Protein–RNA interactions for Protein: Q96DD7

SHISA4, Protein shisa-4, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4Q96DD7 U6.58-201ENST00000613107 107 ntBASIC0.71□□□□□ -2.3
SHISA4Q96DD7 U2.18-201ENST00000622185 84 ntBASIC0.71□□□□□ -2.3
SHISA4Q96DD7 RNU6-502P-201ENST00000362419 108 ntBASIC0.7□□□□□ -2.3
SHISA4Q96DD7 MIRLET7B-201ENST00000385140 83 ntBASIC0.7□□□□□ -2.3
SHISA4Q96DD7 RNA5SP285-201ENST00000516619 119 ntBASIC0.7□□□□□ -2.3
SHISA4Q96DD7 MIR4677-201ENST00000584153 80 ntBASIC0.7□□□□□ -2.3
SHISA4Q96DD7 AC084368.1-201ENST00000620935 65 ntBASIC0.7□□□□□ -2.3
SHISA4Q96DD7 RNU6-986P-201ENST00000363133 102 ntBASIC0.69□□□□□ -2.3
SHISA4Q96DD7 MIR760-201ENST00000390220 80 ntBASIC0.69□□□□□ -2.3
SHISA4Q96DD7 RN7SL660P-201ENST00000614852 299 ntBASIC0.69□□□□□ -2.3
SHISA4Q96DD7 AL627230.5-201ENST00000619807 58 ntBASIC0.69□□□□□ -2.3
SHISA4Q96DD7 RNU7-154P-201ENST00000516194 62 ntBASIC0.68□□□□□ -2.3
SHISA4Q96DD7 RNU6-782P-201ENST00000516852 104 ntBASIC0.68□□□□□ -2.3
SHISA4Q96DD7 RNU7-151P-201ENST00000516930 53 ntBASIC0.68□□□□□ -2.3
SHISA4Q96DD7 MIR6755-201ENST00000619993 66 ntBASIC0.68□□□□□ -2.3
SHISA4Q96DD7 RNU6-1036P-201ENST00000383959 104 ntBASIC0.67□□□□□ -2.3
SHISA4Q96DD7 MIR501-201ENST00000390204 84 ntBASIC0.67□□□□□ -2.3
SHISA4Q96DD7 Y_RNA.698-201ENST00000516798 118 ntBASIC0.67□□□□□ -2.3
SHISA4Q96DD7 RNA5SP128-201ENST00000365305 116 ntBASIC0.66□□□□□ -2.3
SHISA4Q96DD7 MIR3925-201ENST00000584674 77 ntBASIC0.66□□□□□ -2.3
SHISA4Q96DD7 RNU6-974P-201ENST00000384099 108 ntBASIC0.65□□□□□ -2.31
SHISA4Q96DD7 Y_RNA.69-201ENST00000362885 109 ntBASIC0.64□□□□□ -2.31
SHISA4Q96DD7 MIR4514-201ENST00000581410 57 ntBASIC0.64□□□□□ -2.31
SHISA4Q96DD7 AL353803.5-201ENST00000599815 141 ntBASIC0.64□□□□□ -2.31
SHISA4Q96DD7 MIR5087-201ENST00000635826 76 ntBASIC0.64□□□□□ -2.31
SHISA4Q96DD7 SNORD115-23-201ENST00000364461 82 ntBASIC0.63□□□□□ -2.31
SHISA4Q96DD7 RNA5SP63-201ENST00000391225 112 ntBASIC0.63□□□□□ -2.31
SHISA4Q96DD7 RNU6-1262P-201ENST00000516217 96 ntBASIC0.63□□□□□ -2.31
SHISA4Q96DD7 RNU6-1206P-201ENST00000516339 103 ntBASIC0.63□□□□□ -2.31
SHISA4Q96DD7 RNA5SP470-201ENST00000516463 106 ntBASIC0.63□□□□□ -2.31
SHISA4Q96DD7 RNU6-945P-201ENST00000383947 107 ntBASIC0.62□□□□□ -2.31
SHISA4Q96DD7 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.62□□□□□ -2.31
SHISA4Q96DD7 RNU7-129P-201ENST00000516128 62 ntBASIC0.62□□□□□ -2.31
