Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.32□□□□□ -2.62
PRPF39Q86UA1 MIR488-201ENST00000365739 83 ntBASIC-1.32□□□□□ -2.62
PRPF39Q86UA1 SNORD116-22-201ENST00000384430 92 ntBASIC-1.32□□□□□ -2.62
PRPF39Q86UA1 RNU6-1154P-201ENST00000391001 104 ntBASIC-1.32□□□□□ -2.62
PRPF39Q86UA1 RNY4P18-201ENST00000391107 89 ntBASIC-1.32□□□□□ -2.62
PRPF39Q86UA1 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.32□□□□□ -2.62
PRPF39Q86UA1 AC132825.6-201ENST00000638861 357 ntBASIC-1.32□□□□□ -2.62
PRPF39Q86UA1 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.33□□□□□ -2.62
PRPF39Q86UA1 MIR548M-201ENST00000408260 86 ntBASIC-1.33□□□□□ -2.62
PRPF39Q86UA1 MIR4484-201ENST00000582855 83 ntBASIC-1.33□□□□□ -2.62
PRPF39Q86UA1 RNU6-834P-201ENST00000362367 110 ntBASIC-1.34□□□□□ -2.62
PRPF39Q86UA1 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.34□□□□□ -2.62
PRPF39Q86UA1 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.34□□□□□ -2.62
PRPF39Q86UA1 RNU6-458P-201ENST00000384179 107 ntBASIC-1.34□□□□□ -2.62
PRPF39Q86UA1 RNU6-24P-201ENST00000384440 107 ntBASIC-1.34□□□□□ -2.62
PRPF39Q86UA1 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.34□□□□□ -2.62
PRPF39Q86UA1 MIR889-201ENST00000401280 79 ntBASIC-1.34□□□□□ -2.62
PRPF39Q86UA1 MIR548Q-201ENST00000408404 100 ntBASIC-1.34□□□□□ -2.62
PRPF39Q86UA1 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.34□□□□□ -2.62
PRPF39Q86UA1 RNU6-303P-201ENST00000517091 106 ntBASIC-1.34□□□□□ -2.62
PRPF39Q86UA1 MIR4306-201ENST00000583390 91 ntBASIC-1.34□□□□□ -2.62
PRPF39Q86UA1 U6.58-201ENST00000613107 107 ntBASIC-1.34□□□□□ -2.62
PRPF39Q86UA1 MIR6874-201ENST00000635894 71 ntBASIC-1.34□□□□□ -2.62
PRPF39Q86UA1 MIR2052-201ENST00000636055 55 ntBASIC-1.34□□□□□ -2.62
PRPF39Q86UA1 SNORD45.1-201ENST00000363181 77 ntBASIC-1.35□□□□□ -2.63
PRPF39Q86UA1 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.35□□□□□ -2.63
PRPF39Q86UA1 RNU6-1117P-201ENST00000384525 104 ntBASIC-1.35□□□□□ -2.63
PRPF39Q86UA1 RNU6-576P-201ENST00000390854 102 ntBASIC-1.35□□□□□ -2.63
PRPF39Q86UA1 AC074348.1-201ENST00000426503 132 ntBASIC-1.35□□□□□ -2.63
PRPF39Q86UA1 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.35□□□□□ -2.63
PRPF39Q86UA1 RNU6-557P-201ENST00000516842 110 ntBASIC-1.35□□□□□ -2.63
PRPF39Q86UA1 RNU6-686P-201ENST00000364839 107 ntBASIC-1.36□□□□□ -2.63
PRPF39Q86UA1 MIR527-201ENST00000385244 85 ntBASIC-1.36□□□□□ -2.63
