Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 RPL35AP4-201ENST00000412007 102 ntBASIC-2.06□□□□□ -2.74
USP47Q96K76 AC108019.1-201ENST00000512540 175 ntBASIC-2.06□□□□□ -2.74
USP47Q96K76 SNORD115-27-201ENST00000364430 82 ntBASIC-2.07□□□□□ -2.74
USP47Q96K76 MIR519C-201ENST00000385053 87 ntBASIC-2.07□□□□□ -2.74
USP47Q96K76 AL078595.1-201ENST00000404458 226 ntBASIC-2.07□□□□□ -2.74
USP47Q96K76 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-2.07□□□□□ -2.74
USP47Q96K76 RNU6-109P-201ENST00000516364 107 ntBASIC-2.07□□□□□ -2.74
USP47Q96K76 RNU6-184P-201ENST00000516514 107 ntBASIC-2.07□□□□□ -2.74
USP47Q96K76 RNU6-807P-201ENST00000516805 107 ntBASIC-2.07□□□□□ -2.74
USP47Q96K76 Y_RNA.93-201ENST00000363066 109 ntBASIC-2.08□□□□□ -2.74
USP47Q96K76 MIR548C-201ENST00000384815 97 ntBASIC-2.08□□□□□ -2.74
USP47Q96K76 Y_RNA.264-201ENST00000364665 102 ntBASIC-2.09□□□□□ -2.74
USP47Q96K76 MIR4756-201ENST00000577874 78 ntBASIC-2.09□□□□□ -2.74
USP47Q96K76 Y_RNA.204-201ENST00000364112 102 ntBASIC-2.1□□□□□ -2.74
USP47Q96K76 SNORD116-14-201ENST00000383894 92 ntBASIC-2.1□□□□□ -2.74
USP47Q96K76 SNORD116-17-201ENST00000383929 92 ntBASIC-2.1□□□□□ -2.74
USP47Q96K76 SNORD116-15-201ENST00000384445 92 ntBASIC-2.1□□□□□ -2.74
USP47Q96K76 SNORD116-19-201ENST00000384729 92 ntBASIC-2.1□□□□□ -2.74
USP47Q96K76 MIR548Q-201ENST00000408404 100 ntBASIC-2.1□□□□□ -2.74
USP47Q96K76 RNU6-1174P-201ENST00000517278 101 ntBASIC-2.1□□□□□ -2.74
USP47Q96K76 RNU6-645P-201ENST00000364649 106 ntBASIC-2.1□□□□□ -2.75
USP47Q96K76 Y_RNA.502-201ENST00000384478 113 ntBASIC-2.1□□□□□ -2.75
USP47Q96K76 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-2.1□□□□□ -2.75
USP47Q96K76 RNU6-1108P-201ENST00000516308 104 ntBASIC-2.1□□□□□ -2.75
USP47Q96K76 AC099654.10-201ENST00000640395 161 ntBASIC-2.1□□□□□ -2.75
USP47Q96K76 RNU6-774P-201ENST00000363238 107 ntBASIC-2.11□□□□□ -2.75
USP47Q96K76 Y_RNA.818-201ENST00000618813 71 ntBASIC-2.12□□□□□ -2.75
USP47Q96K76 SNORD115-37-201ENST00000363768 82 ntBASIC-2.14□□□□□ -2.75
USP47Q96K76 Y_RNA.403-201ENST00000383977 101 ntBASIC-2.14□□□□□ -2.75
USP47Q96K76 AC090616.4-201ENST00000448026 115 ntBASIC-2.14□□□□□ -2.75
USP47Q96K76 RNU6-118P-201ENST00000516552 102 ntBASIC-2.14□□□□□ -2.75
USP47Q96K76 RNU6-1247P-201ENST00000516622 98 ntBASIC-2.14□□□□□ -2.75
USP47Q96K76 MIR664B-201ENST00000626756 61 ntBASIC-2.14□□□□□ -2.75
USP47Q96K76 Y_RNA.236-201ENST00000364427 111 ntBASIC-2.15□□□□□ -2.75
USP47Q96K76 RNU6-554P-201ENST00000410466 106 ntBASIC-2.15□□□□□ -2.75
USP47Q96K76 RNU6-106P-201ENST00000384405 107 ntBASIC-2.16□□□□□ -2.76
USP47Q96K76 MIR4719-201ENST00000585233 84 ntBASIC-2.17□□□□□ -2.76
USP47Q96K76 Y_RNA.103-201ENST00000363171 102 ntBASIC-2.18□□□□□ -2.76
USP47Q96K76 RNU6-478P-201ENST00000363904 110 ntBASIC-2.19□□□□□ -2.76
USP47Q96K76 RNU6-633P-201ENST00000362612 103 ntBASIC-2.2□□□□□ -2.76
USP47Q96K76 Y_RNA.290-201ENST00000364879 114 ntBASIC-2.2□□□□□ -2.76
USP47Q96K76 RNU6-458P-201ENST00000384179 107 ntBASIC-2.2□□□□□ -2.76
USP47Q96K76 SNORA19-201ENST00000384737 128 ntBASIC-2.2□□□□□ -2.76
USP47Q96K76 U6.58-201ENST00000613107 107 ntBASIC-2.2□□□□□ -2.76
USP47Q96K76 Y_RNA.74-201ENST00000362911 99 ntBASIC-2.21□□□□□ -2.76
USP47Q96K76 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.21□□□□□ -2.76
USP47Q96K76 MIR496-201ENST00000385226 102 ntBASIC-2.21□□□□□ -2.76
USP47Q96K76 RNU6-168P-201ENST00000516189 101 ntBASIC-2.21□□□□□ -2.76
USP47Q96K76 MIR3675-201ENST00000583661 73 ntBASIC-2.21□□□□□ -2.76
USP47Q96K76 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.21□□□□□ -2.76
USP47Q96K76 RNU6-624P-201ENST00000363411 107 ntBASIC-2.22□□□□□ -2.76
USP47Q96K76 Y_RNA.603-201ENST00000410571 108 ntBASIC-2.22□□□□□ -2.76
USP47Q96K76 AC093729.1-201ENST00000513074 128 ntBASIC-2.22□□□□□ -2.76
USP47Q96K76 RNU6-980P-201ENST00000516925 103 ntBASIC-2.22□□□□□ -2.76
USP47Q96K76 MTATP8P2-201ENST00000435212 202 ntBASIC-2.23□□□□□ -2.77
USP47Q96K76 MIR3139-201ENST00000579145 76 ntBASIC-2.23□□□□□ -2.77
USP47Q96K76 Y_RNA.261-201ENST00000364631 102 ntBASIC-2.23□□□□□ -2.77
USP47Q96K76 RNU7-174P-201ENST00000516248 59 ntBASIC-2.23□□□□□ -2.77
USP47Q96K76 MIR4668-201ENST00000582284 70 ntBASIC-2.23□□□□□ -2.77
USP47Q96K76 RNU6-330P-201ENST00000363015 107 ntBASIC-2.24□□□□□ -2.77
USP47Q96K76 RNU6-696P-201ENST00000390834 107 ntBASIC-2.24□□□□□ -2.77
USP47Q96K76 RNU6-1089P-201ENST00000516473 104 ntBASIC-2.24□□□□□ -2.77
USP47Q96K76 AC090425.1-201ENST00000610007 140 ntBASIC-2.24□□□□□ -2.77
USP47Q96K76 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-2.24□□□□□ -2.77
USP47Q96K76 Y_RNA.175-201ENST00000363794 111 ntBASIC-2.25□□□□□ -2.77
USP47Q96K76 Y_RNA.325-201ENST00000365171 122 ntBASIC-2.25□□□□□ -2.77
USP47Q96K76 AC018880.2-201ENST00000414265 201 ntBASIC-2.25□□□□□ -2.77
