Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1.37□□□□□ -2.19
TRIM41Q8WV44 MIR501-201ENST00000390204 84 ntBASIC1.36□□□□□ -2.19
TRIM41Q8WV44 RNU6-175P-201ENST00000516896 107 ntBASIC1.36□□□□□ -2.19
TRIM41Q8WV44 RNU6-351P-201ENST00000516097 100 ntBASIC1.35□□□□□ -2.19
TRIM41Q8WV44 MIR7110-201ENST00000612638 86 ntBASIC1.34□□□□□ -2.19
TRIM41Q8WV44 U4.2-201ENST00000618561 85 ntBASIC1.34□□□□□ -2.19
TRIM41Q8WV44 MIR6755-201ENST00000619993 66 ntBASIC1.34□□□□□ -2.19
TRIM41Q8WV44 SNORD114-2-201ENST00000363953 78 ntBASIC1.33□□□□□ -2.2
TRIM41Q8WV44 RNU6-782P-201ENST00000516852 104 ntBASIC1.33□□□□□ -2.2
TRIM41Q8WV44 Y_RNA.185-201ENST00000363894 100 ntBASIC1.32□□□□□ -2.2
TRIM41Q8WV44 PSMC1P5-201ENST00000512850 177 ntBASIC1.32□□□□□ -2.2
TRIM41Q8WV44 MIR548AG1-201ENST00000579932 66 ntBASIC1.32□□□□□ -2.2
TRIM41Q8WV44 DLEU2_4.2-201ENST00000616613 58 ntBASIC1.32□□□□□ -2.2
TRIM41Q8WV44 RNU7-154P-201ENST00000516194 62 ntBASIC1.31□□□□□ -2.2
TRIM41Q8WV44 RNA5SP470-201ENST00000516463 106 ntBASIC1.31□□□□□ -2.2
TRIM41Q8WV44 MIR499B-201ENST00000636498 73 ntBASIC1.31□□□□□ -2.2
TRIM41Q8WV44 RNU6-246P-201ENST00000384702 107 ntBASIC1.3□□□□□ -2.2
TRIM41Q8WV44 MIRLET7B-201ENST00000385140 83 ntBASIC1.3□□□□□ -2.2
TRIM41Q8WV44 RNU6-863P-201ENST00000515989 104 ntBASIC1.3□□□□□ -2.2
TRIM41Q8WV44 SNORA40.16-201ENST00000517238 121 ntBASIC1.3□□□□□ -2.2
TRIM41Q8WV44 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC1.3□□□□□ -2.2
TRIM41Q8WV44 MIR429-201ENST00000362106 83 ntBASIC1.27□□□□□ -2.21
TRIM41Q8WV44 Y_RNA.109-201ENST00000363215 102 ntBASIC1.27□□□□□ -2.21
TRIM41Q8WV44 RNU4-33P-201ENST00000364316 85 ntBASIC1.27□□□□□ -2.21
TRIM41Q8WV44 RN7SL660P-201ENST00000614852 299 ntBASIC1.27□□□□□ -2.21
TRIM41Q8WV44 RNA5SP128-201ENST00000365305 116 ntBASIC1.26□□□□□ -2.21
TRIM41Q8WV44 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
TRIM41Q8WV44 RNU6ATAC31P-201ENST00000408513 126 ntBASIC1.26□□□□□ -2.21
TRIM41Q8WV44 RNU6-172P-201ENST00000411000 93 ntBASIC1.26□□□□□ -2.21
TRIM41Q8WV44 AP000676.1-201ENST00000533307 52 ntBASIC1.26□□□□□ -2.21
TRIM41Q8WV44 RNU6-502P-201ENST00000362419 108 ntBASIC1.25□□□□□ -2.21
TRIM41Q8WV44 RNU6-930P-201ENST00000390938 100 ntBASIC1.25□□□□□ -2.21
TRIM41Q8WV44 MIR5087-201ENST00000635826 76 ntBASIC1.25□□□□□ -2.21
TRIM41Q8WV44 AC104692.1-201ENST00000472406 90 ntBASIC1.24□□□□□ -2.21
TRIM41Q8WV44 RNU6-810P-201ENST00000364001 107 ntBASIC1.23□□□□□ -2.21
TRIM41Q8WV44 RNU6-458P-201ENST00000384179 107 ntBASIC1.23□□□□□ -2.21
TRIM41Q8WV44 MIR548F3-201ENST00000408509 87 ntBASIC1.23□□□□□ -2.21
TRIM41Q8WV44 U6.58-201ENST00000613107 107 ntBASIC1.23□□□□□ -2.21
TRIM41Q8WV44 SNORD1B-201ENST00000363091 84 ntBASIC1.22□□□□□ -2.21
TRIM41Q8WV44 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC1.22□□□□□ -2.21
TRIM41Q8WV44 AC108676.2-201ENST00000605225 163 ntBASIC1.22□□□□□ -2.21
TRIM41Q8WV44 RNA5SP499-201ENST00000363982 119 ntBASIC1.21□□□□□ -2.22
TRIM41Q8WV44 MIR3925-201ENST00000584674 77 ntBASIC1.21□□□□□ -2.22
TRIM41Q8WV44 MIR6866-201ENST00000638146 69 ntBASIC1.21□□□□□ -2.22
TRIM41Q8WV44 Y_RNA.610-201ENST00000410681 103 ntBASIC1.2□□□□□ -2.22
TRIM41Q8WV44 RNY1P9-201ENST00000532431 109 ntBASIC1.2□□□□□ -2.22
TRIM41Q8WV44 MIR548X-201ENST00000580069 75 ntBASIC1.2□□□□□ -2.22
TRIM41Q8WV44 RNA5SP134-201ENST00000516492 96 ntBASIC1.19□□□□□ -2.22
TRIM41Q8WV44 SCARNA11.2-201ENST00000517183 154 ntBASIC1.19□□□□□ -2.22
TRIM41Q8WV44 AC023932.2-201ENST00000603176 175 ntBASIC1.19□□□□□ -2.22
TRIM41Q8WV44 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC1.19□□□□□ -2.22
TRIM41Q8WV44 AL353803.5-201ENST00000599815 141 ntBASIC1.18□□□□□ -2.22
TRIM41Q8WV44 MIR604-201ENST00000384880 94 ntBASIC1.17□□□□□ -2.22
TRIM41Q8WV44 SNORA40B-201ENST00000385573 128 ntBASIC1.17□□□□□ -2.22
TRIM41Q8WV44 RPL39P28-201ENST00000465655 155 ntBASIC1.17□□□□□ -2.22
TRIM41Q8WV44 snoR1.1-201ENST00000628177 80 ntBASIC1.17□□□□□ -2.22
TRIM41Q8WV44 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
TRIM41Q8WV44 RNU6-945P-201ENST00000383947 107 ntBASIC1.16□□□□□ -2.22
TRIM41Q8WV44 MIR545-201ENST00000385085 106 ntBASIC1.16□□□□□ -2.22
TRIM41Q8WV44 MIR601-201ENST00000385256 79 ntBASIC1.16□□□□□ -2.22
TRIM41Q8WV44 MIR4490-201ENST00000582647 84 ntBASIC1.16□□□□□ -2.22
TRIM41Q8WV44 MIR146A-201ENST00000385201 99 ntBASIC1.15□□□□□ -2.23
TRIM41Q8WV44 SNORD95.1-201ENST00000364099 68 ntBASIC1.13□□□□□ -2.23
TRIM41Q8WV44 MIR4493-201ENST00000584016 73 ntBASIC1.13□□□□□ -2.23
TRIM41Q8WV44 MIR579-201ENST00000385221 98 ntBASIC1.12□□□□□ -2.23
TRIM41Q8WV44 MIR876-201ENST00000401147 81 ntBASIC1.12□□□□□ -2.23
TRIM41Q8WV44 Y_RNA.413-201ENST00000384007 102 ntBASIC1.11□□□□□ -2.23
