Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 RNU6-681P-201ENST00000364012 104 ntBASIC-1.35□□□□□ -2.63
SIX3O95343 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.35□□□□□ -2.63
SIX3O95343 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.35□□□□□ -2.63
SIX3O95343 SNORD115-37-201ENST00000363768 82 ntBASIC-1.36□□□□□ -2.63
SIX3O95343 RNU6-340P-201ENST00000364005 107 ntBASIC-1.36□□□□□ -2.63
SIX3O95343 SNORD115-27-201ENST00000364430 82 ntBASIC-1.36□□□□□ -2.63
SIX3O95343 RNU4-61P-201ENST00000411243 107 ntBASIC-1.36□□□□□ -2.63
SIX3O95343 MIR519C-201ENST00000385053 87 ntBASIC-1.37□□□□□ -2.63
SIX3O95343 SNORA26.4-201ENST00000391188 123 ntBASIC-1.37□□□□□ -2.63
SIX3O95343 MIR548M-201ENST00000408260 86 ntBASIC-1.37□□□□□ -2.63
SIX3O95343 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.37□□□□□ -2.63
SIX3O95343 RNU6-752P-201ENST00000516376 102 ntBASIC-1.37□□□□□ -2.63
SIX3O95343 RNU6-766P-201ENST00000362478 107 ntBASIC-1.38□□□□□ -2.63
SIX3O95343 MIR507-201ENST00000385234 94 ntBASIC-1.38□□□□□ -2.63
SIX3O95343 MIR3139-201ENST00000579145 76 ntBASIC-1.38□□□□□ -2.63
SIX3O95343 MIR6739-201ENST00000622461 75 ntBASIC-1.38□□□□□ -2.63
SIX3O95343 SNORD115-33-201ENST00000363723 82 ntBASIC-1.39□□□□□ -2.63
SIX3O95343 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.39□□□□□ -2.63
SIX3O95343 SNORD77.2-201ENST00000391045 68 ntBASIC-1.39□□□□□ -2.63
SIX3O95343 MIR8485-201ENST00000401372 91 ntBASIC-1.4□□□□□ -2.63
SIX3O95343 AL035461.1-201ENST00000421490 332 ntBASIC-1.4□□□□□ -2.63
SIX3O95343 AL021921.1-201ENST00000442774 93 ntBASIC-1.4□□□□□ -2.63
SIX3O95343 RNU7-154P-201ENST00000516194 62 ntBASIC-1.4□□□□□ -2.63
SIX3O95343 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.4□□□□□ -2.63
SIX3O95343 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.4□□□□□ -2.63
SIX3O95343 MIR2052-201ENST00000636055 55 ntBASIC-1.4□□□□□ -2.63
SIX3O95343 RNU6-834P-201ENST00000362367 110 ntBASIC-1.41□□□□□ -2.64
SIX3O95343 SNORD115-22-201ENST00000364456 82 ntBASIC-1.41□□□□□ -2.64
SIX3O95343 RNU6-81P-201ENST00000365608 104 ntBASIC-1.41□□□□□ -2.64
SIX3O95343 RNU6-1117P-201ENST00000384525 104 ntBASIC-1.41□□□□□ -2.64
SIX3O95343 MIR29B1-201ENST00000385015 81 ntBASIC-1.41□□□□□ -2.64
SIX3O95343 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.41□□□□□ -2.64
SIX3O95343 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.41□□□□□ -2.64
SIX3O95343 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.42□□□□□ -2.64
SIX3O95343 MT-TM-201ENST00000387377 68 ntBASIC-1.42□□□□□ -2.64
SIX3O95343 MIR548Q-201ENST00000408404 100 ntBASIC-1.43□□□□□ -2.64
SIX3O95343 RNU2-51P-201ENST00000410708 197 ntBASIC-1.43□□□□□ -2.64
SIX3O95343 AL353691.2-201ENST00000443795 59 ntBASIC-1.43□□□□□ -2.64
SIX3O95343 AL031737.1-201ENST00000450125 223 ntBASIC-1.43□□□□□ -2.64
SIX3O95343 U7.5-201ENST00000517224 61 ntBASIC-1.43□□□□□ -2.64
SIX3O95343 MIR6818-201ENST00000621576 65 ntBASIC-1.43□□□□□ -2.64
SIX3O95343 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.44□□□□□ -2.64
SIX3O95343 RNU6-1154P-201ENST00000391001 104 ntBASIC-1.44□□□□□ -2.64
SIX3O95343 RNU6-656P-201ENST00000516785 107 ntBASIC-1.44□□□□□ -2.64
SIX3O95343 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.45□□□□□ -2.64
SIX3O95343 MIR527-201ENST00000385244 85 ntBASIC-1.45□□□□□ -2.64
SIX3O95343 MTATP8P2-201ENST00000435212 202 ntBASIC-1.45□□□□□ -2.64
SIX3O95343 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.45□□□□□ -2.64
SIX3O95343 RNU6-589P-201ENST00000516485 107 ntBASIC-1.45□□□□□ -2.64
SIX3O95343 MIR548AG1-201ENST00000579932 66 ntBASIC-1.45□□□□□ -2.64
SIX3O95343 RNU6-22P-201ENST00000384355 107 ntBASIC-1.46□□□□□ -2.64
SIX3O95343 RNU6-1168P-201ENST00000390831 104 ntBASIC-1.46□□□□□ -2.64
SIX3O95343 RNU6-576P-201ENST00000390854 102 ntBASIC-1.46□□□□□ -2.64
SIX3O95343 MIR889-201ENST00000401280 79 ntBASIC-1.46□□□□□ -2.64
SIX3O95343 RPL35AP4-201ENST00000412007 102 ntBASIC-1.46□□□□□ -2.64
SIX3O95343 RNU6-313P-201ENST00000516317 112 ntBASIC-1.46□□□□□ -2.64
SIX3O95343 RNU6-645P-201ENST00000364649 106 ntBASIC-1.48□□□□□ -2.65
SIX3O95343 MT-TR-201ENST00000387439 65 ntBASIC-1.48□□□□□ -2.65
SIX3O95343 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.48□□□□□ -2.65
SIX3O95343 MIR4668-201ENST00000582284 70 ntBASIC-1.48□□□□□ -2.65
SIX3O95343 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.48□□□□□ -2.65
SIX3O95343 Y_RNA.709-201ENST00000516952 92 ntBASIC-1.49□□□□□ -2.65
SIX3O95343 MIR4490-201ENST00000582647 84 ntBASIC-1.49□□□□□ -2.65
SIX3O95343 U2.7-201ENST00000619197 100 ntBASIC-1.49□□□□□ -2.65
SIX3O95343 MIR450A1-201ENST00000362262 91 ntBASIC-1.5□□□□□ -2.65
SIX3O95343 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.5□□□□□ -2.65
SIX3O95343 AC093729.1-201ENST00000513074 128 ntBASIC-1.5□□□□□ -2.65
SIX3O95343 RNU6-330P-201ENST00000363015 107 ntBASIC-1.51□□□□□ -2.65
SIX3O95343 MIR6502-201ENST00000617296 76 ntBASIC-1.51□□□□□ -2.65
SIX3O95343 MIR5683-201ENST00000636514 76 ntBASIC-1.51□□□□□ -2.65
SIX3O95343 RNU6-633P-201ENST00000362612 103 ntBASIC-1.52□□□□□ -2.65
SIX3O95343 SNORD19-201ENST00000391191 68 ntBASIC-1.52□□□□□ -2.65
SIX3O95343 AP002795.1-201ENST00000534879 84 ntBASIC-1.52□□□□□ -2.65
SIX3O95343 RNA5SP26-201ENST00000362406 119 ntBASIC-1.53□□□□□ -2.65
SIX3O95343 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.53□□□□□ -2.65
SIX3O95343 MIR4520-1-201ENST00000582609 70 ntBASIC-1.53□□□□□ -2.65
SIX3O95343 MIR3675-201ENST00000583661 73 ntBASIC-1.53□□□□□ -2.65
SIX3O95343 SNORD116-22-201ENST00000384430 92 ntBASIC-1.54□□□□□ -2.66
SIX3O95343 RNU6-246P-201ENST00000384702 107 ntBASIC-1.54□□□□□ -2.66
SIX3O95343 SNORA40.13-201ENST00000516379 120 ntBASIC-1.54□□□□□ -2.66
SIX3O95343 RNU6-267P-201ENST00000516714 103 ntBASIC-1.54□□□□□ -2.66
SIX3O95343 SNORD45.1-201ENST00000363181 77 ntBASIC-1.55□□□□□ -2.66
SIX3O95343 RNU6-402P-201ENST00000410678 103 ntBASIC-1.55□□□□□ -2.66
SIX3O95343 RNU6-807P-201ENST00000516805 107 ntBASIC-1.55□□□□□ -2.66
SIX3O95343 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.55□□□□□ -2.66
SIX3O95343 RNU6-228P-201ENST00000362700 106 ntBASIC-1.56□□□□□ -2.66
SIX3O95343 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.56□□□□□ -2.66
SIX3O95343 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.57□□□□□ -2.66
SIX3O95343 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.57□□□□□ -2.66
SIX3O95343 RNU6-803P-201ENST00000516034 102 ntBASIC-1.57□□□□□ -2.66
SIX3O95343 RNU6-982P-201ENST00000516216 102 ntBASIC-1.57□□□□□ -2.66
SIX3O95343 MIR4484-201ENST00000582855 83 ntBASIC-1.57□□□□□ -2.66
SIX3O95343 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.57□□□□□ -2.66
SIX3O95343 MIR6874-201ENST00000635894 71 ntBASIC-1.57□□□□□ -2.66
SIX3O95343 MIR548V-201ENST00000584165 80 ntBASIC-1.58□□□□□ -2.66
SIX3O95343 RNU6-604P-201ENST00000390917 100 ntBASIC-1.59□□□□□ -2.66
SIX3O95343 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.59□□□□□ -2.66
SIX3O95343 RNU6-624P-201ENST00000363411 107 ntBASIC-1.6□□□□□ -2.67
SIX3O95343 Y_RNA.273-201ENST00000364703 102 ntBASIC-1.6□□□□□ -2.67
SIX3O95343 RNU6-458P-201ENST00000384179 107 ntBASIC-1.6□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms