Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.5□□□□□ -2.65
SEMA3DO95025 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.51□□□□□ -2.65
SEMA3DO95025 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.51□□□□□ -2.65
SEMA3DO95025 MT-TM-201ENST00000387377 68 ntBASIC-1.51□□□□□ -2.65
SEMA3DO95025 RNU6-681P-201ENST00000364012 104 ntBASIC-1.52□□□□□ -2.65
SEMA3DO95025 AL035461.1-201ENST00000421490 332 ntBASIC-1.52□□□□□ -2.65
SEMA3DO95025 MIR548AG1-201ENST00000579932 66 ntBASIC-1.52□□□□□ -2.65
SEMA3DO95025 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.52□□□□□ -2.65
SEMA3DO95025 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.53□□□□□ -2.65
SEMA3DO95025 SNORD77.2-201ENST00000391045 68 ntBASIC-1.53□□□□□ -2.65
SEMA3DO95025 RNU6-554P-201ENST00000410466 106 ntBASIC-1.53□□□□□ -2.65
SEMA3DO95025 RNU4-61P-201ENST00000411243 107 ntBASIC-1.53□□□□□ -2.65
SEMA3DO95025 AL353691.2-201ENST00000443795 59 ntBASIC-1.53□□□□□ -2.65
SEMA3DO95025 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.53□□□□□ -2.65
SEMA3DO95025 MIR6818-201ENST00000621576 65 ntBASIC-1.53□□□□□ -2.65
SEMA3DO95025 RNU6-106P-201ENST00000384405 107 ntBASIC-1.54□□□□□ -2.66
SEMA3DO95025 RNU7-88P-201ENST00000458752 63 ntBASIC-1.54□□□□□ -2.66
SEMA3DO95025 RNU6-656P-201ENST00000516785 107 ntBASIC-1.54□□□□□ -2.66
SEMA3DO95025 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.55□□□□□ -2.66
SEMA3DO95025 Y_RNA.261-201ENST00000364631 102 ntBASIC-1.55□□□□□ -2.66
SEMA3DO95025 SNORA19-201ENST00000384737 128 ntBASIC-1.55□□□□□ -2.66
SEMA3DO95025 MIR519C-201ENST00000385053 87 ntBASIC-1.55□□□□□ -2.66
SEMA3DO95025 MIR507-201ENST00000385234 94 ntBASIC-1.56□□□□□ -2.66
SEMA3DO95025 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.56□□□□□ -2.66
SEMA3DO95025 RNY4-201ENST00000516507 96 ntBASIC-1.56□□□□□ -2.66
SEMA3DO95025 U7.5-201ENST00000517224 61 ntBASIC-1.56□□□□□ -2.66
SEMA3DO95025 Y_RNA.818-201ENST00000618813 71 ntBASIC-1.56□□□□□ -2.66
SEMA3DO95025 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.57□□□□□ -2.66
SEMA3DO95025 RNU6-576P-201ENST00000390854 102 ntBASIC-1.57□□□□□ -2.66
SEMA3DO95025 RNU6-1191P-201ENST00000516799 107 ntBASIC-1.57□□□□□ -2.66
SEMA3DO95025 U2.7-201ENST00000619197 100 ntBASIC-1.57□□□□□ -2.66
SEMA3DO95025 MIR664B-201ENST00000626756 61 ntBASIC-1.57□□□□□ -2.66
SEMA3DO95025 RNA5SP26-201ENST00000362406 119 ntBASIC-1.58□□□□□ -2.66
SEMA3DO95025 RNU6-246P-201ENST00000384702 107 ntBASIC-1.58□□□□□ -2.66
SEMA3DO95025 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.59□□□□□ -2.66
SEMA3DO95025 AP002795.1-201ENST00000534879 84 ntBASIC-1.59□□□□□ -2.66
SEMA3DO95025 MIR3133-201ENST00000583157 78 ntBASIC-1.59□□□□□ -2.66
SEMA3DO95025 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.59□□□□□ -2.66
SEMA3DO95025 SNORD19-201ENST00000391191 68 ntBASIC-1.6□□□□□ -2.67
SEMA3DO95025 RNU6-794P-201ENST00000517261 64 ntBASIC-1.6□□□□□ -2.67
SEMA3DO95025 RNU6-645P-201ENST00000364649 106 ntBASIC-1.61□□□□□ -2.67
SEMA3DO95025 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.61□□□□□ -2.67
SEMA3DO95025 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.61□□□□□ -2.67
SEMA3DO95025 MIR548C-201ENST00000384815 97 ntBASIC-1.61□□□□□ -2.67
SEMA3DO95025 RNU6-807P-201ENST00000516805 107 ntBASIC-1.61□□□□□ -2.67
SEMA3DO95025 RNU6-774P-201ENST00000363238 107 ntBASIC-1.62□□□□□ -2.67
SEMA3DO95025 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.62□□□□□ -2.67
SEMA3DO95025 MIR5683-201ENST00000636514 76 ntBASIC-1.62□□□□□ -2.67
SEMA3DO95025 RNA5SP405-201ENST00000363059 114 ntBASIC-1.63□□□□□ -2.67
SEMA3DO95025 SNORD115-37-201ENST00000363768 82 ntBASIC-1.63□□□□□ -2.67
SEMA3DO95025 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.63□□□□□ -2.67
SEMA3DO95025 Y_RNA.703-201ENST00000516846 111 ntBASIC-1.63□□□□□ -2.67
SEMA3DO95025 RNU6-633P-201ENST00000362612 103 ntBASIC-1.64□□□□□ -2.67
SEMA3DO95025 RNU6-959P-201ENST00000384671 107 ntBASIC-1.64□□□□□ -2.67
SEMA3DO95025 MTATP8P2-201ENST00000435212 202 ntBASIC-1.64□□□□□ -2.67
SEMA3DO95025 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.64□□□□□ -2.67
SEMA3DO95025 MIR4490-201ENST00000582647 84 ntBASIC-1.64□□□□□ -2.67
SEMA3DO95025 RNU6-766P-201ENST00000362478 107 ntBASIC-1.65□□□□□ -2.67
SEMA3DO95025 MIR4668-201ENST00000582284 70 ntBASIC-1.65□□□□□ -2.67
SEMA3DO95025 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.65□□□□□ -2.67
SEMA3DO95025 AC008267.6-201ENST00000441664 139 ntBASIC-1.66□□□□□ -2.68
SEMA3DO95025 AL365222.1-201ENST00000614661 98 ntBASIC-1.66□□□□□ -2.68
SEMA3DO95025 RNU6-330P-201ENST00000363015 107 ntBASIC-1.67□□□□□ -2.68
SEMA3DO95025 RNU6-624P-201ENST00000363411 107 ntBASIC-1.67□□□□□ -2.68
SEMA3DO95025 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.67□□□□□ -2.68
SEMA3DO95025 RPL35AP4-201ENST00000412007 102 ntBASIC-1.67□□□□□ -2.68
SEMA3DO95025 AC093729.1-201ENST00000513074 128 ntBASIC-1.67□□□□□ -2.68
SEMA3DO95025 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.68□□□□□ -2.68
SEMA3DO95025 snosnR66.1-201ENST00000391095 99 ntBASIC-1.68□□□□□ -2.68
SEMA3DO95025 MIR548Q-201ENST00000408404 100 ntBASIC-1.68□□□□□ -2.68
SEMA3DO95025 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-1.68□□□□□ -2.68
SEMA3DO95025 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.69□□□□□ -2.68
SEMA3DO95025 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.69□□□□□ -2.68
SEMA3DO95025 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.69□□□□□ -2.68
SEMA3DO95025 RNU6-164P-201ENST00000364604 103 ntBASIC-1.69□□□□□ -2.68
SEMA3DO95025 RNU6-209P-201ENST00000384118 107 ntBASIC-1.69□□□□□ -2.68
SEMA3DO95025 RNU6-589P-201ENST00000516485 107 ntBASIC-1.69□□□□□ -2.68
SEMA3DO95025 RNU6-478P-201ENST00000363904 110 ntBASIC-1.7□□□□□ -2.68
SEMA3DO95025 MIR3675-201ENST00000583661 73 ntBASIC-1.7□□□□□ -2.68
SEMA3DO95025 RNU6-194P-201ENST00000363862 105 ntBASIC-1.71□□□□□ -2.68
SEMA3DO95025 RNU6-458P-201ENST00000384179 107 ntBASIC-1.71□□□□□ -2.68
SEMA3DO95025 AL078595.1-201ENST00000404458 226 ntBASIC-1.71□□□□□ -2.68
SEMA3DO95025 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.71□□□□□ -2.68
SEMA3DO95025 U6.58-201ENST00000613107 107 ntBASIC-1.71□□□□□ -2.68
SEMA3DO95025 AC090616.4-201ENST00000448026 115 ntBASIC-1.72□□□□□ -2.68
SEMA3DO95025 RNU7-174P-201ENST00000516248 59 ntBASIC-1.72□□□□□ -2.68
SEMA3DO95025 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.72□□□□□ -2.68
SEMA3DO95025 MIR2052-201ENST00000636055 55 ntBASIC-1.72□□□□□ -2.68
SEMA3DO95025 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-1.72□□□□□ -2.68
SEMA3DO95025 RNU6-982P-201ENST00000516216 102 ntBASIC-1.73□□□□□ -2.69
SEMA3DO95025 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.74□□□□□ -2.69
SEMA3DO95025 RNU6-1056P-201ENST00000383996 107 ntBASIC-1.74□□□□□ -2.69
SEMA3DO95025 SNORA8.1-201ENST00000384250 140 ntBASIC-1.74□□□□□ -2.69
SEMA3DO95025 RNU6-604P-201ENST00000390917 100 ntBASIC-1.74□□□□□ -2.69
SEMA3DO95025 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.74□□□□□ -2.69
SEMA3DO95025 RNU6-303P-201ENST00000517091 106 ntBASIC-1.74□□□□□ -2.69
SEMA3DO95025 MIR450A1-201ENST00000362262 91 ntBASIC-1.75□□□□□ -2.69
SEMA3DO95025 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.75□□□□□ -2.69
SEMA3DO95025 SNORD116-22-201ENST00000384430 92 ntBASIC-1.75□□□□□ -2.69
SEMA3DO95025 RNU6-219P-201ENST00000364728 107 ntBASIC-1.76□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms