Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 MIR125B1-201ENST00000385236 88 ntBASIC-4.49□□□□□ -3.13
ABCA3Q99758 Y_RNA.563-201ENST00000384707 108 ntBASIC-4.52□□□□□ -3.13
ABCA3Q99758 RNU6-1169P-201ENST00000363537 103 ntBASIC-4.52□□□□□ -3.13
ABCA3Q99758 SNORA41B-201ENST00000384785 128 ntBASIC-4.52□□□□□ -3.13
ABCA3Q99758 MIR3688-2-201ENST00000636963 87 ntBASIC-4.52□□□□□ -3.13
ABCA3Q99758 Y_RNA.264-201ENST00000364665 102 ntBASIC-4.53□□□□□ -3.13
ABCA3Q99758 SNORD37.2-201ENST00000391075 66 ntBASIC-4.53□□□□□ -3.13
ABCA3Q99758 RNU6-972P-201ENST00000391208 107 ntBASIC-4.53□□□□□ -3.13
ABCA3Q99758 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-4.53□□□□□ -3.13
ABCA3Q99758 RNU6-639P-201ENST00000384074 107 ntBASIC-4.55□□□□□ -3.14
ABCA3Q99758 U2.14-201ENST00000615943 113 ntBASIC-4.55□□□□□ -3.14
ABCA3Q99758 Y_RNA.11-201ENST00000362375 109 ntBASIC-4.56□□□□□ -3.14
ABCA3Q99758 Y_RNA.320-201ENST00000365144 102 ntBASIC-4.56□□□□□ -3.14
ABCA3Q99758 Y_RNA.435-201ENST00000384095 112 ntBASIC-4.56□□□□□ -3.14
ABCA3Q99758 SNORD77.2-201ENST00000391045 68 ntBASIC-4.56□□□□□ -3.14
ABCA3Q99758 U4.5-201ENST00000617137 123 ntBASIC-4.56□□□□□ -3.14
ABCA3Q99758 Y_RNA.276-201ENST00000364732 109 ntBASIC-4.57□□□□□ -3.14
ABCA3Q99758 Y_RNA.478-201ENST00000384358 107 ntBASIC-4.57□□□□□ -3.14
ABCA3Q99758 RNU2-16P-201ENST00000410712 136 ntBASIC-4.57□□□□□ -3.14
ABCA3Q99758 RNU6-590P-201ENST00000365039 107 ntBASIC-4.58□□□□□ -3.14
ABCA3Q99758 RNU6-239P-201ENST00000390990 99 ntBASIC-4.58□□□□□ -3.14
ABCA3Q99758 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-4.58□□□□□ -3.14
ABCA3Q99758 MIR3658-201ENST00000636291 56 ntBASIC-4.58□□□□□ -3.14
ABCA3Q99758 RNU6-450P-201ENST00000364654 107 ntBASIC-4.59□□□□□ -3.14
ABCA3Q99758 RNU6-554P-201ENST00000410466 106 ntBASIC-4.59□□□□□ -3.14
ABCA3Q99758 RNU6-300P-201ENST00000459080 104 ntBASIC-4.59□□□□□ -3.14
ABCA3Q99758 RNU6-781P-201ENST00000516377 101 ntBASIC-4.59□□□□□ -3.14
ABCA3Q99758 MIR4679-2-201ENST00000578358 77 ntBASIC-4.59□□□□□ -3.14
ABCA3Q99758 MIR4777-201ENST00000583710 86 ntBASIC-4.59□□□□□ -3.14
ABCA3Q99758 SNORD45.2-201ENST00000363552 72 ntBASIC-4.6□□□□□ -3.15
ABCA3Q99758 SNORD127-201ENST00000458892 86 ntBASIC-4.6□□□□□ -3.15
ABCA3Q99758 RNU6-854P-201ENST00000364036 107 ntBASIC-4.6□□□□□ -3.15
ABCA3Q99758 Y_RNA.210-201ENST00000364161 110 ntBASIC-4.6□□□□□ -3.15
