Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 MIR3675-201ENST00000583661 73 ntBASIC-1.02□□□□□ -2.57
NR1H4Q96RI1 RNY1P1-201ENST00000364372 112 ntBASIC-1.03□□□□□ -2.57
NR1H4Q96RI1 MIR147A-201ENST00000385079 72 ntBASIC-1.03□□□□□ -2.57
NR1H4Q96RI1 RNY1P9-201ENST00000532431 109 ntBASIC-1.03□□□□□ -2.57
NR1H4Q96RI1 RNA5SP266-201ENST00000410273 108 ntBASIC-1.04□□□□□ -2.58
NR1H4Q96RI1 AL021921.1-201ENST00000442774 93 ntBASIC-1.04□□□□□ -2.58
NR1H4Q96RI1 RNU6-518P-201ENST00000516056 96 ntBASIC-1.04□□□□□ -2.58
NR1H4Q96RI1 RNA5SP461-201ENST00000516451 104 ntBASIC-1.04□□□□□ -2.58
NR1H4Q96RI1 RNU6-807P-201ENST00000516805 107 ntBASIC-1.04□□□□□ -2.58
NR1H4Q96RI1 RNA5SP192-201ENST00000364404 120 ntBASIC-1.05□□□□□ -2.58
NR1H4Q96RI1 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.05□□□□□ -2.58
NR1H4Q96RI1 SNORA8.1-201ENST00000384250 140 ntBASIC-1.05□□□□□ -2.58
NR1H4Q96RI1 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.05□□□□□ -2.58
NR1H4Q96RI1 RNY4P30-201ENST00000410216 95 ntBASIC-1.05□□□□□ -2.58
NR1H4Q96RI1 SNORD57-201ENST00000448188 72 ntBASIC-1.05□□□□□ -2.58
NR1H4Q96RI1 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.05□□□□□ -2.58
NR1H4Q96RI1 MIR4306-201ENST00000583390 91 ntBASIC-1.05□□□□□ -2.58
NR1H4Q96RI1 MIR1297-201ENST00000637311 77 ntBASIC-1.05□□□□□ -2.58
NR1H4Q96RI1 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.06□□□□□ -2.58
NR1H4Q96RI1 RNU6-153P-201ENST00000364422 104 ntBASIC-1.06□□□□□ -2.58
NR1H4Q96RI1 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.06□□□□□ -2.58
NR1H4Q96RI1 Y_RNA.607-201ENST00000410597 98 ntBASIC-1.06□□□□□ -2.58
NR1H4Q96RI1 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.07□□□□□ -2.58
NR1H4Q96RI1 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.07□□□□□ -2.58
NR1H4Q96RI1 Y_RNA.593-201ENST00000410292 98 ntBASIC-1.07□□□□□ -2.58
NR1H4Q96RI1 RNU6-924P-201ENST00000362926 108 ntBASIC-1.08□□□□□ -2.58
NR1H4Q96RI1 RNU6-226P-201ENST00000363778 107 ntBASIC-1.08□□□□□ -2.58
NR1H4Q96RI1 RNU6-49P-201ENST00000384256 107 ntBASIC-1.08□□□□□ -2.58
NR1H4Q96RI1 AL445584.3-201ENST00000617173 78 ntBASIC-1.08□□□□□ -2.58
NR1H4Q96RI1 RNU6-478P-201ENST00000363904 110 ntBASIC-1.09□□□□□ -2.58
NR1H4Q96RI1 AC074348.1-201ENST00000426503 132 ntBASIC-1.09□□□□□ -2.58
NR1H4Q96RI1 RNU6-656P-201ENST00000516785 107 ntBASIC-1.09□□□□□ -2.58
NR1H4Q96RI1 RNU6-645P-201ENST00000364649 106 ntBASIC-1.1□□□□□ -2.59
NR1H4Q96RI1 MIR519A2-201ENST00000384990 87 ntBASIC-1.1□□□□□ -2.59
NR1H4Q96RI1 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.1□□□□□ -2.59
NR1H4Q96RI1 Y_RNA.694-201ENST00000516677 117 ntBASIC-1.1□□□□□ -2.59
NR1H4Q96RI1 MIR4464-201ENST00000580818 92 ntBASIC-1.1□□□□□ -2.59
NR1H4Q96RI1 MIR6888-201ENST00000621977 67 ntBASIC-1.1□□□□□ -2.59
NR1H4Q96RI1 RNA5SP331-201ENST00000364986 107 ntBASIC-1.11□□□□□ -2.59
NR1H4Q96RI1 MIR548C-201ENST00000384815 97 ntBASIC-1.11□□□□□ -2.59
NR1H4Q96RI1 MIR3165-201ENST00000579874 75 ntBASIC-1.12□□□□□ -2.59
NR1H4Q96RI1 MIR5588-201ENST00000581890 63 ntBASIC-1.12□□□□□ -2.59
NR1H4Q96RI1 RNU6-330P-201ENST00000363015 107 ntBASIC-1.13□□□□□ -2.59
NR1H4Q96RI1 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.13□□□□□ -2.59
NR1H4Q96RI1 RNU6-315P-201ENST00000362666 107 ntBASIC-1.14□□□□□ -2.59
NR1H4Q96RI1 Y_RNA.73-201ENST00000362910 113 ntBASIC-1.14□□□□□ -2.59
NR1H4Q96RI1 SNORD45.1-201ENST00000363181 77 ntBASIC-1.14□□□□□ -2.59
NR1H4Q96RI1 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.14□□□□□ -2.59
NR1H4Q96RI1 MIR889-201ENST00000401280 79 ntBASIC-1.14□□□□□ -2.59
NR1H4Q96RI1 AL627230.5-201ENST00000619807 58 ntBASIC-1.14□□□□□ -2.59
NR1H4Q96RI1 MIR4320-201ENST00000636981 65 ntBASIC-1.14□□□□□ -2.59
NR1H4Q96RI1 SNORD114-17-201ENST00000364699 75 ntBASIC-1.15□□□□□ -2.59
NR1H4Q96RI1 RNU6-604P-201ENST00000390917 100 ntBASIC-1.15□□□□□ -2.59
NR1H4Q96RI1 MIR4484-201ENST00000582855 83 ntBASIC-1.15□□□□□ -2.59
NR1H4Q96RI1 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.16□□□□□ -2.6
NR1H4Q96RI1 RNU6-706P-201ENST00000517229 104 ntBASIC-1.16□□□□□ -2.6
NR1H4Q96RI1 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.17□□□□□ -2.6
NR1H4Q96RI1 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.17□□□□□ -2.6
NR1H4Q96RI1 U2.7-201ENST00000619197 100 ntBASIC-1.17□□□□□ -2.6
NR1H4Q96RI1 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.18□□□□□ -2.6
NR1H4Q96RI1 HLA-S-202ENST00000425174 53 ntBASIC-1.18□□□□□ -2.6
NR1H4Q96RI1 Y_RNA.81-201ENST00000362997 102 ntBASIC-1.19□□□□□ -2.6
NR1H4Q96RI1 RNU6-979P-201ENST00000383896 107 ntBASIC-1.19□□□□□ -2.6
NR1H4Q96RI1 RNU6-242P-201ENST00000384359 107 ntBASIC-1.19□□□□□ -2.6
NR1H4Q96RI1 snoU83B.1-201ENST00000517136 88 ntBASIC-1.19□□□□□ -2.6
NR1H4Q96RI1 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-1.19□□□□□ -2.6
NR1H4Q96RI1 Y_RNA.316-201ENST00000365118 111 ntBASIC-1.2□□□□□ -2.6
NR1H4Q96RI1 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.2□□□□□ -2.6
NR1H4Q96RI1 MTND4LP1-201ENST00000446263 157 ntBASIC-1.2□□□□□ -2.6
NR1H4Q96RI1 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.2□□□□□ -2.6
NR1H4Q96RI1 MIR5591-201ENST00000578248 65 ntBASIC-1.2□□□□□ -2.6
NR1H4Q96RI1 MIR8053-201ENST00000613344 75 ntBASIC-1.2□□□□□ -2.6
NR1H4Q96RI1 MIR450A2-201ENST00000385022 100 ntBASIC-1.21□□□□□ -2.6
NR1H4Q96RI1 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.21□□□□□ -2.6
NR1H4Q96RI1 RNU6-294P-201ENST00000364999 102 ntBASIC-1.22□□□□□ -2.6
NR1H4Q96RI1 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.22□□□□□ -2.6
NR1H4Q96RI1 MIR4520-1-201ENST00000582609 70 ntBASIC-1.22□□□□□ -2.6
NR1H4Q96RI1 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.23□□□□□ -2.61
NR1H4Q96RI1 RNU7-171P-201ENST00000459581 62 ntBASIC-1.23□□□□□ -2.61
NR1H4Q96RI1 MIR494-201ENST00000349529 81 ntBASIC-1.24□□□□□ -2.61
NR1H4Q96RI1 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.24□□□□□ -2.61
NR1H4Q96RI1 RNU6-540P-201ENST00000384622 101 ntBASIC-1.24□□□□□ -2.61
NR1H4Q96RI1 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.24□□□□□ -2.61
NR1H4Q96RI1 SNX3P1X-201ENST00000414887 175 ntBASIC-1.25□□□□□ -2.61
NR1H4Q96RI1 RNU6-982P-201ENST00000516216 102 ntBASIC-1.25□□□□□ -2.61
NR1H4Q96RI1 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.25□□□□□ -2.61
NR1H4Q96RI1 MIR6874-201ENST00000635894 71 ntBASIC-1.25□□□□□ -2.61
NR1H4Q96RI1 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.26□□□□□ -2.61
NR1H4Q96RI1 MIR6502-201ENST00000617296 76 ntBASIC-1.26□□□□□ -2.61
NR1H4Q96RI1 MIR1245B-201ENST00000636115 69 ntBASIC-1.27□□□□□ -2.61
NR1H4Q96RI1 SNORA26.4-201ENST00000391188 123 ntBASIC-1.28□□□□□ -2.61
NR1H4Q96RI1 MIR6818-201ENST00000621576 65 ntBASIC-1.28□□□□□ -2.61
NR1H4Q96RI1 AC091912.2-201ENST00000624798 167 ntBASIC-1.28□□□□□ -2.61
NR1H4Q96RI1 MIR198-201ENST00000637333 62 ntBASIC-1.28□□□□□ -2.61
NR1H4Q96RI1 SNORD115-33-201ENST00000363723 82 ntBASIC-1.29□□□□□ -2.62
NR1H4Q96RI1 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.29□□□□□ -2.62
NR1H4Q96RI1 Y_RNA.369-201ENST00000365568 117 ntBASIC-1.29□□□□□ -2.62
NR1H4Q96RI1 MIR527-201ENST00000385244 85 ntBASIC-1.29□□□□□ -2.62
NR1H4Q96RI1 AC138207.3-201ENST00000585289 166 ntBASIC-1.29□□□□□ -2.62
NR1H4Q96RI1 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.29□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms