Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.86□□□□□ -2.55
CCDC138Q96M89 AC090617.8-201ENST00000623339 167 ntBASIC-0.86□□□□□ -2.55
CCDC138Q96M89 RNU6-49P-201ENST00000384256 107 ntBASIC-0.87□□□□□ -2.55
CCDC138Q96M89 AC021146.6-201ENST00000514659 117 ntBASIC-0.87□□□□□ -2.55
CCDC138Q96M89 IGLL4P-201ENST00000614590 133 ntBASIC-0.87□□□□□ -2.55
CCDC138Q96M89 SNORD114-14-201ENST00000362723 75 ntBASIC-0.88□□□□□ -2.55
CCDC138Q96M89 SNORA62.4-201ENST00000365504 151 ntBASIC-0.88□□□□□ -2.55
CCDC138Q96M89 Y_RNA.403-201ENST00000383977 101 ntBASIC-0.88□□□□□ -2.55
CCDC138Q96M89 RNU6-129P-201ENST00000391022 107 ntBASIC-0.88□□□□□ -2.55
CCDC138Q96M89 RNY4P30-201ENST00000410216 95 ntBASIC-0.88□□□□□ -2.55
CCDC138Q96M89 RNU6-303P-201ENST00000517091 106 ntBASIC-0.88□□□□□ -2.55
CCDC138Q96M89 CYP3A54P-201ENST00000566950 75 ntBASIC-0.88□□□□□ -2.55
CCDC138Q96M89 snoMBII-202.2-201ENST00000517263 86 ntBASIC-0.9□□□□□ -2.55
CCDC138Q96M89 RNY1P1-201ENST00000364372 112 ntBASIC-0.91□□□□□ -2.56
CCDC138Q96M89 SNORD74.6-201ENST00000364796 70 ntBASIC-0.91□□□□□ -2.56
CCDC138Q96M89 MIR1255B2-201ENST00000408618 67 ntBASIC-0.91□□□□□ -2.56
CCDC138Q96M89 Y_RNA.593-201ENST00000410292 98 ntBASIC-0.91□□□□□ -2.56
CCDC138Q96M89 Y_RNA.694-201ENST00000516677 117 ntBASIC-0.91□□□□□ -2.56
CCDC138Q96M89 MIR8068-201ENST00000618032 68 ntBASIC-0.91□□□□□ -2.56
CCDC138Q96M89 Y_RNA.81-201ENST00000362997 102 ntBASIC-0.92□□□□□ -2.56
CCDC138Q96M89 MIRLET7A1-201ENST00000362295 80 ntBASIC-0.93□□□□□ -2.56
CCDC138Q96M89 Y_RNA.442-201ENST00000384131 102 ntBASIC-0.93□□□□□ -2.56
CCDC138Q96M89 MIR496-201ENST00000385226 102 ntBASIC-0.93□□□□□ -2.56
CCDC138Q96M89 RNU6-732P-201ENST00000516033 103 ntBASIC-0.93□□□□□ -2.56
CCDC138Q96M89 AL353803.5-201ENST00000599815 141 ntBASIC-0.93□□□□□ -2.56
CCDC138Q96M89 Y_RNA.426-201ENST00000384068 113 ntBASIC-0.94□□□□□ -2.56
CCDC138Q96M89 RNU6-380P-201ENST00000410207 107 ntBASIC-0.94□□□□□ -2.56
CCDC138Q96M89 Y_RNA.607-201ENST00000410597 98 ntBASIC-0.94□□□□□ -2.56
CCDC138Q96M89 MIR3179-1-201ENST00000578940 84 ntBASIC-0.94□□□□□ -2.56
CCDC138Q96M89 MIR3179-2-201ENST00000579107 84 ntBASIC-0.94□□□□□ -2.56
CCDC138Q96M89 MIR3179-3-201ENST00000579566 84 ntBASIC-0.94□□□□□ -2.56
CCDC138Q96M89 MIR3179-4-201ENST00000617599 84 ntBASIC-0.94□□□□□ -2.56
CCDC138Q96M89 RNU6-478P-201ENST00000363904 110 ntBASIC-0.95□□□□□ -2.56
CCDC138Q96M89 MIR3675-201ENST00000583661 73 ntBASIC-0.95□□□□□ -2.56
CCDC138Q96M89 SNORD22.1-201ENST00000516331 125 ntBASIC-0.96□□□□□ -2.56
CCDC138Q96M89 AC074348.1-201ENST00000426503 132 ntBASIC-0.97□□□□□ -2.56
CCDC138Q96M89 MIR5588-201ENST00000581890 63 ntBASIC-0.98□□□□□ -2.57
CCDC138Q96M89 MIR1297-201ENST00000637311 77 ntBASIC-0.98□□□□□ -2.57
CCDC138Q96M89 Y_RNA.73-201ENST00000362910 113 ntBASIC-0.99□□□□□ -2.57
CCDC138Q96M89 RNU6-119P-201ENST00000364882 107 ntBASIC-0.99□□□□□ -2.57
CCDC138Q96M89 RNU6-226P-201ENST00000363778 107 ntBASIC-1□□□□□ -2.57
CCDC138Q96M89 RNU6-807P-201ENST00000516805 107 ntBASIC-1□□□□□ -2.57
CCDC138Q96M89 RNU6-330P-201ENST00000363015 107 ntBASIC-1.01□□□□□ -2.57
CCDC138Q96M89 SNORA8.1-201ENST00000384250 140 ntBASIC-1.01□□□□□ -2.57
CCDC138Q96M89 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.01□□□□□ -2.57
CCDC138Q96M89 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.01□□□□□ -2.57
CCDC138Q96M89 RNU6-979P-201ENST00000383896 107 ntBASIC-1.02□□□□□ -2.57
CCDC138Q96M89 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.02□□□□□ -2.57
CCDC138Q96M89 RNU6-656P-201ENST00000516785 107 ntBASIC-1.02□□□□□ -2.57
CCDC138Q96M89 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.02□□□□□ -2.57
CCDC138Q96M89 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.03□□□□□ -2.57
CCDC138Q96M89 RNU6-721P-201ENST00000410155 105 ntBASIC-1.03□□□□□ -2.57
CCDC138Q96M89 RNU7-154P-201ENST00000516194 62 ntBASIC-1.03□□□□□ -2.57
CCDC138Q96M89 RNY4-201ENST00000516507 96 ntBASIC-1.03□□□□□ -2.57
CCDC138Q96M89 MIR4306-201ENST00000583390 91 ntBASIC-1.03□□□□□ -2.57
CCDC138Q96M89 MIR4499-201ENST00000584834 69 ntBASIC-1.03□□□□□ -2.57
CCDC138Q96M89 RNU6-315P-201ENST00000362666 107 ntBASIC-1.04□□□□□ -2.58
CCDC138Q96M89 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.04□□□□□ -2.58
CCDC138Q96M89 MIR124-2-201ENST00000385081 109 ntBASIC-1.04□□□□□ -2.58
CCDC138Q96M89 AL021921.1-201ENST00000442774 93 ntBASIC-1.04□□□□□ -2.58
CCDC138Q96M89 AL500527.2-201ENST00000454105 95 ntBASIC-1.04□□□□□ -2.58
CCDC138Q96M89 AC022137.1-201ENST00000483735 151 ntBASIC-1.04□□□□□ -2.58
CCDC138Q96M89 RNU6-645P-201ENST00000364649 106 ntBASIC-1.05□□□□□ -2.58
CCDC138Q96M89 RNU6-294P-201ENST00000364999 102 ntBASIC-1.05□□□□□ -2.58
CCDC138Q96M89 AP000533.3-201ENST00000447704 118 ntBASIC-1.05□□□□□ -2.58
CCDC138Q96M89 SNORD18.2-201ENST00000459604 70 ntBASIC-1.05□□□□□ -2.58
CCDC138Q96M89 MIR4464-201ENST00000580818 92 ntBASIC-1.05□□□□□ -2.58
CCDC138Q96M89 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.06□□□□□ -2.58
CCDC138Q96M89 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.06□□□□□ -2.58
CCDC138Q96M89 MIR519A2-201ENST00000384990 87 ntBASIC-1.06□□□□□ -2.58
CCDC138Q96M89 RNU7-171P-201ENST00000459581 62 ntBASIC-1.06□□□□□ -2.58
CCDC138Q96M89 RNU6-518P-201ENST00000516056 96 ntBASIC-1.06□□□□□ -2.58
CCDC138Q96M89 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.07□□□□□ -2.58
CCDC138Q96M89 MIR450A2-201ENST00000385022 100 ntBASIC-1.07□□□□□ -2.58
CCDC138Q96M89 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.07□□□□□ -2.58
CCDC138Q96M89 RNU6-881P-201ENST00000516813 102 ntBASIC-1.07□□□□□ -2.58
CCDC138Q96M89 AL445584.3-201ENST00000617173 78 ntBASIC-1.07□□□□□ -2.58
CCDC138Q96M89 RNA5SP93-201ENST00000362525 114 ntBASIC-1.08□□□□□ -2.58
CCDC138Q96M89 SNORD45.1-201ENST00000363181 77 ntBASIC-1.08□□□□□ -2.58
CCDC138Q96M89 SNORD114-25-201ENST00000363742 72 ntBASIC-1.08□□□□□ -2.58
CCDC138Q96M89 Y_RNA.316-201ENST00000365118 111 ntBASIC-1.08□□□□□ -2.58
CCDC138Q96M89 MIR4484-201ENST00000582855 83 ntBASIC-1.08□□□□□ -2.58
CCDC138Q96M89 MIR6888-201ENST00000621977 67 ntBASIC-1.08□□□□□ -2.58
CCDC138Q96M89 MIR5582-201ENST00000579697 68 ntBASIC-1.09□□□□□ -2.58
CCDC138Q96M89 uc_338.19-201ENST00000616808 99 ntBASIC-1.09□□□□□ -2.58
CCDC138Q96M89 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.1□□□□□ -2.59
CCDC138Q96M89 Y_RNA.369-201ENST00000365568 117 ntBASIC-1.1□□□□□ -2.59
CCDC138Q96M89 RNU6-242P-201ENST00000384359 107 ntBASIC-1.1□□□□□ -2.59
CCDC138Q96M89 MIR517B-201ENST00000385102 67 ntBASIC-1.1□□□□□ -2.59
CCDC138Q96M89 RNU6-706P-201ENST00000517229 104 ntBASIC-1.1□□□□□ -2.59
CCDC138Q96M89 Y_RNA.421-201ENST00000384052 101 ntBASIC-1.11□□□□□ -2.59
CCDC138Q96M89 RNU6-604P-201ENST00000390917 100 ntBASIC-1.11□□□□□ -2.59
CCDC138Q96M89 MIR494-201ENST00000349529 81 ntBASIC-1.12□□□□□ -2.59
CCDC138Q96M89 RNU6-924P-201ENST00000362926 108 ntBASIC-1.12□□□□□ -2.59
CCDC138Q96M89 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.12□□□□□ -2.59
CCDC138Q96M89 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.12□□□□□ -2.59
CCDC138Q96M89 U2.7-201ENST00000619197 100 ntBASIC-1.12□□□□□ -2.59
CCDC138Q96M89 RNU6-540P-201ENST00000384622 101 ntBASIC-1.13□□□□□ -2.59
CCDC138Q96M89 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-1.13□□□□□ -2.59
CCDC138Q96M89 MIR548C-201ENST00000384815 97 ntBASIC-1.14□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 245 ms