PRPF39Q86UA1 SNORA40.13-201ENST00000516379 120 ntBASIC-1.36□□□□□ -2.63
PRPF39Q86UA1 MIR4324-201ENST00000584846 72 ntBASIC-1.36□□□□□ -2.63
PRPF39Q86UA1 AC091912.2-201ENST00000624798 167 ntBASIC-1.36□□□□□ -2.63
PRPF39Q86UA1 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.37□□□□□ -2.63
PRPF39Q86UA1 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.37□□□□□ -2.63
PRPF39Q86UA1 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.37□□□□□ -2.63
PRPF39Q86UA1 AC090616.4-201ENST00000448026 115 ntBASIC-1.37□□□□□ -2.63
PRPF39Q86UA1 U4.4-201ENST00000620626 117 ntBASIC-1.37□□□□□ -2.63
PRPF39Q86UA1 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.38□□□□□ -2.63
PRPF39Q86UA1 RNU6-640P-201ENST00000363693 105 ntBASIC-1.38□□□□□ -2.63
PRPF39Q86UA1 RNU6-587P-201ENST00000391282 106 ntBASIC-1.38□□□□□ -2.63
PRPF39Q86UA1 MIR4490-201ENST00000582647 84 ntBASIC-1.38□□□□□ -2.63
PRPF39Q86UA1 SNORA63.4-201ENST00000362763 126 ntBASIC-1.39□□□□□ -2.63
PRPF39Q86UA1 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.39□□□□□ -2.63
PRPF39Q86UA1 SNX3P1X-201ENST00000414887 175 ntBASIC-1.39□□□□□ -2.63
PRPF39Q86UA1 RNU6-313P-201ENST00000516317 112 ntBASIC-1.39□□□□□ -2.63
PRPF39Q86UA1 MIR548V-201ENST00000584165 80 ntBASIC-1.39□□□□□ -2.63
PRPF39Q86UA1 MIR6738-201ENST00000619620 64 ntBASIC-1.39□□□□□ -2.63
PRPF39Q86UA1 RNU6-598P-201ENST00000364017 105 ntBASIC-1.4□□□□□ -2.63
PRPF39Q86UA1 RNU6-164P-201ENST00000364604 103 ntBASIC-1.4□□□□□ -2.63
PRPF39Q86UA1 RNU6-129P-201ENST00000391022 107 ntBASIC-1.4□□□□□ -2.63
PRPF39Q86UA1 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.4□□□□□ -2.63
PRPF39Q86UA1 MIR664A-201ENST00000626086 82 ntBASIC-1.4□□□□□ -2.63
PRPF39Q86UA1 MIR3910-1-201ENST00000580936 111 ntBASIC-1.42□□□□□ -2.64
PRPF39Q86UA1 U2.18-201ENST00000622185 84 ntBASIC-1.42□□□□□ -2.64
PRPF39Q86UA1 RNU6-10P-201ENST00000384036 107 ntBASIC-1.43□□□□□ -2.64
PRPF39Q86UA1 MIR630-201ENST00000384957 97 ntBASIC-1.43□□□□□ -2.64
PRPF39Q86UA1 MIR520D-201ENST00000385002 87 ntBASIC-1.43□□□□□ -2.64
PRPF39Q86UA1 RNU6-696P-201ENST00000390834 107 ntBASIC-1.43□□□□□ -2.64
PRPF39Q86UA1 AC006160.2-201ENST00000637708 154 ntBASIC-1.43□□□□□ -2.64
PRPF39Q86UA1 Y_RNA.73-201ENST00000362910 113 ntBASIC-1.44□□□□□ -2.64
PRPF39Q86UA1 Y_RNA.273-201ENST00000364703 102 ntBASIC-1.44□□□□□ -2.64
PRPF39Q86UA1 RNU6-675P-201ENST00000384236 104 ntBASIC-1.44□□□□□ -2.64
PRPF39Q86UA1 RNU6-630P-201ENST00000391258 106 ntBASIC-1.44□□□□□ -2.64
PRPF39Q86UA1 RNU6-698P-201ENST00000363523 107 ntBASIC-1.45□□□□□ -2.64
PRPF39Q86UA1 RNU6-34P-201ENST00000364874 107 ntBASIC-1.45□□□□□ -2.64
PRPF39Q86UA1 RNU6-608P-201ENST00000383927 104 ntBASIC-1.45□□□□□ -2.64
PRPF39Q86UA1 RNU6-147P-201ENST00000383983 107 ntBASIC-1.45□□□□□ -2.64
PRPF39Q86UA1 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.45□□□□□ -2.64
PRPF39Q86UA1 RNU6-844P-201ENST00000517175 102 ntBASIC-1.45□□□□□ -2.64
PRPF39Q86UA1 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.45□□□□□ -2.64
PRPF39Q86UA1 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.46□□□□□ -2.64
PRPF39Q86UA1 RNU6-755P-201ENST00000364400 103 ntBASIC-1.46□□□□□ -2.64
PRPF39Q86UA1 SNORD45A-201ENST00000384512 84 ntBASIC-1.46□□□□□ -2.64
PRPF39Q86UA1 RNU6-706P-201ENST00000517229 104 ntBASIC-1.46□□□□□ -2.64
PRPF39Q86UA1 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.47□□□□□ -2.64
PRPF39Q86UA1 Y_RNA.593-201ENST00000410292 98 ntBASIC-1.47□□□□□ -2.64
PRPF39Q86UA1 RNU6-168P-201ENST00000516189 101 ntBASIC-1.47□□□□□ -2.64
PRPF39Q86UA1 MIR4520-1-201ENST00000582609 70 ntBASIC-1.47□□□□□ -2.64
PRPF39Q86UA1 MIR4320-201ENST00000636981 65 ntBASIC-1.47□□□□□ -2.64
PRPF39Q86UA1 SNORD113.1-201ENST00000363280 73 ntBASIC-1.48□□□□□ -2.65
PRPF39Q86UA1 SNORD113-2-201ENST00000391082 72 ntBASIC-1.48□□□□□ -2.65
PRPF39Q86UA1 MIR6502-201ENST00000617296 76 ntBASIC-1.48□□□□□ -2.65
PRPF39Q86UA1 RNU6-32P-201ENST00000383948 107 ntBASIC-1.49□□□□□ -2.65
PRPF39Q86UA1 RNU6-13P-201ENST00000384248 107 ntBASIC-1.49□□□□□ -2.65
PRPF39Q86UA1 RNU6-12P-201ENST00000384604 107 ntBASIC-1.49□□□□□ -2.65
PRPF39Q86UA1 RNU6-41P-201ENST00000384741 107 ntBASIC-1.49□□□□□ -2.65
PRPF39Q86UA1 RNU6-49P-201ENST00000384256 107 ntBASIC-1.5□□□□□ -2.65
PRPF39Q86UA1 RNU6-1131P-201ENST00000364955 107 ntBASIC-1.51□□□□□ -2.65
PRPF39Q86UA1 SNORA41B-201ENST00000384785 128 ntBASIC-1.51□□□□□ -2.65
PRPF39Q86UA1 MTND4LP1-201ENST00000446263 157 ntBASIC-1.51□□□□□ -2.65
PRPF39Q86UA1 MIR3115-201ENST00000577915 68 ntBASIC-1.51□□□□□ -2.65
PRPF39Q86UA1 MIR3165-201ENST00000579874 75 ntBASIC-1.51□□□□□ -2.65
PRPF39Q86UA1 AC138207.3-201ENST00000585289 166 ntBASIC-1.51□□□□□ -2.65
PRPF39Q86UA1 RNU6-668P-201ENST00000364180 107 ntBASIC-1.52□□□□□ -2.65
PRPF39Q86UA1 RNU6-1134P-201ENST00000365156 101 ntBASIC-1.52□□□□□ -2.65
PRPF39Q86UA1 SNORD20-201ENST00000384550 80 ntBASIC-1.52□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms