Protein–RNA interactions for Protein: P13747

HLA-E, HLA class I histocompatibility antigen, alpha chain E, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-EP13747 Y_RNA.795-201ENST00000619475 112 ntBASIC-2.9□□□□□ -2.87
HLA-EP13747 Y_RNA.827-201ENST00000638104 112 ntBASIC-2.9□□□□□ -2.87
HLA-EP13747 RNU6-230P-201ENST00000362457 104 ntBASIC-2.91□□□□□ -2.88
HLA-EP13747 Y_RNA.459-201ENST00000384251 102 ntBASIC-2.91□□□□□ -2.88
HLA-EP13747 RNU6-1089P-201ENST00000516473 104 ntBASIC-2.91□□□□□ -2.88
HLA-EP13747 AL157777.2-201ENST00000258070 137 ntBASIC-2.92□□□□□ -2.88
HLA-EP13747 RNU6-247P-201ENST00000362636 107 ntBASIC-2.92□□□□□ -2.88
HLA-EP13747 Y_RNA.397-201ENST00000383950 98 ntBASIC-2.92□□□□□ -2.88
HLA-EP13747 Y_RNA.443-201ENST00000384135 111 ntBASIC-2.92□□□□□ -2.88
HLA-EP13747 Y_RNA.662-201ENST00000516028 97 ntBASIC-2.92□□□□□ -2.88
HLA-EP13747 RNU6-1023P-201ENST00000516137 106 ntBASIC-2.92□□□□□ -2.88
HLA-EP13747 Y_RNA.680-201ENST00000516441 93 ntBASIC-2.92□□□□□ -2.88
HLA-EP13747 RNU6-698P-201ENST00000363523 107 ntBASIC-2.93□□□□□ -2.88
HLA-EP13747 RNU6-34P-201ENST00000364874 107 ntBASIC-2.93□□□□□ -2.88
HLA-EP13747 SNORD116-18-201ENST00000383961 92 ntBASIC-2.93□□□□□ -2.88
HLA-EP13747 Y_RNA.649-201ENST00000459077 103 ntBASIC-2.93□□□□□ -2.88
HLA-EP13747 Y_RNA.699-201ENST00000516803 93 ntBASIC-2.93□□□□□ -2.88
HLA-EP13747 Y_RNA.47-201ENST00000362697 108 ntBASIC-2.94□□□□□ -2.88
HLA-EP13747 SNORA20.1-201ENST00000364790 130 ntBASIC-2.94□□□□□ -2.88
HLA-EP13747 MIR548AA1-201ENST00000384971 97 ntBASIC-2.94□□□□□ -2.88
HLA-EP13747 SCARNA23-201ENST00000516060 130 ntBASIC-2.94□□□□□ -2.88
HLA-EP13747 MIR548S-201ENST00000581352 82 ntBASIC-2.94□□□□□ -2.88
HLA-EP13747 U4.4-201ENST00000620626 117 ntBASIC-2.94□□□□□ -2.88
HLA-EP13747 Y_RNA.313-201ENST00000365095 103 ntBASIC-2.95□□□□□ -2.88
HLA-EP13747 Y_RNA.519-201ENST00000384553 102 ntBASIC-2.95□□□□□ -2.88
HLA-EP13747 RNU6-141P-201ENST00000410499 105 ntBASIC-2.95□□□□□ -2.88
HLA-EP13747 Y_RNA.264-201ENST00000364665 102 ntBASIC-2.96□□□□□ -2.88
HLA-EP13747 Y_RNA.580-201ENST00000391004 95 ntBASIC-2.96□□□□□ -2.88
HLA-EP13747 U6.97-201ENST00000636904 101 ntBASIC-2.96□□□□□ -2.88
HLA-EP13747 RNU6-1108P-201ENST00000516308 104 ntBASIC-2.97□□□□□ -2.88
HLA-EP13747 AC005520.4-201ENST00000604337 90 ntBASIC-2.97□□□□□ -2.88
HLA-EP13747 SNX3P1Y-201ENST00000615757 176 ntBASIC-2.97□□□□□ -2.88
HLA-EP13747 Y_RNA.668-201ENST00000516233 93 ntBASIC-2.98□□□□□ -2.89
HLA-EP13747 Y_RNA.149-201ENST00000363558 117 ntBASIC-2.99□□□□□ -2.89
HLA-EP13747 MIR569-201ENST00000385228 96 ntBASIC-2.99□□□□□ -2.89
HLA-EP13747 AL117187.1-201ENST00000555482 181 ntBASIC-2.99□□□□□ -2.89
HLA-EP13747 MIR548V-201ENST00000584165 80 ntBASIC-3□□□□□ -2.89
HLA-EP13747 Y_RNA.291-201ENST00000364886 113 ntBASIC-3.01□□□□□ -2.89
HLA-EP13747 Y_RNA.297-201ENST00000364950 91 ntBASIC-3.01□□□□□ -2.89
HLA-EP13747 RNU6-904P-201ENST00000516206 101 ntBASIC-3.01□□□□□ -2.89
HLA-EP13747 RNU6-1121P-201ENST00000516802 109 ntBASIC-3.01□□□□□ -2.89
HLA-EP13747 SNORD18C-201ENST00000362704 69 ntBASIC-3.02□□□□□ -2.89
HLA-EP13747 Y_RNA.349-201ENST00000365406 102 ntBASIC-3.02□□□□□ -2.89
HLA-EP13747 MTCYBP6-201ENST00000441810 138 ntBASIC-3.02□□□□□ -2.89
HLA-EP13747 RNU6-982P-201ENST00000516216 102 ntBASIC-3.02□□□□□ -2.89
HLA-EP13747 RNU6-574P-201ENST00000384265 107 ntBASIC-3.03□□□□□ -2.89
HLA-EP13747 RNU6-604P-201ENST00000390917 100 ntBASIC-3.03□□□□□ -2.89
HLA-EP13747 MIR3675-201ENST00000583661 73 ntBASIC-3.03□□□□□ -2.89
HLA-EP13747 RNU6-1081P-201ENST00000384537 107 ntBASIC-3.04□□□□□ -2.9
HLA-EP13747 MIR519C-201ENST00000385053 87 ntBASIC-3.04□□□□□ -2.9
HLA-EP13747 RNU7-120P-201ENST00000459334 63 ntBASIC-3.04□□□□□ -2.9
HLA-EP13747 RNU7-61P-201ENST00000515897 61 ntBASIC-3.04□□□□□ -2.9
HLA-EP13747 AC062037.2-201ENST00000610137 73 ntBASIC-3.04□□□□□ -2.9
HLA-EP13747 RNU6-694P-201ENST00000364071 147 ntBASIC-3.05□□□□□ -2.9
HLA-EP13747 SNORD116-16-201ENST00000384533 92 ntBASIC-3.05□□□□□ -2.9
HLA-EP13747 Y_RNA.535-201ENST00000384612 99 ntBASIC-3.05□□□□□ -2.9
HLA-EP13747 SNORA27.2-201ENST00000363365 126 ntBASIC-3.06□□□□□ -2.9
HLA-EP13747 Y_RNA.566-201ENST00000384735 101 ntBASIC-3.06□□□□□ -2.9
HLA-EP13747 RNU6-995P-201ENST00000391244 107 ntBASIC-3.06□□□□□ -2.9
HLA-EP13747 RNU6-330P-201ENST00000363015 107 ntBASIC-3.07□□□□□ -2.9
HLA-EP13747 Y_RNA.422-201ENST00000384054 114 ntBASIC-3.07□□□□□ -2.9
HLA-EP13747 SNORA8.1-201ENST00000384250 140 ntBASIC-3.07□□□□□ -2.9
HLA-EP13747 MIR630-201ENST00000384957 97 ntBASIC-3.07□□□□□ -2.9
HLA-EP13747 Y_RNA.59-201ENST00000362828 102 ntBASIC-3.08□□□□□ -2.9
HLA-EP13747 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-3.08□□□□□ -2.9
HLA-EP13747 SNORD113-2-201ENST00000391082 72 ntBASIC-3.08□□□□□ -2.9
HLA-EP13747 RNU6-394P-201ENST00000410735 107 ntBASIC-3.08□□□□□ -2.9
HLA-EP13747 SNORD33.1-201ENST00000516213 88 ntBASIC-3.08□□□□□ -2.9
HLA-EP13747 SNORD1B-201ENST00000363091 84 ntBASIC-3.09□□□□□ -2.9
HLA-EP13747 Y_RNA.281-201ENST00000364774 94 ntBASIC-3.09□□□□□ -2.9
HLA-EP13747 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-3.09□□□□□ -2.9
HLA-EP13747 MTRNR2L9-201ENST00000622562 75 ntBASIC-3.09□□□□□ -2.9
HLA-EP13747 Y_RNA.629-201ENST00000411368 105 ntBASIC-3.1□□□□□ -2.91
HLA-EP13747 MTND4LP9-201ENST00000427694 174 ntBASIC-3.1□□□□□ -2.91
HLA-EP13747 RNU7-107P-201ENST00000459121 61 ntBASIC-3.1□□□□□ -2.91
HLA-EP13747 RNU6-162P-201ENST00000516228 103 ntBASIC-3.1□□□□□ -2.91
HLA-EP13747 SNORD63.2-201ENST00000516303 64 ntBASIC-3.1□□□□□ -2.91
HLA-EP13747 SNORD113-3-201ENST00000364830 72 ntBASIC-3.11□□□□□ -2.91
HLA-EP13747 RNY3P8-201ENST00000411366 126 ntBASIC-3.11□□□□□ -2.91
HLA-EP13747 RNU6-426P-201ENST00000516464 97 ntBASIC-3.11□□□□□ -2.91
HLA-EP13747 AC044792.1-201ENST00000593294 196 ntBASIC-3.11□□□□□ -2.91
HLA-EP13747 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-3.11□□□□□ -2.91
HLA-EP13747 Y_RNA.8-201ENST00000362353 102 ntBASIC-3.12□□□□□ -2.91
HLA-EP13747 SNORD45.1-201ENST00000363181 77 ntBASIC-3.12□□□□□ -2.91
HLA-EP13747 SNORD115-37-201ENST00000363768 82 ntBASIC-3.12□□□□□ -2.91
HLA-EP13747 RNU6-1160P-201ENST00000384546 104 ntBASIC-3.12□□□□□ -2.91
HLA-EP13747 Y_RNA.586-201ENST00000391146 98 ntBASIC-3.12□□□□□ -2.91
HLA-EP13747 U7.3-201ENST00000616123 62 ntBASIC-3.12□□□□□ -2.91
HLA-EP13747 MIR3914-2-201ENST00000637339 95 ntBASIC-3.12□□□□□ -2.91
HLA-EP13747 MIRLET7A2-201ENST00000362105 72 ntBASIC-3.13□□□□□ -2.91
HLA-EP13747 RNY1P1-201ENST00000364372 112 ntBASIC-3.13□□□□□ -2.91
HLA-EP13747 RNU6-669P-201ENST00000365575 107 ntBASIC-3.13□□□□□ -2.91
HLA-EP13747 RNU6-804P-201ENST00000384286 107 ntBASIC-3.13□□□□□ -2.91
HLA-EP13747 MIR581-201ENST00000384895 96 ntBASIC-3.13□□□□□ -2.91
HLA-EP13747 MTND4LP1-201ENST00000446263 157 ntBASIC-3.13□□□□□ -2.91
HLA-EP13747 RNU7-151P-201ENST00000516930 53 ntBASIC-3.13□□□□□ -2.91
HLA-EP13747 RNA5SP215-201ENST00000363440 122 ntBASIC-3.14□□□□□ -2.91
HLA-EP13747 Y_RNA.398-201ENST00000383952 99 ntBASIC-3.14□□□□□ -2.91
HLA-EP13747 RNU6-303P-201ENST00000517091 106 ntBASIC-3.14□□□□□ -2.91
HLA-EP13747 RNU6-1079P-201ENST00000362861 110 ntBASIC-3.15□□□□□ -2.91
Retrieved 100 of 98,524 protein–RNA pairs in 168 ms