Protein–RNA interactions for Protein: Q07011

TNFRSF9, Tumor necrosis factor receptor superfamily member 9, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9Q07011 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.72□□□□□ -2.52
TNFRSF9Q07011 MIR6874-201ENST00000635894 71 ntBASIC-0.72□□□□□ -2.52
TNFRSF9Q07011 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.73□□□□□ -2.53
TNFRSF9Q07011 RNU6-640P-201ENST00000363693 105 ntBASIC-0.73□□□□□ -2.53
TNFRSF9Q07011 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.73□□□□□ -2.53
TNFRSF9Q07011 RNU6-458P-201ENST00000384179 107 ntBASIC-0.73□□□□□ -2.53
TNFRSF9Q07011 AC090616.4-201ENST00000448026 115 ntBASIC-0.73□□□□□ -2.53
TNFRSF9Q07011 RNU6-807P-201ENST00000516805 107 ntBASIC-0.73□□□□□ -2.53
TNFRSF9Q07011 MIR4484-201ENST00000582855 83 ntBASIC-0.73□□□□□ -2.53
TNFRSF9Q07011 MIR3675-201ENST00000583661 73 ntBASIC-0.73□□□□□ -2.53
TNFRSF9Q07011 U6.58-201ENST00000613107 107 ntBASIC-0.73□□□□□ -2.53
TNFRSF9Q07011 AC091912.2-201ENST00000624798 167 ntBASIC-0.73□□□□□ -2.53
TNFRSF9Q07011 MIR664A-201ENST00000626086 82 ntBASIC-0.73□□□□□ -2.53
TNFRSF9Q07011 MIR2052-201ENST00000636055 55 ntBASIC-0.73□□□□□ -2.53
TNFRSF9Q07011 MIR5683-201ENST00000636514 76 ntBASIC-0.73□□□□□ -2.53
TNFRSF9Q07011 MIRLET7A1-201ENST00000362295 80 ntBASIC-0.74□□□□□ -2.53
TNFRSF9Q07011 SNORA63.4-201ENST00000362763 126 ntBASIC-0.74□□□□□ -2.53
TNFRSF9Q07011 SNORD45.1-201ENST00000363181 77 ntBASIC-0.74□□□□□ -2.53
TNFRSF9Q07011 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.74□□□□□ -2.53
TNFRSF9Q07011 SNORA8.1-201ENST00000384250 140 ntBASIC-0.74□□□□□ -2.53
TNFRSF9Q07011 MIR520D-201ENST00000385002 87 ntBASIC-0.74□□□□□ -2.53
TNFRSF9Q07011 RNU6-587P-201ENST00000391282 106 ntBASIC-0.74□□□□□ -2.53
TNFRSF9Q07011 Y_RNA.611-201ENST00000410682 108 ntBASIC-0.74□□□□□ -2.53
TNFRSF9Q07011 RNU6-313P-201ENST00000516317 112 ntBASIC-0.74□□□□□ -2.53
TNFRSF9Q07011 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.74□□□□□ -2.53
TNFRSF9Q07011 RNU6-303P-201ENST00000517091 106 ntBASIC-0.74□□□□□ -2.53
TNFRSF9Q07011 MIR4324-201ENST00000584846 72 ntBASIC-0.74□□□□□ -2.53
TNFRSF9Q07011 SNORD115-37-201ENST00000363768 82 ntBASIC-0.75□□□□□ -2.53
TNFRSF9Q07011 RNU6-598P-201ENST00000364017 105 ntBASIC-0.75□□□□□ -2.53
TNFRSF9Q07011 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.75□□□□□ -2.53
TNFRSF9Q07011 SNORD116-22-201ENST00000384430 92 ntBASIC-0.75□□□□□ -2.53
TNFRSF9Q07011 RNU4-61P-201ENST00000411243 107 ntBASIC-0.75□□□□□ -2.53
TNFRSF9Q07011 RNU6-557P-201ENST00000516842 110 ntBASIC-0.75□□□□□ -2.53
TNFRSF9Q07011 MIR4306-201ENST00000583390 91 ntBASIC-0.75□□□□□ -2.53
TNFRSF9Q07011 Y_RNA.73-201ENST00000362910 113 ntBASIC-0.76□□□□□ -2.53
TNFRSF9Q07011 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.76□□□□□ -2.53
TNFRSF9Q07011 RNU6-686P-201ENST00000364839 107 ntBASIC-0.76□□□□□ -2.53
TNFRSF9Q07011 RNU6-1325P-201ENST00000364905 105 ntBASIC-0.76□□□□□ -2.53
TNFRSF9Q07011 RNA5SP331-201ENST00000364986 107 ntBASIC-0.76□□□□□ -2.53
TNFRSF9Q07011 MIR527-201ENST00000385244 85 ntBASIC-0.76□□□□□ -2.53
TNFRSF9Q07011 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.76□□□□□ -2.53
TNFRSF9Q07011 MIR3910-1-201ENST00000580936 111 ntBASIC-0.76□□□□□ -2.53
TNFRSF9Q07011 U2.18-201ENST00000622185 84 ntBASIC-0.76□□□□□ -2.53
TNFRSF9Q07011 AC006160.2-201ENST00000637708 154 ntBASIC-0.76□□□□□ -2.53
TNFRSF9Q07011 AC132825.6-201ENST00000638861 357 ntBASIC-0.76□□□□□ -2.53
TNFRSF9Q07011 RNU6-608P-201ENST00000383927 104 ntBASIC-0.77□□□□□ -2.53
TNFRSF9Q07011 RNU6-675P-201ENST00000384236 104 ntBASIC-0.77□□□□□ -2.53
TNFRSF9Q07011 RNU6-24P-201ENST00000384440 107 ntBASIC-0.77□□□□□ -2.53
TNFRSF9Q07011 MIR630-201ENST00000384957 97 ntBASIC-0.77□□□□□ -2.53
TNFRSF9Q07011 MIR548Q-201ENST00000408404 100 ntBASIC-0.77□□□□□ -2.53
TNFRSF9Q07011 RNA5SP266-201ENST00000410273 108 ntBASIC-0.77□□□□□ -2.53
TNFRSF9Q07011 SNORA40.13-201ENST00000516379 120 ntBASIC-0.77□□□□□ -2.53
TNFRSF9Q07011 RNU6-147P-201ENST00000383983 107 ntBASIC-0.78□□□□□ -2.53
TNFRSF9Q07011 RNU6-129P-201ENST00000391022 107 ntBASIC-0.78□□□□□ -2.53
TNFRSF9Q07011 RNU6-630P-201ENST00000391258 106 ntBASIC-0.78□□□□□ -2.53
TNFRSF9Q07011 snoMBII-202.2-201ENST00000517263 86 ntBASIC-0.78□□□□□ -2.53
TNFRSF9Q07011 MIR548V-201ENST00000584165 80 ntBASIC-0.78□□□□□ -2.53
TNFRSF9Q07011 Y_RNA.17-201ENST00000362433 111 ntBASIC-0.79□□□□□ -2.54
TNFRSF9Q07011 RNU6-698P-201ENST00000363523 107 ntBASIC-0.79□□□□□ -2.54
TNFRSF9Q07011 RNU6-755P-201ENST00000364400 103 ntBASIC-0.79□□□□□ -2.54
TNFRSF9Q07011 RNU6-164P-201ENST00000364604 103 ntBASIC-0.79□□□□□ -2.54
TNFRSF9Q07011 Y_RNA.273-201ENST00000364703 102 ntBASIC-0.79□□□□□ -2.54
TNFRSF9Q07011 RNU6-34P-201ENST00000364874 107 ntBASIC-0.79□□□□□ -2.54
TNFRSF9Q07011 RNU6-49P-201ENST00000384256 107 ntBASIC-0.79□□□□□ -2.54
TNFRSF9Q07011 SNORD45A-201ENST00000384512 84 ntBASIC-0.79□□□□□ -2.54
TNFRSF9Q07011 RNU6-576P-201ENST00000390854 102 ntBASIC-0.79□□□□□ -2.54
TNFRSF9Q07011 SNORD113-2-201ENST00000391082 72 ntBASIC-0.79□□□□□ -2.54
TNFRSF9Q07011 Y_RNA.593-201ENST00000410292 98 ntBASIC-0.79□□□□□ -2.54
TNFRSF9Q07011 SNORD57-201ENST00000448188 72 ntBASIC-0.79□□□□□ -2.54
TNFRSF9Q07011 MIR6502-201ENST00000617296 76 ntBASIC-0.79□□□□□ -2.54
TNFRSF9Q07011 MIR6738-201ENST00000619620 64 ntBASIC-0.79□□□□□ -2.54
TNFRSF9Q07011 SNORD113.1-201ENST00000363280 73 ntBASIC-0.8□□□□□ -2.54
TNFRSF9Q07011 SNORA41B-201ENST00000384785 128 ntBASIC-0.8□□□□□ -2.54
TNFRSF9Q07011 RNU6-696P-201ENST00000390834 107 ntBASIC-0.8□□□□□ -2.54
TNFRSF9Q07011 RNU6-844P-201ENST00000517175 102 ntBASIC-0.8□□□□□ -2.54
TNFRSF9Q07011 MIR4490-201ENST00000582647 84 ntBASIC-0.8□□□□□ -2.54
TNFRSF9Q07011 SNORD20-201ENST00000384550 80 ntBASIC-0.81□□□□□ -2.54
TNFRSF9Q07011 RNU6-258P-201ENST00000390884 101 ntBASIC-0.81□□□□□ -2.54
TNFRSF9Q07011 Y_RNA.603-201ENST00000410571 108 ntBASIC-0.81□□□□□ -2.54
TNFRSF9Q07011 RNU6-168P-201ENST00000516189 101 ntBASIC-0.81□□□□□ -2.54
TNFRSF9Q07011 MIR3115-201ENST00000577915 68 ntBASIC-0.81□□□□□ -2.54
TNFRSF9Q07011 MIR4520-1-201ENST00000582609 70 ntBASIC-0.81□□□□□ -2.54
TNFRSF9Q07011 RNU6-1131P-201ENST00000364955 107 ntBASIC-0.82□□□□□ -2.54
TNFRSF9Q07011 SNORD113-1-201ENST00000365321 69 ntBASIC-0.82□□□□□ -2.54
TNFRSF9Q07011 RNU6-1267P-201ENST00000410747 107 ntBASIC-0.82□□□□□ -2.54
TNFRSF9Q07011 AL606753.1-201ENST00000427435 87 ntBASIC-0.82□□□□□ -2.54
TNFRSF9Q07011 Y_RNA.788-201ENST00000622394 112 ntBASIC-0.82□□□□□ -2.54
TNFRSF9Q07011 RNU6-215P-201ENST00000365169 102 ntBASIC-0.83□□□□□ -2.54
TNFRSF9Q07011 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-0.83□□□□□ -2.54
TNFRSF9Q07011 RNU6-563P-201ENST00000364872 108 ntBASIC-0.84□□□□□ -2.54
TNFRSF9Q07011 Y_RNA.316-201ENST00000365118 111 ntBASIC-0.84□□□□□ -2.54
TNFRSF9Q07011 RNU6-32P-201ENST00000383948 107 ntBASIC-0.84□□□□□ -2.54
TNFRSF9Q07011 RNU6-13P-201ENST00000384248 107 ntBASIC-0.84□□□□□ -2.54
TNFRSF9Q07011 SNORD116-24-201ENST00000384549 92 ntBASIC-0.84□□□□□ -2.54
TNFRSF9Q07011 RNU6-12P-201ENST00000384604 107 ntBASIC-0.84□□□□□ -2.54
TNFRSF9Q07011 RNU6-41P-201ENST00000384741 107 ntBASIC-0.84□□□□□ -2.54
TNFRSF9Q07011 RNU6-706P-201ENST00000517229 104 ntBASIC-0.84□□□□□ -2.54
TNFRSF9Q07011 MIR3170-201ENST00000582699 77 ntBASIC-0.84□□□□□ -2.54
TNFRSF9Q07011 RNU6-79P-201ENST00000362511 107 ntBASIC-0.85□□□□□ -2.55
TNFRSF9Q07011 SNORD1B-201ENST00000363091 84 ntBASIC-0.85□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms