Protein–RNA interactions for Protein: P53804

TTC3, E3 ubiquitin-protein ligase TTC3, humanhuman

Predictions only

Length 2,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3P53804 SNORD60.1-201ENST00000362451 73 ntBASIC0.11□□□□□ -2.39
TTC3P53804 AL391099.1-201ENST00000624635 187 ntBASIC0.11□□□□□ -2.39
TTC3P53804 snoR1.1-201ENST00000628177 80 ntBASIC0.11□□□□□ -2.39
TTC3P53804 SNORD115-23-201ENST00000364461 82 ntBASIC0.11□□□□□ -2.39
TTC3P53804 Y_RNA.325-201ENST00000365171 122 ntBASIC0.11□□□□□ -2.39
TTC3P53804 MIR5190-201ENST00000581537 80 ntBASIC0.11□□□□□ -2.39
TTC3P53804 RNU6-929P-201ENST00000384429 107 ntBASIC0.1□□□□□ -2.39
TTC3P53804 MIR329-2-201ENST00000385029 84 ntBASIC0.1□□□□□ -2.39
TTC3P53804 RNU6-92P-201ENST00000605893 104 ntBASIC0.1□□□□□ -2.39
TTC3P53804 MIR6854-201ENST00000614935 69 ntBASIC0.1□□□□□ -2.39
TTC3P53804 SNORD114-5-201ENST00000362928 70 ntBASIC0.09□□□□□ -2.39
TTC3P53804 MIR3938-201ENST00000582157 103 ntBASIC0.09□□□□□ -2.39
TTC3P53804 MIR4290-201ENST00000583807 95 ntBASIC0.09□□□□□ -2.39
TTC3P53804 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.09□□□□□ -2.39
TTC3P53804 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.09□□□□□ -2.4
TTC3P53804 AC244250.2-201ENST00000418731 148 ntBASIC0.09□□□□□ -2.4
TTC3P53804 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.09□□□□□ -2.4
TTC3P53804 SNORD114-12-201ENST00000365400 75 ntBASIC0.08□□□□□ -2.4
TTC3P53804 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.08□□□□□ -2.4
TTC3P53804 RNU6-455P-201ENST00000384681 107 ntBASIC0.08□□□□□ -2.4
TTC3P53804 SNORD57-201ENST00000448188 72 ntBASIC0.07□□□□□ -2.4
TTC3P53804 Y_RNA.74-201ENST00000362911 99 ntBASIC0.06□□□□□ -2.4
TTC3P53804 RNU6-302P-201ENST00000365249 107 ntBASIC0.06□□□□□ -2.4
TTC3P53804 RNU7-55P-201ENST00000459426 62 ntBASIC0.06□□□□□ -2.4
TTC3P53804 RNA5SP470-201ENST00000516463 106 ntBASIC0.06□□□□□ -2.4
TTC3P53804 RNU6-900P-201ENST00000384498 102 ntBASIC0.06□□□□□ -2.4
TTC3P53804 Y_RNA.282-201ENST00000364793 102 ntBASIC0.05□□□□□ -2.4
TTC3P53804 SNORD56B-201ENST00000384713 71 ntBASIC0.05□□□□□ -2.4
TTC3P53804 SCARNA21.1-201ENST00000515996 128 ntBASIC0.04□□□□□ -2.4
TTC3P53804 Y_RNA.698-201ENST00000516798 118 ntBASIC0.04□□□□□ -2.4
TTC3P53804 U7.5-201ENST00000517224 61 ntBASIC0.04□□□□□ -2.4
TTC3P53804 RNU6-901P-201ENST00000384593 106 ntBASIC0.03□□□□□ -2.4
TTC3P53804 RNU6-1133P-201ENST00000410963 100 ntBASIC0.03□□□□□ -2.4
TTC3P53804 MIR6507-201ENST00000613630 70 ntBASIC0.03□□□□□ -2.4
TTC3P53804 uc_338.36-201ENST00000622331 158 ntBASIC0.03□□□□□ -2.4
TTC3P53804 SNORD116-16-201ENST00000384533 92 ntBASIC0.03□□□□□ -2.41
TTC3P53804 RNA5SP285-201ENST00000516619 119 ntBASIC0.03□□□□□ -2.41
TTC3P53804 MIR8068-201ENST00000618032 68 ntBASIC0.03□□□□□ -2.41
TTC3P53804 RNU6-669P-201ENST00000365575 107 ntBASIC0.02□□□□□ -2.41
TTC3P53804 MIR527-201ENST00000385244 85 ntBASIC0.02□□□□□ -2.41
TTC3P53804 MIR1295B-201ENST00000636144 60 ntBASIC0.02□□□□□ -2.41
TTC3P53804 SNORD114-16-201ENST00000363044 70 ntBASIC0.01□□□□□ -2.41
TTC3P53804 SNORA18.1-201ENST00000363418 128 ntBASIC0.01□□□□□ -2.41
TTC3P53804 SNORA41B-201ENST00000384785 128 ntBASIC0.01□□□□□ -2.41
TTC3P53804 MIR517B-201ENST00000385102 67 ntBASIC0.01□□□□□ -2.41
TTC3P53804 AL445584.3-201ENST00000617173 78 ntBASIC0.01□□□□□ -2.41
TTC3P53804 MIR4280-201ENST00000582178 76 ntBASIC0.01□□□□□ -2.41
TTC3P53804 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.01□□□□□ -2.41
TTC3P53804 RNU6-499P-201ENST00000365615 107 ntBASIC0□□□□□ -2.41
