0A0 AL353803.5-201ENST00000599815 141 ntBASIC0.8□□□□□ -2.28
CNTNAP4Q9C0A0 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.8□□□□□ -2.28
CNTNAP4Q9C0A0 RNA5SP331-201ENST00000364986 107 ntBASIC0.79□□□□□ -2.28
CNTNAP4Q9C0A0 MIR125B1-201ENST00000385236 88 ntBASIC0.79□□□□□ -2.28
CNTNAP4Q9C0A0 MIR3925-201ENST00000584674 77 ntBASIC0.79□□□□□ -2.28
CNTNAP4Q9C0A0 MIR4653-201ENST00000585107 83 ntBASIC0.79□□□□□ -2.28
CNTNAP4Q9C0A0 RNU6-1262P-201ENST00000516217 96 ntBASIC0.78□□□□□ -2.28
CNTNAP4Q9C0A0 MIR6759-201ENST00000638110 65 ntBASIC0.78□□□□□ -2.28
CNTNAP4Q9C0A0 RNU6-974P-201ENST00000384099 108 ntBASIC0.77□□□□□ -2.29
CNTNAP4Q9C0A0 MIR146A-201ENST00000385201 99 ntBASIC0.77□□□□□ -2.29
CNTNAP4Q9C0A0 RNU7-160P-201ENST00000516660 62 ntBASIC0.77□□□□□ -2.29
CNTNAP4Q9C0A0 RNU6-1267P-201ENST00000410747 107 ntBASIC0.76□□□□□ -2.29
CNTNAP4Q9C0A0 PSMC1P5-201ENST00000512850 177 ntBASIC0.76□□□□□ -2.29
CNTNAP4Q9C0A0 MIR548AL-201ENST00000578416 97 ntBASIC0.76□□□□□ -2.29
CNTNAP4Q9C0A0 MIR4464-201ENST00000580818 92 ntBASIC0.76□□□□□ -2.29
CNTNAP4Q9C0A0 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.76□□□□□ -2.29
CNTNAP4Q9C0A0 MIR429-201ENST00000362106 83 ntBASIC0.75□□□□□ -2.29
CNTNAP4Q9C0A0 snoU13.19-201ENST00000459148 104 ntBASIC0.75□□□□□ -2.29
CNTNAP4Q9C0A0 MIR6888-201ENST00000621977 67 ntBASIC0.74□□□□□ -2.29
CNTNAP4Q9C0A0 MTRNR2L9-201ENST00000622562 75 ntBASIC0.74□□□□□ -2.29
CNTNAP4Q9C0A0 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
CNTNAP4Q9C0A0 RNA5SP63-201ENST00000391225 112 ntBASIC0.73□□□□□ -2.29
CNTNAP4Q9C0A0 MIR876-201ENST00000401147 81 ntBASIC0.73□□□□□ -2.29
CNTNAP4Q9C0A0 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.73□□□□□ -2.29
CNTNAP4Q9C0A0 AL451105.1-201ENST00000450005 189 ntBASIC0.73□□□□□ -2.29
CNTNAP4Q9C0A0 MIR4432-201ENST00000581823 84 ntBASIC0.73□□□□□ -2.29
CNTNAP4Q9C0A0 AC084368.1-201ENST00000620935 65 ntBASIC0.73□□□□□ -2.29
CNTNAP4Q9C0A0 Y_RNA.139-201ENST00000363464 102 ntBASIC0.72□□□□□ -2.29
CNTNAP4Q9C0A0 MIR760-201ENST00000390220 80 ntBASIC0.72□□□□□ -2.29
CNTNAP4Q9C0A0 RNU6-724P-201ENST00000390958 105 ntBASIC0.72□□□□□ -2.29
CNTNAP4Q9C0A0 U7.5-201ENST00000517224 61 ntBASIC0.72□□□□□ -2.29
CNTNAP4Q9C0A0 MIR4514-201ENST00000581410 57 ntBASIC0.72□□□□□ -2.29
CNTNAP4Q9C0A0 AC108676.2-201ENST00000605225 163 ntBASIC0.72□□□□□ -2.29
CNTNAP4Q9C0A0 MIR499B-201ENST00000636498 73 ntBASIC0.72□□□□□ -2.29
CNTNAP4Q9C0A0 MIR329-2-201ENST00000385029 84 ntBASIC0.71□□□□□ -2.3
CNTNAP4Q9C0A0 RNU6-696P-201ENST00000390834 107 ntBASIC0.71□□□□□ -2.3
CNTNAP4Q9C0A0 SNORD57-201ENST00000448188 72 ntBASIC0.71□□□□□ -2.3
CNTNAP4Q9C0A0 SNORA62.5-201ENST00000516634 120 ntBASIC0.71□□□□□ -2.3
CNTNAP4Q9C0A0 AP000676.1-201ENST00000533307 52 ntBASIC0.71□□□□□ -2.3
CNTNAP4Q9C0A0 MIR5589-201ENST00000579442 60 ntBASIC0.71□□□□□ -2.3
CNTNAP4Q9C0A0 MIR5087-201ENST00000635826 76 ntBASIC0.71□□□□□ -2.3
CNTNAP4Q9C0A0 MIR548AA1-201ENST00000384971 97 ntBASIC0.7□□□□□ -2.3
CNTNAP4Q9C0A0 RNU7-88P-201ENST00000458752 63 ntBASIC0.7□□□□□ -2.3
CNTNAP4Q9C0A0 RNU6-828P-201ENST00000364876 107 ntBASIC0.69□□□□□ -2.3
CNTNAP4Q9C0A0 MIR106A-201ENST00000384870 81 ntBASIC0.69□□□□□ -2.3
CNTNAP4Q9C0A0 RNA5SP128-201ENST00000365305 116 ntBASIC0.68□□□□□ -2.3
CNTNAP4Q9C0A0 MIR29B1-201ENST00000385015 81 ntBASIC0.68□□□□□ -2.3
CNTNAP4Q9C0A0 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.68□□□□□ -2.3
CNTNAP4Q9C0A0 RNU6-1174P-201ENST00000517278 101 ntBASIC0.68□□□□□ -2.3
CNTNAP4Q9C0A0 MIR4802-201ENST00000581881 80 ntBASIC0.68□□□□□ -2.3
CNTNAP4Q9C0A0 AL445584.3-201ENST00000617173 78 ntBASIC0.68□□□□□ -2.3
CNTNAP4Q9C0A0 SNORD44.1-201ENST00000363202 61 ntBASIC0.66□□□□□ -2.3
CNTNAP4Q9C0A0 MIR548H4-201ENST00000408689 111 ntBASIC0.66□□□□□ -2.3
CNTNAP4Q9C0A0 SCARNA11.2-201ENST00000517183 154 ntBASIC0.66□□□□□ -2.3
CNTNAP4Q9C0A0 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
CNTNAP4Q9C0A0 RNU6-945P-201ENST00000383947 107 ntBASIC0.65□□□□□ -2.3
CNTNAP4Q9C0A0 RNU6-1008P-201ENST00000384160 104 ntBASIC0.65□□□□□ -2.3
CNTNAP4Q9C0A0 RNA5SP67-201ENST00000516422 131 ntBASIC0.65□□□□□ -2.3
CNTNAP4Q9C0A0 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
CNTNAP4Q9C0A0 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.65□□□□□ -2.31
CNTNAP4Q9C0A0 RNU6-995P-201ENST00000391244 107 ntBASIC0.64□□□□□ -2.31
CNTNAP4Q9C0A0 uc_338.36-201ENST00000622331 158 ntBASIC0.64□□□□□ -2.31
CNTNAP4Q9C0A0 RNU6-742P-201ENST00000365289 107 ntBASIC0.64□□□□□ -2.31
CNTNAP4Q9C0A0 MIR92A1-201ENST00000385233 78 ntBASIC0.64□□□□□ -2.31
CNTNAP4Q9C0A0 RNU6ATAC14P-201ENST00000516218 91 ntBASIC0.64□□□□□ -2.31
CNTNAP4Q9C0A0 MIR3170-201ENST00000582699 77 ntBASIC0.64□□□□□ -2.31
CNTNAP4Q9C0A0 RNU7-55P-201ENST00000459426 62 ntBASIC0.63□□□□□ -2.31
CNTNAP4Q9C0A0 RNU7-129P-201ENST00000516128 62 ntBASIC0.63□□□□□ -2.31
CNTNAP4Q9C0A0 AC023932.2-201ENST00000603176 175 ntBASIC0.63□□□□□ -2.31
CNTNAP4Q9C0A0 RNU6-258P-201ENST00000390884 101 ntBASIC0.62□□□□□ -2.31
CNTNAP4Q9C0A0 RNA5SP25-201ENST00000410815 110 ntBASIC0.62□□□□□ -2.31
CNTNAP4Q9C0A0 SNORD63.1-201ENST00000516178 80 ntBASIC0.62□□□□□ -2.31
CNTNAP4Q9C0A0 MIR8068-201ENST00000618032 68 ntBASIC0.62□□□□□ -2.31
CNTNAP4Q9C0A0 AC114737.2-201ENST00000421583 173 ntBASIC0.61□□□□□ -2.31
CNTNAP4Q9C0A0 SNORD63.2-201ENST00000516303 64 ntBASIC0.61□□□□□ -2.31
CNTNAP4Q9C0A0 AL391099.1-201ENST00000624635 187 ntBASIC0.61□□□□□ -2.31
CNTNAP4Q9C0A0 MIR103A1-201ENST00000362165 78 ntBASIC0.6□□□□□ -2.31
CNTNAP4Q9C0A0 RNU6-1204P-201ENST00000363948 107 ntBASIC0.6□□□□□ -2.31
CNTNAP4Q9C0A0 MIR5704-201ENST00000584029 77 ntBASIC0.6□□□□□ -2.31
CNTNAP4Q9C0A0 MIR4723-201ENST00000585070 81 ntBASIC0.6□□□□□ -2.31
CNTNAP4Q9C0A0 snoR1.1-201ENST00000628177 80 ntBASIC0.6□□□□□ -2.31
CNTNAP4Q9C0A0 RNA5SP98-201ENST00000363158 137 ntBASIC0.59□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 243 ms