Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 MIR548AG1-201ENST00000579932 66 ntBASIC-0.75□□□□□ -2.53
CDH3P22223 MIR382-201ENST00000637119 76 ntBASIC-0.75□□□□□ -2.53
CDH3P22223 Y_RNA.81-201ENST00000362997 102 ntBASIC-0.76□□□□□ -2.53
CDH3P22223 RNY1P1-201ENST00000364372 112 ntBASIC-0.76□□□□□ -2.53
CDH3P22223 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.76□□□□□ -2.53
CDH3P22223 Y_RNA.607-201ENST00000410597 98 ntBASIC-0.76□□□□□ -2.53
CDH3P22223 RNU6-656P-201ENST00000516785 107 ntBASIC-0.76□□□□□ -2.53
CDH3P22223 MIR5588-201ENST00000581890 63 ntBASIC-0.76□□□□□ -2.53
CDH3P22223 IGLL4P-201ENST00000614590 133 ntBASIC-0.76□□□□□ -2.53
CDH3P22223 SNORD18.2-201ENST00000459604 70 ntBASIC-0.77□□□□□ -2.53
CDH3P22223 MIR4499-201ENST00000584834 69 ntBASIC-0.77□□□□□ -2.53
CDH3P22223 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.78□□□□□ -2.53
CDH3P22223 SNORA8.1-201ENST00000384250 140 ntBASIC-0.78□□□□□ -2.53
CDH3P22223 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.78□□□□□ -2.53
CDH3P22223 RNU7-134P-201ENST00000458997 64 ntBASIC-0.78□□□□□ -2.53
CDH3P22223 MIR3675-201ENST00000583661 73 ntBASIC-0.78□□□□□ -2.53
CDH3P22223 RNA5SP331-201ENST00000364986 107 ntBASIC-0.79□□□□□ -2.54
CDH3P22223 RNU6-979P-201ENST00000383896 107 ntBASIC-0.79□□□□□ -2.54
CDH3P22223 Y_RNA.426-201ENST00000384068 113 ntBASIC-0.79□□□□□ -2.54
CDH3P22223 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.79□□□□□ -2.54
CDH3P22223 SCARNA18B-201ENST00000458806 135 ntBASIC-0.79□□□□□ -2.54
CDH3P22223 Y_RNA.694-201ENST00000516677 117 ntBASIC-0.79□□□□□ -2.54
CDH3P22223 Y_RNA.219-201ENST00000364232 113 ntBASIC-0.8□□□□□ -2.54
CDH3P22223 RNU7-154P-201ENST00000516194 62 ntBASIC-0.8□□□□□ -2.54
CDH3P22223 RNU6-645P-201ENST00000364649 106 ntBASIC-0.81□□□□□ -2.54
CDH3P22223 MIR519A2-201ENST00000384990 87 ntBASIC-0.81□□□□□ -2.54
CDH3P22223 SNORD83B-201ENST00000386745 93 ntBASIC-0.81□□□□□ -2.54
CDH3P22223 RNU6-518P-201ENST00000516056 96 ntBASIC-0.81□□□□□ -2.54
CDH3P22223 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.81□□□□□ -2.54
CDH3P22223 uc_338.19-201ENST00000616808 99 ntBASIC-0.81□□□□□ -2.54
CDH3P22223 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.81□□□□□ -2.54
CDH3P22223 SNORD115-22-201ENST00000364456 82 ntBASIC-0.82□□□□□ -2.54
CDH3P22223 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.82□□□□□ -2.54
CDH3P22223 SNX3P1X-201ENST00000414887 175 ntBASIC-0.82□□□□□ -2.54
CDH3P22223 MIR4484-201ENST00000582855 83 ntBASIC-0.82□□□□□ -2.54
CDH3P22223 Y_RNA.316-201ENST00000365118 111 ntBASIC-0.83□□□□□ -2.54
CDH3P22223 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.83□□□□□ -2.54
CDH3P22223 SNORD63.1-201ENST00000516178 80 ntBASIC-0.83□□□□□ -2.54
CDH3P22223 MIR1297-201ENST00000637311 77 ntBASIC-0.83□□□□□ -2.54
CDH3P22223 RNU6-315P-201ENST00000362666 107 ntBASIC-0.84□□□□□ -2.54
CDH3P22223 RNU6-604P-201ENST00000390917 100 ntBASIC-0.84□□□□□ -2.54
CDH3P22223 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.84□□□□□ -2.54
CDH3P22223 AL021921.1-201ENST00000442774 93 ntBASIC-0.84□□□□□ -2.54
CDH3P22223 RNU7-171P-201ENST00000459581 62 ntBASIC-0.84□□□□□ -2.54
CDH3P22223 SCARNA17-201ENST00000516183 144 ntBASIC-0.84□□□□□ -2.54
CDH3P22223 AP002795.1-201ENST00000534879 84 ntBASIC-0.84□□□□□ -2.54
CDH3P22223 U2.7-201ENST00000619197 100 ntBASIC-0.84□□□□□ -2.54
CDH3P22223 RNU6-807P-201ENST00000516805 107 ntBASIC-0.85□□□□□ -2.55
CDH3P22223 RNU6-294P-201ENST00000364999 102 ntBASIC-0.86□□□□□ -2.55
CDH3P22223 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-0.86□□□□□ -2.55
CDH3P22223 MIR5582-201ENST00000579697 68 ntBASIC-0.86□□□□□ -2.55
CDH3P22223 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.86□□□□□ -2.55
CDH3P22223 MIR494-201ENST00000349529 81 ntBASIC-0.87□□□□□ -2.55
CDH3P22223 SNORD45.1-201ENST00000363181 77 ntBASIC-0.87□□□□□ -2.55
CDH3P22223 RNU6-380P-201ENST00000410207 107 ntBASIC-0.87□□□□□ -2.55
CDH3P22223 MIR378F-201ENST00000578143 78 ntBASIC-0.87□□□□□ -2.55
CDH3P22223 RNU6-246P-201ENST00000384702 107 ntBASIC-0.88□□□□□ -2.55
CDH3P22223 MIR450A2-201ENST00000385022 100 ntBASIC-0.88□□□□□ -2.55
CDH3P22223 RNU6-982P-201ENST00000516216 102 ntBASIC-0.88□□□□□ -2.55
CDH3P22223 MIR6738-201ENST00000619620 64 ntBASIC-0.89□□□□□ -2.55
CDH3P22223 RNA5SP26-201ENST00000362406 119 ntBASIC-0.9□□□□□ -2.55
CDH3P22223 Y_RNA.369-201ENST00000365568 117 ntBASIC-0.9□□□□□ -2.55
CDH3P22223 RNU6-10P-201ENST00000384036 107 ntBASIC-0.9□□□□□ -2.55
CDH3P22223 SNORD19-201ENST00000391191 68 ntBASIC-0.9□□□□□ -2.55
CDH3P22223 MIR8485-201ENST00000401372 91 ntBASIC-0.9□□□□□ -2.55
CDH3P22223 Y_RNA.313-201ENST00000365095 103 ntBASIC-0.91□□□□□ -2.56
CDH3P22223 MIR587-201ENST00000384845 96 ntBASIC-0.91□□□□□ -2.56
CDH3P22223 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-0.91□□□□□ -2.56
CDH3P22223 SNORA26.4-201ENST00000391188 123 ntBASIC-0.91□□□□□ -2.56
CDH3P22223 MIR4712-201ENST00000583750 82 ntBASIC-0.91□□□□□ -2.56
CDH3P22223 MIR1245B-201ENST00000636115 69 ntBASIC-0.91□□□□□ -2.56
CDH3P22223 RNU6-924P-201ENST00000362926 108 ntBASIC-0.92□□□□□ -2.56
CDH3P22223 RNU7-88P-201ENST00000458752 63 ntBASIC-0.92□□□□□ -2.56
CDH3P22223 MIR4324-201ENST00000584846 72 ntBASIC-0.92□□□□□ -2.56
CDH3P22223 RNU6-1094P-201ENST00000362416 104 ntBASIC-0.93□□□□□ -2.56
CDH3P22223 MIR548C-201ENST00000384815 97 ntBASIC-0.93□□□□□ -2.56
CDH3P22223 snoU83B.1-201ENST00000517136 88 ntBASIC-0.93□□□□□ -2.56
CDH3P22223 MIR6818-201ENST00000621576 65 ntBASIC-0.93□□□□□ -2.56
CDH3P22223 RNU6-1276P-201ENST00000365372 104 ntBASIC-0.94□□□□□ -2.56
CDH3P22223 RNU6-242P-201ENST00000384359 107 ntBASIC-0.94□□□□□ -2.56
CDH3P22223 U7.5-201ENST00000517224 61 ntBASIC-0.94□□□□□ -2.56
CDH3P22223 MIR664A-201ENST00000626086 82 ntBASIC-0.94□□□□□ -2.56
CDH3P22223 SNORD115-33-201ENST00000363723 82 ntBASIC-0.95□□□□□ -2.56
CDH3P22223 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.95□□□□□ -2.56
CDH3P22223 RNU7-174P-201ENST00000516248 59 ntBASIC-0.95□□□□□ -2.56
CDH3P22223 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.95□□□□□ -2.56
CDH3P22223 MIR1468-201ENST00000410600 86 ntBASIC-0.96□□□□□ -2.56
CDH3P22223 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.96□□□□□ -2.56
CDH3P22223 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.96□□□□□ -2.56
CDH3P22223 RNU6-1298P-201ENST00000362456 101 ntBASIC-0.97□□□□□ -2.56
CDH3P22223 Y_RNA.94-201ENST00000363068 106 ntBASIC-0.97□□□□□ -2.56
CDH3P22223 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.97□□□□□ -2.56
CDH3P22223 RNU6-732P-201ENST00000516033 103 ntBASIC-0.97□□□□□ -2.56
CDH3P22223 MIR4666B-201ENST00000578142 81 ntBASIC-0.97□□□□□ -2.56
CDH3P22223 MIR8053-201ENST00000613344 75 ntBASIC-0.97□□□□□ -2.56
CDH3P22223 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.98□□□□□ -2.57
CDH3P22223 MIR29B1-201ENST00000385015 81 ntBASIC-0.98□□□□□ -2.57
CDH3P22223 MIR889-201ENST00000401280 79 ntBASIC-0.98□□□□□ -2.57
CDH3P22223 AC062037.1-201ENST00000605302 128 ntBASIC-0.98□□□□□ -2.57
CDH3P22223 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.98□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 172.9 ms