TTC3P53804 MIR548C-201ENST00000384815 97 ntBASIC0□□□□□ -2.41
TTC3P53804 AC114755.3-201ENST00000481111 251 ntBASIC0□□□□□ -2.41
TTC3P53804 AL353803.5-201ENST00000599815 141 ntBASIC0□□□□□ -2.41
TTC3P53804 MIR148A-201ENST00000362215 68 ntBASIC-0.01□□□□□ -2.41
TTC3P53804 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.01□□□□□ -2.41
TTC3P53804 RNU6-518P-201ENST00000516056 96 ntBASIC-0.02□□□□□ -2.41
TTC3P53804 MIR4263-201ENST00000584745 83 ntBASIC-0.02□□□□□ -2.41
TTC3P53804 SNORA62.4-201ENST00000365504 151 ntBASIC-0.03□□□□□ -2.41
TTC3P53804 SNORD18.2-201ENST00000459604 70 ntBASIC-0.03□□□□□ -2.41
TTC3P53804 MIR429-201ENST00000362106 83 ntBASIC-0.04□□□□□ -2.42
TTC3P53804 MIR655-201ENST00000362159 97 ntBASIC-0.04□□□□□ -2.42
TTC3P53804 RNU6-973P-201ENST00000364690 107 ntBASIC-0.04□□□□□ -2.42
TTC3P53804 RNU6-520P-201ENST00000384717 104 ntBASIC-0.04□□□□□ -2.42
TTC3P53804 MIR4768-201ENST00000585270 74 ntBASIC-0.04□□□□□ -2.42
TTC3P53804 RNU6-458P-201ENST00000384179 107 ntBASIC-0.05□□□□□ -2.42
TTC3P53804 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.05□□□□□ -2.42
TTC3P53804 RNU7-88P-201ENST00000458752 63 ntBASIC-0.05□□□□□ -2.42
TTC3P53804 AC108676.2-201ENST00000605225 163 ntBASIC-0.05□□□□□ -2.42
TTC3P53804 U6.58-201ENST00000613107 107 ntBASIC-0.05□□□□□ -2.42
TTC3P53804 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.06□□□□□ -2.42
TTC3P53804 RNU6-246P-201ENST00000384702 107 ntBASIC-0.06□□□□□ -2.42
TTC3P53804 AC104692.1-201ENST00000472406 90 ntBASIC-0.06□□□□□ -2.42
TTC3P53804 SNORD63.1-201ENST00000516178 80 ntBASIC-0.06□□□□□ -2.42
TTC3P53804 MIR5589-201ENST00000579442 60 ntBASIC-0.06□□□□□ -2.42
TTC3P53804 MIR6888-201ENST00000621977 67 ntBASIC-0.06□□□□□ -2.42
TTC3P53804 SNORD1B-201ENST00000363091 84 ntBASIC-0.06□□□□□ -2.42
TTC3P53804 MIR3666-201ENST00000607845 111 ntBASIC-0.06□□□□□ -2.42
TTC3P53804 MIR548AG1-201ENST00000579932 66 ntBASIC-0.07□□□□□ -2.42
TTC3P53804 RNU6-924P-201ENST00000362926 108 ntBASIC-0.08□□□□□ -2.42
TTC3P53804 RNU7-151P-201ENST00000516930 53 ntBASIC-0.08□□□□□ -2.42
TTC3P53804 MIR4464-201ENST00000580818 92 ntBASIC-0.08□□□□□ -2.42
TTC3P53804 MIR6851-201ENST00000617060 67 ntBASIC-0.08□□□□□ -2.42
TTC3P53804 RNU6-696P-201ENST00000390834 107 ntBASIC-0.08□□□□□ -2.42
TTC3P53804 RNU6-35P-201ENST00000384530 107 ntBASIC-0.09□□□□□ -2.42
TTC3P53804 SNORD4A-201ENST00000459174 72 ntBASIC-0.09□□□□□ -2.42
TTC3P53804 MIR5704-201ENST00000584029 77 ntBASIC-0.09□□□□□ -2.42
TTC3P53804 RNA5SP300-201ENST00000391197 107 ntBASIC-0.1□□□□□ -2.43
TTC3P53804 AC093726.3-201ENST00000637588 150 ntBASIC-0.1□□□□□ -2.43
TTC3P53804 SNORD114-11-201ENST00000363738 75 ntBASIC-0.11□□□□□ -2.43
TTC3P53804 AL590491.3-201ENST00000610731 82 ntBASIC-0.11□□□□□ -2.43
TTC3P53804 MIR548AA1-201ENST00000384971 97 ntBASIC-0.12□□□□□ -2.43
TTC3P53804 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.12□□□□□ -2.43
TTC3P53804 RNU7-119P-201ENST00000459279 63 ntBASIC-0.13□□□□□ -2.43
TTC3P53804 SNORD22.1-201ENST00000516331 125 ntBASIC-0.13□□□□□ -2.43
TTC3P53804 RNU6-614P-201ENST00000384369 107 ntBASIC-0.13□□□□□ -2.43
TTC3P53804 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.13□□□□□ -2.43
TTC3P53804 MTND4LP19-201ENST00000403051 166 ntBASIC-0.13□□□□□ -2.43
TTC3P53804 U6.59-201ENST00000615686 107 ntBASIC-0.13□□□□□ -2.43
TTC3P53804 MIR633-201ENST00000384821 98 ntBASIC-0.14□□□□□ -2.43
TTC3P53804 MIR124-2-201ENST00000385081 109 ntBASIC-0.14□□□□□ -2.43
TTC3P53804 MIR466-201ENST00000580653 84 ntBASIC-0.14□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 181.6 ms