SHISA4Q96DD7 MIR4464-201ENST00000580818 92 ntBASIC0.62□□□□□ -2.31
SHISA4Q96DD7 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.62□□□□□ -2.31
SHISA4Q96DD7 SNORD44.1-201ENST00000363202 61 ntBASIC0.61□□□□□ -2.31
SHISA4Q96DD7 MIR125B1-201ENST00000385236 88 ntBASIC0.61□□□□□ -2.31
SHISA4Q96DD7 RNU6-1250P-201ENST00000391218 107 ntBASIC0.61□□□□□ -2.31
SHISA4Q96DD7 RNU6-1267P-201ENST00000410747 107 ntBASIC0.61□□□□□ -2.31
SHISA4Q96DD7 MIR6888-201ENST00000621977 67 ntBASIC0.61□□□□□ -2.31
SHISA4Q96DD7 MIR499B-201ENST00000636498 73 ntBASIC0.61□□□□□ -2.31
SHISA4Q96DD7 RNU6-247P-201ENST00000362636 107 ntBASIC0.6□□□□□ -2.31
SHISA4Q96DD7 MIR92A1-201ENST00000385233 78 ntBASIC0.6□□□□□ -2.31
SHISA4Q96DD7 SNORA62.5-201ENST00000516634 120 ntBASIC0.6□□□□□ -2.31
SHISA4Q96DD7 MIR876-201ENST00000401147 81 ntBASIC0.59□□□□□ -2.31
SHISA4Q96DD7 U7.5-201ENST00000517224 61 ntBASIC0.59□□□□□ -2.31
SHISA4Q96DD7 MIR4432-201ENST00000581823 84 ntBASIC0.59□□□□□ -2.31
SHISA4Q96DD7 AC023932.2-201ENST00000603176 175 ntBASIC0.59□□□□□ -2.31
SHISA4Q96DD7 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.59□□□□□ -2.32
SHISA4Q96DD7 RNU7-88P-201ENST00000458752 63 ntBASIC0.58□□□□□ -2.32
SHISA4Q96DD7 RNU7-160P-201ENST00000516660 62 ntBASIC0.58□□□□□ -2.32
SHISA4Q96DD7 AP000676.1-201ENST00000533307 52 ntBASIC0.58□□□□□ -2.32
SHISA4Q96DD7 MIR548AL-201ENST00000578416 97 ntBASIC0.58□□□□□ -2.32
SHISA4Q96DD7 AC108676.2-201ENST00000605225 163 ntBASIC0.58□□□□□ -2.32
SHISA4Q96DD7 MIR6759-201ENST00000638110 65 ntBASIC0.58□□□□□ -2.32
SHISA4Q96DD7 MTRNR2L9-201ENST00000622562 75 ntBASIC0.57□□□□□ -2.32
SHISA4Q96DD7 Y_RNA.139-201ENST00000363464 102 ntBASIC0.56□□□□□ -2.32
SHISA4Q96DD7 RNU6-724P-201ENST00000390958 105 ntBASIC0.56□□□□□ -2.32
SHISA4Q96DD7 SCARNA11.2-201ENST00000517183 154 ntBASIC0.56□□□□□ -2.32
SHISA4Q96DD7 RNU6-1174P-201ENST00000517278 101 ntBASIC0.56□□□□□ -2.32
SHISA4Q96DD7 MIR429-201ENST00000362106 83 ntBASIC0.55□□□□□ -2.32
SHISA4Q96DD7 RNU6-1008P-201ENST00000384160 104 ntBASIC0.55□□□□□ -2.32
SHISA4Q96DD7 MIR548AA1-201ENST00000384971 97 ntBASIC0.55□□□□□ -2.32
SHISA4Q96DD7 MIR329-2-201ENST00000385029 84 ntBASIC0.55□□□□□ -2.32
SHISA4Q96DD7 RNU6-696P-201ENST00000390834 107 ntBASIC0.55□□□□□ -2.32
SHISA4Q96DD7 SNORD57-201ENST00000448188 72 ntBASIC0.55□□□□□ -2.32
SHISA4Q96DD7 AL451105.1-201ENST00000450005 189 ntBASIC0.55□□□□□ -2.32
SHISA4Q96DD7 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.55□□□□□ -2.32
SHISA4Q96DD7 AL445584.3-201ENST00000617173 78 ntBASIC0.55□□□□□ -2.32
SHISA4Q96DD7 uc_338.36-201ENST00000622331 158 ntBASIC0.55□□□□□ -2.32
SHISA4Q96DD7 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.55□□□□□ -2.32
SHISA4Q96DD7 MIR106A-201ENST00000384870 81 ntBASIC0.54□□□□□ -2.32
SHISA4Q96DD7 AC114737.2-201ENST00000421583 173 ntBASIC0.54□□□□□ -2.32
SHISA4Q96DD7 RNU6-742P-201ENST00000365289 107 ntBASIC0.53□□□□□ -2.32
SHISA4Q96DD7 MIR29B1-201ENST00000385015 81 ntBASIC0.53□□□□□ -2.32
SHISA4Q96DD7 SNORA68.3-201ENST00000515906 83 ntBASIC0.53□□□□□ -2.32
SHISA4Q96DD7 MIR8068-201ENST00000618032 68 ntBASIC0.53□□□□□ -2.32
SHISA4Q96DD7 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.53□□□□□ -2.33
SHISA4Q96DD7 RNU6-828P-201ENST00000364876 107 ntBASIC0.52□□□□□ -2.33
SHISA4Q96DD7 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.52□□□□□ -2.33
SHISA4Q96DD7 MIR4636-201ENST00000582271 80 ntBASIC0.52□□□□□ -2.33
SHISA4Q96DD7 uc_338.17-201ENST00000619633 179 ntBASIC0.52□□□□□ -2.33
SHISA4Q96DD7 MIR103A1-201ENST00000362165 78 ntBASIC0.51□□□□□ -2.33
SHISA4Q96DD7 MIRLET7D-201ENST00000362263 87 ntBASIC0.51□□□□□ -2.33
SHISA4Q96DD7 RNU6-258P-201ENST00000390884 101 ntBASIC0.51□□□□□ -2.33
SHISA4Q96DD7 MIR548H4-201ENST00000408689 111 ntBASIC0.51□□□□□ -2.33
SHISA4Q96DD7 RNA5SP98-201ENST00000363158 137 ntBASIC0.5□□□□□ -2.33
SHISA4Q96DD7 RNU7-55P-201ENST00000459426 62 ntBASIC0.5□□□□□ -2.33
SHISA4Q96DD7 MIR3170-201ENST00000582699 77 ntBASIC0.5□□□□□ -2.33
SHISA4Q96DD7 MIR5704-201ENST00000584029 77 ntBASIC0.5□□□□□ -2.33
SHISA4Q96DD7 RNU6-995P-201ENST00000391244 107 ntBASIC0.49□□□□□ -2.33
SHISA4Q96DD7 AC108740.1-201ENST00000498629 225 ntBASIC0.49□□□□□ -2.33
SHISA4Q96DD7 MIR6718-201ENST00000616153 80 ntBASIC0.49□□□□□ -2.33
SHISA4Q96DD7 RNU6-127P-201ENST00000390897 107 ntBASIC0.48□□□□□ -2.33
SHISA4Q96DD7 MIR548H2-201ENST00000408874 88 ntBASIC0.48□□□□□ -2.33
SHISA4Q96DD7 SNORD63.2-201ENST00000516303 64 ntBASIC0.48□□□□□ -2.33
SHISA4Q96DD7 AL391099.1-201ENST00000624635 187 ntBASIC0.48□□□□□ -2.33
SHISA4Q96DD7 snoR1.1-201ENST00000628177 80 ntBASIC0.48□□□□□ -2.33
SHISA4Q96DD7 RNU6-815P-201ENST00000384080 113 ntBASIC0.47□□□□□ -2.33
SHISA4Q96DD7 MIR520D-201ENST00000385002 87 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 413.8 ms