TRIM41Q8WV44 Y_RNA.754-201ENST00000476024 102 ntBASIC1.11□□□□□ -2.23
TRIM41Q8WV44 Y_RNA.790-201ENST00000614282 102 ntBASIC1.11□□□□□ -2.23
TRIM41Q8WV44 Y_RNA.782-201ENST00000614695 102 ntBASIC1.11□□□□□ -2.23
TRIM41Q8WV44 RNU6-924P-201ENST00000362926 108 ntBASIC1.1□□□□□ -2.23
TRIM41Q8WV44 MIR4432-201ENST00000581823 84 ntBASIC1.1□□□□□ -2.23
TRIM41Q8WV44 SNORD44.1-201ENST00000363202 61 ntBASIC1.09□□□□□ -2.23
TRIM41Q8WV44 RNU6-838P-201ENST00000363399 108 ntBASIC1.09□□□□□ -2.23
TRIM41Q8WV44 uc_338.36-201ENST00000622331 158 ntBASIC1.09□□□□□ -2.23
TRIM41Q8WV44 RNU6-419P-201ENST00000517030 63 ntBASIC1.07□□□□□ -2.24
TRIM41Q8WV44 U2.18-201ENST00000622185 84 ntBASIC1.07□□□□□ -2.24
TRIM41Q8WV44 RNU6-598P-201ENST00000364017 105 ntBASIC1.05□□□□□ -2.24
TRIM41Q8WV44 MIR103A1-201ENST00000362165 78 ntBASIC1.04□□□□□ -2.24
TRIM41Q8WV44 RNU6-986P-201ENST00000363133 102 ntBASIC1.03□□□□□ -2.24
TRIM41Q8WV44 AC108740.1-201ENST00000498629 225 ntBASIC1.03□□□□□ -2.24
TRIM41Q8WV44 SNORA68.3-201ENST00000515906 83 ntBASIC1.03□□□□□ -2.24
TRIM41Q8WV44 RNU6-1133P-201ENST00000410963 100 ntBASIC1.02□□□□□ -2.25
TRIM41Q8WV44 RNU7-151P-201ENST00000516930 53 ntBASIC1.02□□□□□ -2.25
TRIM41Q8WV44 MIR198-201ENST00000637333 62 ntBASIC1.02□□□□□ -2.25
TRIM41Q8WV44 SNORD115-23-201ENST00000364461 82 ntBASIC1.01□□□□□ -2.25
TRIM41Q8WV44 MIR106A-201ENST00000384870 81 ntBASIC1.01□□□□□ -2.25
TRIM41Q8WV44 MIR643-201ENST00000385267 97 ntBASIC1.01□□□□□ -2.25
TRIM41Q8WV44 AP001180.6-201ENST00000584918 159 ntBASIC1.01□□□□□ -2.25
TRIM41Q8WV44 RNU6-127P-201ENST00000390897 107 ntBASIC0.99□□□□□ -2.25
TRIM41Q8WV44 Y_RNA.69-201ENST00000362885 109 ntBASIC0.98□□□□□ -2.25
TRIM41Q8WV44 RNU6-247P-201ENST00000362636 107 ntBASIC0.97□□□□□ -2.25
TRIM41Q8WV44 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.97□□□□□ -2.25
TRIM41Q8WV44 RNU7-88P-201ENST00000458752 63 ntBASIC0.97□□□□□ -2.25
TRIM41Q8WV44 RNU6-1206P-201ENST00000516339 103 ntBASIC0.97□□□□□ -2.25
TRIM41Q8WV44 uc_338.17-201ENST00000619633 179 ntBASIC0.97□□□□□ -2.25
TRIM41Q8WV44 RNU6-815P-201ENST00000384080 113 ntBASIC0.95□□□□□ -2.26
TRIM41Q8WV44 RNU6-995P-201ENST00000391244 107 ntBASIC0.95□□□□□ -2.26
TRIM41Q8WV44 Y_RNA.698-201ENST00000516798 118 ntBASIC0.95□□□□□ -2.26
TRIM41Q8WV44 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 8.3 ms