ABCA3Q99758 RNU6-1124P-201ENST00000384169 107 ntBASIC-4.6□□□□□ -3.15
ABCA3Q99758 MIR1277-201ENST00000408536 78 ntBASIC-4.61□□□□□ -3.15
ABCA3Q99758 RNU6-887P-201ENST00000410660 100 ntBASIC-4.62□□□□□ -3.15
ABCA3Q99758 RNU6-172P-201ENST00000411000 93 ntBASIC-4.62□□□□□ -3.15
ABCA3Q99758 Y_RNA.705-201ENST00000516862 110 ntBASIC-4.62□□□□□ -3.15
ABCA3Q99758 MTND3P3-201ENST00000505004 126 ntBASIC-4.63□□□□□ -3.15
ABCA3Q99758 Y_RNA.680-201ENST00000516441 93 ntBASIC-4.63□□□□□ -3.15
ABCA3Q99758 MIR548AH-201ENST00000637109 76 ntBASIC-4.63□□□□□ -3.15
ABCA3Q99758 Y_RNA.96-201ENST00000363092 109 ntBASIC-4.64□□□□□ -3.15
ABCA3Q99758 MTND4LP1-201ENST00000446263 157 ntBASIC-4.64□□□□□ -3.15
ABCA3Q99758 RNU7-160P-201ENST00000516660 62 ntBASIC-4.64□□□□□ -3.15
ABCA3Q99758 RNU6-537P-201ENST00000517277 103 ntBASIC-4.64□□□□□ -3.15
ABCA3Q99758 RNU6-982P-201ENST00000516216 102 ntBASIC-4.65□□□□□ -3.15
ABCA3Q99758 RNU7-121P-201ENST00000516604 62 ntBASIC-4.65□□□□□ -3.15
ABCA3Q99758 RNU6-277P-201ENST00000516272 106 ntBASIC-4.66□□□□□ -3.16
ABCA3Q99758 Y_RNA.516-201ENST00000384541 124 ntBASIC-4.67□□□□□ -3.16
ABCA3Q99758 AC069439.1-201ENST00000494739 167 ntBASIC-4.67□□□□□ -3.16
ABCA3Q99758 Y_RNA.277-201ENST00000364754 102 ntBASIC-4.68□□□□□ -3.16
ABCA3Q99758 MTND2P23-201ENST00000422990 651 ntBASIC-4.68□□□□□ -3.16
ABCA3Q99758 RNU6-1227P-201ENST00000383981 107 ntBASIC-4.69□□□□□ -3.16
ABCA3Q99758 RNU6-182P-201ENST00000516970 105 ntBASIC-4.69□□□□□ -3.16
ABCA3Q99758 MIR4426-201ENST00000640330 63 ntBASIC-4.69□□□□□ -3.16
ABCA3Q99758 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-4.69□□□□□ -3.16
ABCA3Q99758 MIR656-201ENST00000385224 78 ntBASIC-4.7□□□□□ -3.16
ABCA3Q99758 RNU7-153P-201ENST00000516455 62 ntBASIC-4.7□□□□□ -3.16
ABCA3Q99758 SNORD45.1-201ENST00000363181 77 ntBASIC-4.71□□□□□ -3.16
ABCA3Q99758 Y_RNA.632-201ENST00000459189 102 ntBASIC-4.71□□□□□ -3.16
ABCA3Q99758 RNU6-1296P-201ENST00000383879 107 ntBASIC-4.72□□□□□ -3.16
ABCA3Q99758 AC062037.1-201ENST00000605302 128 ntBASIC-4.72□□□□□ -3.16
ABCA3Q99758 MIR3974-201ENST00000637126 96 ntBASIC-4.72□□□□□ -3.16
ABCA3Q99758 SNORD116-10-201ENST00000363791 102 ntBASIC-4.72□□□□□ -3.17
ABCA3Q99758 RNU6-624P-201ENST00000363411 107 ntBASIC-4.73□□□□□ -3.17
ABCA3Q99758 RNU6-1340P-201ENST00000384438 107 ntBASIC-4.73□□□□□ -3.17
ABCA3Q99758 RNU6-795P-201ENST00000516323 103 ntBASIC-4.73□□□□□ -3.17
ABCA3Q99758 RNA5SP173-201ENST00000364857 136 ntBASIC-4.74□□□□□ -3.17
ABCA3Q99758 MIR363-201ENST00000384840 75 ntBASIC-4.74□□□□□ -3.17
ABCA3Q99758 RNU6-822P-201ENST00000362707 106 ntBASIC-4.75□□□□□ -3.17
ABCA3Q99758 RNU6-915P-201ENST00000364943 103 ntBASIC-4.75□□□□□ -3.17
ABCA3Q99758 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC-4.75□□□□□ -3.17
ABCA3Q99758 MIR5009-201ENST00000578736 100 ntBASIC-4.75□□□□□ -3.17
ABCA3Q99758 Y_RNA.609-201ENST00000410669 89 ntBASIC-4.75□□□□□ -3.17
ABCA3Q99758 Y_RNA.626-201ENST00000411288 95 ntBASIC-4.75□□□□□ -3.17
ABCA3Q99758 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-4.75□□□□□ -3.17
ABCA3Q99758 Y_RNA.43-201ENST00000362670 111 ntBASIC-4.76□□□□□ -3.17
ABCA3Q99758 Y_RNA.194-201ENST00000363985 102 ntBASIC-4.77□□□□□ -3.17
ABCA3Q99758 SNORA63-201ENST00000363450 132 ntBASIC-4.77□□□□□ -3.17
ABCA3Q99758 RNU6-988P-201ENST00000519081 107 ntBASIC-4.77□□□□□ -3.17
ABCA3Q99758 MIR519C-201ENST00000385053 87 ntBASIC-4.79□□□□□ -3.18
ABCA3Q99758 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-4.79□□□□□ -3.18
ABCA3Q99758 RNU6-918P-201ENST00000391219 106 ntBASIC-4.79□□□□□ -3.18
ABCA3Q99758 RNU6-755P-201ENST00000364400 103 ntBASIC-4.8□□□□□ -3.18
ABCA3Q99758 RNU6-460P-201ENST00000391158 108 ntBASIC-4.8□□□□□ -3.18
ABCA3Q99758 Y_RNA.717-201ENST00000517106 92 ntBASIC-4.8□□□□□ -3.18
ABCA3Q99758 AP001340.1-201ENST00000624405 217 ntBASIC-4.8□□□□□ -3.18
ABCA3Q99758 Y_RNA.58-201ENST00000362807 102 ntBASIC-4.8□□□□□ -3.18
ABCA3Q99758 MT-TL1-201ENST00000386347 75 ntBASIC-4.8□□□□□ -3.18
ABCA3Q99758 RNU6-718P-201ENST00000516166 105 ntBASIC-4.8□□□□□ -3.18
ABCA3Q99758 MIR8053-201ENST00000613344 75 ntBASIC-4.8□□□□□ -3.18
ABCA3Q99758 AC113195.1-201ENST00000579952 141 ntBASIC-4.81□□□□□ -3.18
ABCA3Q99758 RNU6-1206P-201ENST00000516339 103 ntBASIC-4.82□□□□□ -3.18
ABCA3Q99758 SNORD116-4-201ENST00000384733 96 ntBASIC-4.83□□□□□ -3.18
ABCA3Q99758 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-4.83□□□□□ -3.18
ABCA3Q99758 RNU6-1241P-201ENST00000384536 107 ntBASIC-4.83□□□□□ -3.18
ABCA3Q99758 SNORD19B-201ENST00000459623 84 ntBASIC-4.83□□□□□ -3.18
ABCA3Q99758 RNU6-1108P-201ENST00000516308 104 ntBASIC-4.83□□□□□ -3.18
ABCA3Q99758 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-4.83□□□□□ -3.18
ABCA3Q99758 Y_RNA.69-201ENST00000362885 109 ntBASIC-4.84□□□□□ -3.18
Retrieved 100 of 98,524 protein–RNA pairs in 235.2 ms