Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 MIR3170-201ENST00000582699 77 ntBASIC-1.77□□□□□ -2.69
COL4A5P29400 Y_RNA.59-201ENST00000362828 102 ntBASIC-1.77□□□□□ -2.69
COL4A5P29400 AL450471.1-201ENST00000447509 127 ntBASIC-1.77□□□□□ -2.69
COL4A5P29400 RNU6-656P-201ENST00000516785 107 ntBASIC-1.77□□□□□ -2.69
COL4A5P29400 AL117187.1-201ENST00000555482 181 ntBASIC-1.77□□□□□ -2.69
COL4A5P29400 SNORD58C-201ENST00000365223 64 ntBASIC-1.78□□□□□ -2.69
COL4A5P29400 Y_RNA.420-201ENST00000384043 110 ntBASIC-1.78□□□□□ -2.69
COL4A5P29400 MIR548AA1-201ENST00000384971 97 ntBASIC-1.78□□□□□ -2.69
COL4A5P29400 Y_RNA.580-201ENST00000391004 95 ntBASIC-1.78□□□□□ -2.69
COL4A5P29400 SNORA81.3-201ENST00000517283 198 ntBASIC-1.78□□□□□ -2.69
COL4A5P29400 MIR548X2-201ENST00000579776 100 ntBASIC-1.78□□□□□ -2.69
COL4A5P29400 Y_RNA.830-201ENST00000628531 96 ntBASIC-1.78□□□□□ -2.69
COL4A5P29400 RNU6-887P-201ENST00000410660 100 ntBASIC-1.79□□□□□ -2.7
COL4A5P29400 MIR429-201ENST00000362106 83 ntBASIC-1.8□□□□□ -2.7
COL4A5P29400 SNORA27.2-201ENST00000363365 126 ntBASIC-1.8□□□□□ -2.7
COL4A5P29400 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.8□□□□□ -2.7
COL4A5P29400 SNORD60-201ENST00000383903 83 ntBASIC-1.8□□□□□ -2.7
COL4A5P29400 MIR4796-201ENST00000580742 81 ntBASIC-1.8□□□□□ -2.7
COL4A5P29400 U6.81-201ENST00000612550 106 ntBASIC-1.8□□□□□ -2.7
COL4A5P29400 MTCYBP6-201ENST00000441810 138 ntBASIC-1.8□□□□□ -2.7
COL4A5P29400 Y_RNA.658-201ENST00000515990 97 ntBASIC-1.8□□□□□ -2.7
COL4A5P29400 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.8□□□□□ -2.7
COL4A5P29400 MIR5693-201ENST00000577722 73 ntBASIC-1.8□□□□□ -2.7
COL4A5P29400 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.81□□□□□ -2.7
COL4A5P29400 MIR581-201ENST00000384895 96 ntBASIC-1.81□□□□□ -2.7
COL4A5P29400 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.81□□□□□ -2.7
COL4A5P29400 MIR548F4-201ENST00000408515 105 ntBASIC-1.81□□□□□ -2.7
COL4A5P29400 RNY4P25-201ENST00000459254 96 ntBASIC-1.81□□□□□ -2.7
COL4A5P29400 MIR4777-201ENST00000583710 86 ntBASIC-1.81□□□□□ -2.7
COL4A5P29400 U2.7-201ENST00000619197 100 ntBASIC-1.81□□□□□ -2.7
COL4A5P29400 RNU6-340P-201ENST00000364005 107 ntBASIC-1.82□□□□□ -2.7
COL4A5P29400 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.82□□□□□ -2.7
COL4A5P29400 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.82□□□□□ -2.7
COL4A5P29400 RNU6-807P-201ENST00000516805 107 ntBASIC-1.82□□□□□ -2.7
COL4A5P29400 U2.18-201ENST00000622185 84 ntBASIC-1.82□□□□□ -2.7
COL4A5P29400 RNU6-247P-201ENST00000362636 107 ntBASIC-1.83□□□□□ -2.7
COL4A5P29400 RNU6-912P-201ENST00000363800 104 ntBASIC-1.83□□□□□ -2.7
COL4A5P29400 MIR606-201ENST00000384851 96 ntBASIC-1.83□□□□□ -2.7
COL4A5P29400 RNU6-995P-201ENST00000391244 107 ntBASIC-1.83□□□□□ -2.7
COL4A5P29400 RNU7-120P-201ENST00000459334 63 ntBASIC-1.83□□□□□ -2.7
COL4A5P29400 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.83□□□□□ -2.7
COL4A5P29400 MIR3144-201ENST00000579460 79 ntBASIC-1.83□□□□□ -2.7
COL4A5P29400 RNU6-598P-201ENST00000364017 105 ntBASIC-1.84□□□□□ -2.7
COL4A5P29400 RNU6-645P-201ENST00000364649 106 ntBASIC-1.84□□□□□ -2.7
COL4A5P29400 SNORD113-3-201ENST00000364830 72 ntBASIC-1.84□□□□□ -2.7
COL4A5P29400 RNU6-803P-201ENST00000516034 102 ntBASIC-1.84□□□□□ -2.7
COL4A5P29400 SCARNA23-201ENST00000516060 130 ntBASIC-1.84□□□□□ -2.7
COL4A5P29400 RNU6-795P-201ENST00000516323 103 ntBASIC-1.84□□□□□ -2.7
COL4A5P29400 AL157777.2-201ENST00000258070 137 ntBASIC-1.85□□□□□ -2.71
COL4A5P29400 SNORD116-10-201ENST00000363791 102 ntBASIC-1.85□□□□□ -2.71
COL4A5P29400 Y_RNA.398-201ENST00000383952 99 ntBASIC-1.85□□□□□ -2.71
COL4A5P29400 Y_RNA.680-201ENST00000516441 93 ntBASIC-1.85□□□□□ -2.71
COL4A5P29400 RNU6-537P-201ENST00000517277 103 ntBASIC-1.85□□□□□ -2.71
COL4A5P29400 Y_RNA.297-201ENST00000364950 91 ntBASIC-1.86□□□□□ -2.71
COL4A5P29400 MIRLET7A3-201ENST00000362116 74 ntBASIC-1.86□□□□□ -2.71
COL4A5P29400 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.86□□□□□ -2.71
COL4A5P29400 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.86□□□□□ -2.71
COL4A5P29400 RNU6-587P-201ENST00000391282 106 ntBASIC-1.86□□□□□ -2.71
COL4A5P29400 RNU6-394P-201ENST00000410735 107 ntBASIC-1.86□□□□□ -2.71
COL4A5P29400 RNY3P8-201ENST00000411366 126 ntBASIC-1.86□□□□□ -2.71
COL4A5P29400 RNU7-151P-201ENST00000516930 53 ntBASIC-1.86□□□□□ -2.71
COL4A5P29400 MIR3675-201ENST00000583661 73 ntBASIC-1.86□□□□□ -2.71
COL4A5P29400 RNY1P1-201ENST00000364372 112 ntBASIC-1.87□□□□□ -2.71
COL4A5P29400 RNU6-669P-201ENST00000365575 107 ntBASIC-1.87□□□□□ -2.71
COL4A5P29400 RNU6-738P-201ENST00000384531 106 ntBASIC-1.87□□□□□ -2.71
COL4A5P29400 RNU6-1044P-201ENST00000384755 107 ntBASIC-1.87□□□□□ -2.71
COL4A5P29400 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.87□□□□□ -2.71
COL4A5P29400 Y_RNA.266-201ENST00000364678 96 ntBASIC-1.88□□□□□ -2.71
COL4A5P29400 MIR548C-201ENST00000384815 97 ntBASIC-1.88□□□□□ -2.71
COL4A5P29400 MIR379-201ENST00000362218 67 ntBASIC-1.89□□□□□ -2.71
COL4A5P29400 MTCYBP9-201ENST00000431021 303 ntBASIC-1.89□□□□□ -2.71
COL4A5P29400 RNU7-174P-201ENST00000516248 59 ntBASIC-1.89□□□□□ -2.71
COL4A5P29400 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.89□□□□□ -2.71
COL4A5P29400 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.9□□□□□ -2.71
COL4A5P29400 Y_RNA.812-201ENST00000610788 101 ntBASIC-1.9□□□□□ -2.71
COL4A5P29400 Y_RNA.784-201ENST00000613803 101 ntBASIC-1.9□□□□□ -2.71
COL4A5P29400 Y_RNA.787-201ENST00000616522 101 ntBASIC-1.9□□□□□ -2.71
COL4A5P29400 Y_RNA.780-201ENST00000617336 101 ntBASIC-1.9□□□□□ -2.71
COL4A5P29400 Y_RNA.801-201ENST00000619005 101 ntBASIC-1.9□□□□□ -2.71
COL4A5P29400 Y_RNA.489-201ENST00000384410 101 ntBASIC-1.9□□□□□ -2.71
COL4A5P29400 Y_RNA.668-201ENST00000516233 93 ntBASIC-1.9□□□□□ -2.71
COL4A5P29400 U4.4-201ENST00000620626 117 ntBASIC-1.9□□□□□ -2.71
COL4A5P29400 AL035470.1-201ENST00000622571 220 ntBASIC-1.9□□□□□ -2.71
COL4A5P29400 Y_RNA.79-201ENST00000362992 113 ntBASIC-1.91□□□□□ -2.72
COL4A5P29400 RNU6-1277P-201ENST00000364561 107 ntBASIC-1.91□□□□□ -2.72
COL4A5P29400 RNU6-828P-201ENST00000364876 107 ntBASIC-1.91□□□□□ -2.72
COL4A5P29400 RNU6-867P-201ENST00000364956 107 ntBASIC-1.91□□□□□ -2.72
COL4A5P29400 RNU6-974P-201ENST00000384099 108 ntBASIC-1.91□□□□□ -2.72
COL4A5P29400 RNU6-106P-201ENST00000384405 107 ntBASIC-1.91□□□□□ -2.72
COL4A5P29400 RNU6-987P-201ENST00000384759 104 ntBASIC-1.91□□□□□ -2.72
COL4A5P29400 SNORD77.2-201ENST00000391045 68 ntBASIC-1.91□□□□□ -2.72
COL4A5P29400 SNORD113-2-201ENST00000391082 72 ntBASIC-1.91□□□□□ -2.72
COL4A5P29400 MIR548N-201ENST00000408742 75 ntBASIC-1.91□□□□□ -2.72
COL4A5P29400 Y_RNA.609-201ENST00000410669 89 ntBASIC-1.91□□□□□ -2.72
COL4A5P29400 Y_RNA.652-201ENST00000458902 102 ntBASIC-1.91□□□□□ -2.72
COL4A5P29400 Y_RNA.134-201ENST00000363435 105 ntBASIC-1.92□□□□□ -2.72
COL4A5P29400 SNORD116-18-201ENST00000383961 92 ntBASIC-1.92□□□□□ -2.72
COL4A5P29400 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.92□□□□□ -2.72
COL4A5P29400 Y_RNA.586-201ENST00000391146 98 ntBASIC-1.92□□□□□ -2.72
COL4A5P29400 RNU6-1211P-201ENST00000459179 105 ntBASIC-1.92□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 222.7 ms