USP47Q96K76 Y_RNA.544-201ENST00000384650 113 ntBASIC-2.26□□□□□ -2.77
USP47Q96K76 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.26□□□□□ -2.77
USP47Q96K76 RNU6-400P-201ENST00000391173 106 ntBASIC-2.26□□□□□ -2.77
USP47Q96K76 RNU6-1262P-201ENST00000516217 96 ntBASIC-2.26□□□□□ -2.77
USP47Q96K76 Y_RNA.282-201ENST00000364793 102 ntBASIC-2.27□□□□□ -2.77
USP47Q96K76 MIR429-201ENST00000362106 83 ntBASIC-2.28□□□□□ -2.77
USP47Q96K76 RNU6-766P-201ENST00000362478 107 ntBASIC-2.28□□□□□ -2.77
USP47Q96K76 Y_RNA.109-201ENST00000363215 102 ntBASIC-2.28□□□□□ -2.77
USP47Q96K76 RNU6-303P-201ENST00000517091 106 ntBASIC-2.28□□□□□ -2.77
USP47Q96K76 RNA5SP405-201ENST00000363059 114 ntBASIC-2.29□□□□□ -2.78
USP47Q96K76 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.29□□□□□ -2.78
USP47Q96K76 RNU6-587P-201ENST00000391282 106 ntBASIC-2.29□□□□□ -2.78
USP47Q96K76 RNU6-982P-201ENST00000516216 102 ntBASIC-2.29□□□□□ -2.78
USP47Q96K76 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.29□□□□□ -2.78
USP47Q96K76 MIR2052-201ENST00000636055 55 ntBASIC-2.29□□□□□ -2.78
USP47Q96K76 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.29□□□□□ -2.78
USP47Q96K76 SNORD45.1-201ENST00000363181 77 ntBASIC-2.3□□□□□ -2.78
USP47Q96K76 RNU6-604P-201ENST00000390917 100 ntBASIC-2.31□□□□□ -2.78
USP47Q96K76 RNU6-630P-201ENST00000391258 106 ntBASIC-2.31□□□□□ -2.78
USP47Q96K76 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-2.31□□□□□ -2.78
USP47Q96K76 SNORA8.1-201ENST00000384250 140 ntBASIC-2.32□□□□□ -2.78
USP47Q96K76 RNU6-959P-201ENST00000384671 107 ntBASIC-2.32□□□□□ -2.78
USP47Q96K76 MT-TM-201ENST00000387377 68 ntBASIC-2.32□□□□□ -2.78
USP47Q96K76 Y_RNA.620-201ENST00000411009 88 ntBASIC-2.32□□□□□ -2.78
USP47Q96K76 RNU6-557P-201ENST00000516842 110 ntBASIC-2.32□□□□□ -2.78
USP47Q96K76 MIR3133-201ENST00000583157 78 ntBASIC-2.32□□□□□ -2.78
USP47Q96K76 RNU6-79P-201ENST00000362511 107 ntBASIC-2.33□□□□□ -2.78
USP47Q96K76 SNORD116-22-201ENST00000384430 92 ntBASIC-2.33□□□□□ -2.78
USP47Q96K76 AC008267.6-201ENST00000441664 139 ntBASIC-2.33□□□□□ -2.78
USP47Q96K76 RNU6-698P-201ENST00000363523 107 ntBASIC-2.34□□□□□ -2.78
USP47Q96K76 RNU6-194P-201ENST00000363862 105 ntBASIC-2.34□□□□□ -2.78
USP47Q96K76 RNU6-598P-201ENST00000364017 105 ntBASIC-2.34□□□□□ -2.78
USP47Q96K76 RNU6-34P-201ENST00000364874 107 ntBASIC-2.34□□□□□ -2.78
Retrieved 100 of 98,524 protein–RNA pairs in 272.8 ms