Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 RNA5SP347-201ENST00000362445 119 ntBASIC0.82□□□□□ -2.28
HLA-CQ95604 RNU6-753P-201ENST00000363926 107 ntBASIC0.82□□□□□ -2.28
HLA-CQ95604 RNU7-160P-201ENST00000516660 62 ntBASIC0.82□□□□□ -2.28
HLA-CQ95604 RNU4-33P-201ENST00000364316 85 ntBASIC0.81□□□□□ -2.28
HLA-CQ95604 snoR1.1-201ENST00000628177 80 ntBASIC0.81□□□□□ -2.28
HLA-CQ95604 MIR6866-201ENST00000638146 69 ntBASIC0.81□□□□□ -2.28
HLA-CQ95604 RNU6-35P-201ENST00000384530 107 ntBASIC0.8□□□□□ -2.28
HLA-CQ95604 RNU4-88P-201ENST00000411220 86 ntBASIC0.8□□□□□ -2.28
HLA-CQ95604 RNU6-810P-201ENST00000364001 107 ntBASIC0.79□□□□□ -2.28
HLA-CQ95604 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
HLA-CQ95604 AC108740.1-201ENST00000498629 225 ntBASIC0.79□□□□□ -2.28
HLA-CQ95604 AP000676.1-201ENST00000533307 52 ntBASIC0.79□□□□□ -2.28
HLA-CQ95604 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.78□□□□□ -2.28
HLA-CQ95604 MIR4432-201ENST00000581823 84 ntBASIC0.78□□□□□ -2.28
HLA-CQ95604 SNORD114-2-201ENST00000363953 78 ntBASIC0.77□□□□□ -2.29
HLA-CQ95604 SNORA62.4-201ENST00000365504 151 ntBASIC0.77□□□□□ -2.29
HLA-CQ95604 RNU6-351P-201ENST00000516097 100 ntBASIC0.77□□□□□ -2.29
HLA-CQ95604 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.76□□□□□ -2.29
HLA-CQ95604 AC108676.2-201ENST00000605225 163 ntBASIC0.76□□□□□ -2.29
HLA-CQ95604 MIR146A-201ENST00000385201 99 ntBASIC0.75□□□□□ -2.29
HLA-CQ95604 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.74□□□□□ -2.29
HLA-CQ95604 MIRLET7D-201ENST00000362263 87 ntBASIC0.73□□□□□ -2.29
HLA-CQ95604 RNU6-127P-201ENST00000390897 107 ntBASIC0.73□□□□□ -2.29
HLA-CQ95604 RNU7-55P-201ENST00000459426 62 ntBASIC0.73□□□□□ -2.29
HLA-CQ95604 SNORA68.3-201ENST00000515906 83 ntBASIC0.73□□□□□ -2.29
HLA-CQ95604 MIR892B-201ENST00000401279 77 ntBASIC0.72□□□□□ -2.29
HLA-CQ95604 RNU6-419P-201ENST00000517030 63 ntBASIC0.72□□□□□ -2.29
HLA-CQ95604 CR383656.4-201ENST00000546909 122 ntBASIC0.72□□□□□ -2.29
HLA-CQ95604 MIR5087-201ENST00000635826 76 ntBASIC0.72□□□□□ -2.29
HLA-CQ95604 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
HLA-CQ95604 AC090625.1-201ENST00000357130 210 ntBASIC0.71□□□□□ -2.3
HLA-CQ95604 MIR148A-201ENST00000362215 68 ntBASIC0.71□□□□□ -2.3
HLA-CQ95604 RNU6-973P-201ENST00000364690 107 ntBASIC0.71□□□□□ -2.3
HLA-CQ95604 RNU6-696P-201ENST00000390834 107 ntBASIC0.71□□□□□ -2.3
HLA-CQ95604 RNU6-900P-201ENST00000384498 102 ntBASIC0.7□□□□□ -2.3
HLA-CQ95604 MIR2909-201ENST00000617113 69 ntBASIC0.7□□□□□ -2.3
HLA-CQ95604 MIR103A1-201ENST00000362165 78 ntBASIC0.69□□□□□ -2.3
HLA-CQ95604 RNU6-598P-201ENST00000364017 105 ntBASIC0.69□□□□□ -2.3
HLA-CQ95604 MIR548AA1-201ENST00000384971 97 ntBASIC0.69□□□□□ -2.3
HLA-CQ95604 RNU6-1133P-201ENST00000410963 100 ntBASIC0.69□□□□□ -2.3
HLA-CQ95604 MIR4490-201ENST00000582647 84 ntBASIC0.69□□□□□ -2.3
HLA-CQ95604 AL391099.1-201ENST00000624635 187 ntBASIC0.69□□□□□ -2.3
HLA-CQ95604 DLEU2_4.2-201ENST00000616613 58 ntBASIC0.68□□□□□ -2.3
HLA-CQ95604 MIR6086-201ENST00000638065 55 ntBASIC0.68□□□□□ -2.3
HLA-CQ95604 RNU6-995P-201ENST00000391244 107 ntBASIC0.67□□□□□ -2.3
HLA-CQ95604 RNU6-1206P-201ENST00000516339 103 ntBASIC0.67□□□□□ -2.3
HLA-CQ95604 Y_RNA.698-201ENST00000516798 118 ntBASIC0.67□□□□□ -2.3
HLA-CQ95604 AC069113.3-201ENST00000521019 150 ntBASIC0.67□□□□□ -2.3
HLA-CQ95604 MIR4743-201ENST00000584576 69 ntBASIC0.67□□□□□ -2.3
HLA-CQ95604 AC096531.1-201ENST00000419107 107 ntBASIC0.66□□□□□ -2.3
HLA-CQ95604 RNU6-930P-201ENST00000390938 100 ntBASIC0.65□□□□□ -2.31
HLA-CQ95604 RNU6-1262P-201ENST00000516217 96 ntBASIC0.65□□□□□ -2.31
HLA-CQ95604 RNU7-151P-201ENST00000516930 53 ntBASIC0.65□□□□□ -2.31
HLA-CQ95604 MIR6514-201ENST00000622549 70 ntBASIC0.65□□□□□ -2.31
HLA-CQ95604 RNU6-1327P-201ENST00000365302 105 ntBASIC0.64□□□□□ -2.31
HLA-CQ95604 RNU6-815P-201ENST00000384080 113 ntBASIC0.64□□□□□ -2.31
HLA-CQ95604 RNU6-180P-201ENST00000516697 61 ntBASIC0.64□□□□□ -2.31
HLA-CQ95604 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
HLA-CQ95604 RNA5SP499-201ENST00000363982 119 ntBASIC0.63□□□□□ -2.31
HLA-CQ95604 RNA5SP285-201ENST00000516619 119 ntBASIC0.63□□□□□ -2.31
HLA-CQ95604 SNORA62.5-201ENST00000516634 120 ntBASIC0.63□□□□□ -2.31
HLA-CQ95604 AL445584.3-201ENST00000617173 78 ntBASIC0.63□□□□□ -2.31
HLA-CQ95604 Y_RNA.69-201ENST00000362885 109 ntBASIC0.62□□□□□ -2.31
HLA-CQ95604 MIR4464-201ENST00000580818 92 ntBASIC0.62□□□□□ -2.31
HLA-CQ95604 U2.18-201ENST00000622185 84 ntBASIC0.62□□□□□ -2.31
HLA-CQ95604 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.61□□□□□ -2.31
HLA-CQ95604 RNU6-828P-201ENST00000364876 107 ntBASIC0.61□□□□□ -2.31
HLA-CQ95604 SNORD57-201ENST00000448188 72 ntBASIC0.61□□□□□ -2.31
HLA-CQ95604 MIR6888-201ENST00000621977 67 ntBASIC0.61□□□□□ -2.31
HLA-CQ95604 RNU6-838P-201ENST00000363399 108 ntBASIC0.6□□□□□ -2.31
HLA-CQ95604 MIR125B1-201ENST00000385236 88 ntBASIC0.6□□□□□ -2.31
HLA-CQ95604 MIR4315-1-201ENST00000636800 73 ntBASIC0.6□□□□□ -2.31
HLA-CQ95604 MIR4315-2-201ENST00000640925 73 ntBASIC0.6□□□□□ -2.31
HLA-CQ95604 VTRNA1-3-201ENST00000365645 89 ntBASIC0.59□□□□□ -2.31
HLA-CQ95604 MIR4514-201ENST00000581410 57 ntBASIC0.59□□□□□ -2.31
HLA-CQ95604 RNU6-924P-201ENST00000362926 108 ntBASIC0.58□□□□□ -2.32
HLA-CQ95604 RNA5SP63-201ENST00000391225 112 ntBASIC0.58□□□□□ -2.32
HLA-CQ95604 Y_RNA.613-201ENST00000410726 97 ntBASIC0.58□□□□□ -2.32
HLA-CQ95604 RNU6-247P-201ENST00000362636 107 ntBASIC0.57□□□□□ -2.32
HLA-CQ95604 RNU6-455P-201ENST00000384681 107 ntBASIC0.57□□□□□ -2.32
HLA-CQ95604 MIR329-2-201ENST00000385029 84 ntBASIC0.57□□□□□ -2.32
HLA-CQ95604 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.57□□□□□ -2.32
HLA-CQ95604 MIR610-201ENST00000385139 96 ntBASIC0.56□□□□□ -2.32
HLA-CQ95604 MIR579-201ENST00000385221 98 ntBASIC0.56□□□□□ -2.32
HLA-CQ95604 MIR643-201ENST00000385267 97 ntBASIC0.56□□□□□ -2.32
HLA-CQ95604 MIR548F3-201ENST00000408509 87 ntBASIC0.56□□□□□ -2.32
HLA-CQ95604 RNA5SP163-201ENST00000410304 99 ntBASIC0.56□□□□□ -2.32
HLA-CQ95604 AC114737.2-201ENST00000421583 173 ntBASIC0.56□□□□□ -2.32
HLA-CQ95604 SNORD63.1-201ENST00000516178 80 ntBASIC0.56□□□□□ -2.32
HLA-CQ95604 U7.5-201ENST00000517224 61 ntBASIC0.56□□□□□ -2.32
HLA-CQ95604 MIR548H2-201ENST00000408874 88 ntBASIC0.55□□□□□ -2.32
HLA-CQ95604 RNU6-1174P-201ENST00000517278 101 ntBASIC0.54□□□□□ -2.32
HLA-CQ95604 AC104408.1-201ENST00000605241 170 ntBASIC0.54□□□□□ -2.32
HLA-CQ95604 MIR6507-201ENST00000613630 70 ntBASIC0.54□□□□□ -2.32
HLA-CQ95604 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.53□□□□□ -2.32
HLA-CQ95604 AC023932.2-201ENST00000603176 175 ntBASIC0.53□□□□□ -2.32
HLA-CQ95604 uc_338.36-201ENST00000622331 158 ntBASIC0.53□□□□□ -2.32
HLA-CQ95604 SNORD45.2-201ENST00000363552 72 ntBASIC0.52□□□□□ -2.33
HLA-CQ95604 AL451105.1-201ENST00000450005 189 ntBASIC0.52□□□□□ -2.33
HLA-CQ95604 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 201.6 ms