Protein–RNA interactions for Protein: Q99250

SCN2A, Sodium channel protein type 2 subunit alpha, humanhuman

Predictions only

Length 2,005 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2AQ99250 SCARNA18B-201ENST00000458806 135 ntBASIC-0.9□□□□□ -2.55
SCN2AQ99250 MIR4490-201ENST00000582647 84 ntBASIC-0.9□□□□□ -2.55
SCN2AQ99250 RNU6-44P-201ENST00000384045 107 ntBASIC-0.91□□□□□ -2.55
SCN2AQ99250 RNA5SP89-201ENST00000410300 108 ntBASIC-0.91□□□□□ -2.55
SCN2AQ99250 RNU6-844P-201ENST00000517175 102 ntBASIC-0.91□□□□□ -2.55
SCN2AQ99250 MIR6738-201ENST00000619620 64 ntBASIC-0.91□□□□□ -2.55
SCN2AQ99250 RNU7-88P-201ENST00000458752 63 ntBASIC-0.91□□□□□ -2.56
SCN2AQ99250 MIR8053-201ENST00000613344 75 ntBASIC-0.91□□□□□ -2.56
SCN2AQ99250 MIR4320-201ENST00000636981 65 ntBASIC-0.91□□□□□ -2.56
SCN2AQ99250 RNU6-640P-201ENST00000363693 105 ntBASIC-0.92□□□□□ -2.56
SCN2AQ99250 SNORD114-17-201ENST00000364699 75 ntBASIC-0.92□□□□□ -2.56
SCN2AQ99250 RNU6-431P-201ENST00000383874 107 ntBASIC-0.92□□□□□ -2.56
SCN2AQ99250 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.92□□□□□ -2.56
SCN2AQ99250 MIR587-201ENST00000384845 96 ntBASIC-0.92□□□□□ -2.56
SCN2AQ99250 SNORD64-201ENST00000386683 67 ntBASIC-0.92□□□□□ -2.56
SCN2AQ99250 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.92□□□□□ -2.56
SCN2AQ99250 RNU7-174P-201ENST00000516248 59 ntBASIC-0.92□□□□□ -2.56
SCN2AQ99250 MIR548AI-201ENST00000579940 88 ntBASIC-0.92□□□□□ -2.56
SCN2AQ99250 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.92□□□□□ -2.56
SCN2AQ99250 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.92□□□□□ -2.56
SCN2AQ99250 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.93□□□□□ -2.56
SCN2AQ99250 RNU6-789P-201ENST00000517105 102 ntBASIC-0.93□□□□□ -2.56
SCN2AQ99250 MIR3165-201ENST00000579874 75 ntBASIC-0.93□□□□□ -2.56
SCN2AQ99250 RNY1P1-201ENST00000364372 112 ntBASIC-0.93□□□□□ -2.56
SCN2AQ99250 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-0.93□□□□□ -2.56
SCN2AQ99250 RNU6-557P-201ENST00000516842 110 ntBASIC-0.93□□□□□ -2.56
SCN2AQ99250 RNU6-219P-201ENST00000364728 107 ntBASIC-0.94□□□□□ -2.56
SCN2AQ99250 U4.4-201ENST00000620626 117 ntBASIC-0.94□□□□□ -2.56
SCN2AQ99250 MIR382-201ENST00000637119 76 ntBASIC-0.94□□□□□ -2.56
SCN2AQ99250 MTND4LP1-201ENST00000446263 157 ntBASIC-0.94□□□□□ -2.56
SCN2AQ99250 AL353691.2-201ENST00000443795 59 ntBASIC-0.95□□□□□ -2.56
SCN2AQ99250 AC093729.1-201ENST00000513074 128 ntBASIC-0.95□□□□□ -2.56
SCN2AQ99250 SNORD63.1-201ENST00000516178 80 ntBASIC-0.95□□□□□ -2.56
SCN2AQ99250 snoU83B.1-201ENST00000517136 88 ntBASIC-0.95□□□□□ -2.56
SCN2AQ99250 snoMBII-202.2-201ENST00000517263 86 ntBASIC-0.95□□□□□ -2.56
SCN2AQ99250 MIR365A-201ENST00000362260 87 ntBASIC-0.96□□□□□ -2.56
SCN2AQ99250 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.96□□□□□ -2.56
SCN2AQ99250 Y_RNA.532-201ENST00000384590 113 ntBASIC-0.96□□□□□ -2.56
SCN2AQ99250 AC074348.1-201ENST00000426503 132 ntBASIC-0.96□□□□□ -2.56
SCN2AQ99250 RNU6-807P-201ENST00000516805 107 ntBASIC-0.96□□□□□ -2.56
SCN2AQ99250 MIR4499-201ENST00000584834 69 ntBASIC-0.96□□□□□ -2.56
SCN2AQ99250 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.96□□□□□ -2.56
SCN2AQ99250 RNU6-478P-201ENST00000363904 110 ntBASIC-0.97□□□□□ -2.56
SCN2AQ99250 RNU6-982P-201ENST00000516216 102 ntBASIC-0.97□□□□□ -2.56
SCN2AQ99250 RNU6-706P-201ENST00000517229 104 ntBASIC-0.97□□□□□ -2.56
SCN2AQ99250 RNU6-698P-201ENST00000363523 107 ntBASIC-0.98□□□□□ -2.57
SCN2AQ99250 RNU6-34P-201ENST00000364874 107 ntBASIC-0.98□□□□□ -2.57
SCN2AQ99250 MIR154-201ENST00000385243 84 ntBASIC-0.98□□□□□ -2.57
SCN2AQ99250 MIRLET7A1-201ENST00000362295 80 ntBASIC-0.98□□□□□ -2.57
SCN2AQ99250 RNU6-215P-201ENST00000365169 102 ntBASIC-0.98□□□□□ -2.57
SCN2AQ99250 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.98□□□□□ -2.57
SCN2AQ99250 RNU7-171P-201ENST00000459581 62 ntBASIC-0.98□□□□□ -2.57
SCN2AQ99250 MIR4324-201ENST00000584846 72 ntBASIC-0.98□□□□□ -2.57
SCN2AQ99250 U2.7-201ENST00000619197 100 ntBASIC-0.99□□□□□ -2.57
SCN2AQ99250 SNORD113.1-201ENST00000363280 73 ntBASIC-0.99□□□□□ -2.57
SCN2AQ99250 MIR548BB-201ENST00000626714 66 ntBASIC-0.99□□□□□ -2.57
SCN2AQ99250 RNA5SP215-201ENST00000363440 122 ntBASIC-1□□□□□ -2.57
SCN2AQ99250 RNU6-1134P-201ENST00000365156 101 ntBASIC-1.01□□□□□ -2.57
SCN2AQ99250 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.01□□□□□ -2.57
SCN2AQ99250 RNU6-315P-201ENST00000362666 107 ntBASIC-1.02□□□□□ -2.57
SCN2AQ99250 Y_RNA.73-201ENST00000362910 113 ntBASIC-1.02□□□□□ -2.57
SCN2AQ99250 SNORD115-33-201ENST00000363723 82 ntBASIC-1.02□□□□□ -2.57
SCN2AQ99250 MIR1285-2-201ENST00000408311 88 ntBASIC-1.02□□□□□ -2.57
SCN2AQ99250 RNU6-645P-201ENST00000364649 106 ntBASIC-1.03□□□□□ -2.57
SCN2AQ99250 RNU6-686P-201ENST00000364839 107 ntBASIC-1.03□□□□□ -2.57
SCN2AQ99250 RNU6-246P-201ENST00000384702 107 ntBASIC-1.03□□□□□ -2.57
SCN2AQ99250 MIR630-201ENST00000384957 97 ntBASIC-1.03□□□□□ -2.57
SCN2AQ99250 MIR450A2-201ENST00000385022 100 ntBASIC-1.03□□□□□ -2.57
SCN2AQ99250 Y_RNA.593-201ENST00000410292 98 ntBASIC-1.03□□□□□ -2.57
SCN2AQ99250 RNU6-168P-201ENST00000516189 101 ntBASIC-1.03□□□□□ -2.57
SCN2AQ99250 MIR488-201ENST00000365739 83 ntBASIC-1.03□□□□□ -2.57
SCN2AQ99250 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.03□□□□□ -2.57
SCN2AQ99250 MIR429-201ENST00000362106 83 ntBASIC-1.04□□□□□ -2.58
SCN2AQ99250 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.04□□□□□ -2.58
SCN2AQ99250 RNU6-153P-201ENST00000364422 104 ntBASIC-1.04□□□□□ -2.58
SCN2AQ99250 RNU6-49P-201ENST00000384256 107 ntBASIC-1.04□□□□□ -2.58
SCN2AQ99250 RNU6-576P-201ENST00000390854 102 ntBASIC-1.04□□□□□ -2.58
SCN2AQ99250 MIR1207-201ENST00000408249 87 ntBASIC-1.04□□□□□ -2.58
SCN2AQ99250 RNU6-518P-201ENST00000516056 96 ntBASIC-1.04□□□□□ -2.58
SCN2AQ99250 AC138207.3-201ENST00000585289 166 ntBASIC-1.04□□□□□ -2.58
SCN2AQ99250 RNU6-696P-201ENST00000390834 107 ntBASIC-1.05□□□□□ -2.58
SCN2AQ99250 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.05□□□□□ -2.58
SCN2AQ99250 RNU6-70P-201ENST00000516438 60 ntBASIC-1.05□□□□□ -2.58
SCN2AQ99250 SNORD45.1-201ENST00000363181 77 ntBASIC-1.06□□□□□ -2.58
SCN2AQ99250 MIR527-201ENST00000385244 85 ntBASIC-1.06□□□□□ -2.58
SCN2AQ99250 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.06□□□□□ -2.58
SCN2AQ99250 AP002795.1-201ENST00000534879 84 ntBASIC-1.06□□□□□ -2.58
SCN2AQ99250 MIR6818-201ENST00000621576 65 ntBASIC-1.06□□□□□ -2.58
SCN2AQ99250 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.06□□□□□ -2.58
SCN2AQ99250 MIR29B1-201ENST00000385015 81 ntBASIC-1.06□□□□□ -2.58
SCN2AQ99250 HLA-S-202ENST00000425174 53 ntBASIC-1.06□□□□□ -2.58
SCN2AQ99250 MIR3115-201ENST00000577915 68 ntBASIC-1.06□□□□□ -2.58
SCN2AQ99250 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.07□□□□□ -2.58
SCN2AQ99250 RNU6-129P-201ENST00000391022 107 ntBASIC-1.07□□□□□ -2.58
SCN2AQ99250 RNU6-294P-201ENST00000364999 102 ntBASIC-1.08□□□□□ -2.58
SCN2AQ99250 RNU6-458P-201ENST00000384179 107 ntBASIC-1.08□□□□□ -2.58
SCN2AQ99250 RNU6-380P-201ENST00000410207 107 ntBASIC-1.08□□□□□ -2.58
SCN2AQ99250 RNU6-402P-201ENST00000410678 103 ntBASIC-1.08□□□□□ -2.58
SCN2AQ99250 U6.58-201ENST00000613107 107 ntBASIC-1.08□□□□□ -2.58
SCN2AQ99250 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.08□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms