Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 RNU6-974P-201ENST00000384099 108 ntBASIC0.81□□□□□ -2.28
PTCD1O75127 RNU6-1267P-201ENST00000410747 107 ntBASIC0.81□□□□□ -2.28
PTCD1O75127 RNU7-129P-201ENST00000516128 62 ntBASIC0.81□□□□□ -2.28
PTCD1O75127 MIR6888-201ENST00000621977 67 ntBASIC0.81□□□□□ -2.28
PTCD1O75127 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.8□□□□□ -2.28
PTCD1O75127 RNU7-88P-201ENST00000458752 63 ntBASIC0.8□□□□□ -2.28
PTCD1O75127 AC108676.2-201ENST00000605225 163 ntBASIC0.8□□□□□ -2.28
PTCD1O75127 MIR429-201ENST00000362106 83 ntBASIC0.79□□□□□ -2.28
PTCD1O75127 Y_RNA.30-201ENST00000362572 97 ntBASIC0.79□□□□□ -2.28
PTCD1O75127 MIR125B1-201ENST00000385236 88 ntBASIC0.79□□□□□ -2.28
PTCD1O75127 U7.5-201ENST00000517224 61 ntBASIC0.79□□□□□ -2.28
PTCD1O75127 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.78□□□□□ -2.28
PTCD1O75127 SCARNA11.2-201ENST00000517183 154 ntBASIC0.78□□□□□ -2.28
PTCD1O75127 uc_338.36-201ENST00000622331 158 ntBASIC0.78□□□□□ -2.28
PTCD1O75127 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.78□□□□□ -2.28
PTCD1O75127 RNU6-247P-201ENST00000362636 107 ntBASIC0.77□□□□□ -2.29
PTCD1O75127 Y_RNA.374-201ENST00000365606 101 ntBASIC0.77□□□□□ -2.29
PTCD1O75127 RNA5SP121-201ENST00000516537 101 ntBASIC0.77□□□□□ -2.29
PTCD1O75127 RNU7-160P-201ENST00000516660 62 ntBASIC0.77□□□□□ -2.29
PTCD1O75127 AC010487.4-201ENST00000637027 61 ntBASIC0.77□□□□□ -2.29
PTCD1O75127 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
PTCD1O75127 SNORD44.1-201ENST00000363202 61 ntBASIC0.75□□□□□ -2.29
PTCD1O75127 Y_RNA.139-201ENST00000363464 102 ntBASIC0.75□□□□□ -2.29
PTCD1O75127 MIR106A-201ENST00000384870 81 ntBASIC0.75□□□□□ -2.29
PTCD1O75127 MIR146A-201ENST00000385201 99 ntBASIC0.75□□□□□ -2.29
PTCD1O75127 RNU6-696P-201ENST00000390834 107 ntBASIC0.75□□□□□ -2.29
PTCD1O75127 MTRNR2L9-201ENST00000622562 75 ntBASIC0.75□□□□□ -2.29
PTCD1O75127 MIR103A1-201ENST00000362165 78 ntBASIC0.74□□□□□ -2.29
PTCD1O75127 SNORA68.3-201ENST00000515906 83 ntBASIC0.74□□□□□ -2.29
PTCD1O75127 RNU6-848P-201ENST00000515948 107 ntBASIC0.74□□□□□ -2.29
PTCD1O75127 RNU6-863P-201ENST00000515989 104 ntBASIC0.74□□□□□ -2.29
PTCD1O75127 RNU6-617P-201ENST00000516147 107 ntBASIC0.74□□□□□ -2.29
PTCD1O75127 RNU6-473P-201ENST00000516164 107 ntBASIC0.74□□□□□ -2.29
PTCD1O75127 RNU6-1049P-201ENST00000516414 107 ntBASIC0.74□□□□□ -2.29
PTCD1O75127 AL445584.3-201ENST00000617173 78 ntBASIC0.74□□□□□ -2.29
PTCD1O75127 MIR329-2-201ENST00000385029 84 ntBASIC0.73□□□□□ -2.29
PTCD1O75127 SNORD57-201ENST00000448188 72 ntBASIC0.73□□□□□ -2.29
PTCD1O75127 RNA5SP330-201ENST00000517096 96 ntBASIC0.73□□□□□ -2.29
PTCD1O75127 RNU6-1174P-201ENST00000517278 101 ntBASIC0.73□□□□□ -2.29
PTCD1O75127 MIR548AA1-201ENST00000384971 97 ntBASIC0.72□□□□□ -2.29
PTCD1O75127 Y_RNA.115-201ENST00000363272 98 ntBASIC0.71□□□□□ -2.3
PTCD1O75127 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.71□□□□□ -2.3
PTCD1O75127 AL451105.1-201ENST00000450005 189 ntBASIC0.71□□□□□ -2.3
PTCD1O75127 MIR548AL-201ENST00000578416 97 ntBASIC0.71□□□□□ -2.3
PTCD1O75127 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
PTCD1O75127 RNU6-127P-201ENST00000390897 107 ntBASIC0.7□□□□□ -2.3
PTCD1O75127 RNU6-1250P-201ENST00000391218 107 ntBASIC0.7□□□□□ -2.3
PTCD1O75127 MIR8068-201ENST00000618032 68 ntBASIC0.7□□□□□ -2.3
PTCD1O75127 MIR924-201ENST00000638017 53 ntBASIC0.7□□□□□ -2.3
PTCD1O75127 RNU6-828P-201ENST00000364876 107 ntBASIC0.69□□□□□ -2.3
PTCD1O75127 MIR5704-201ENST00000584029 77 ntBASIC0.69□□□□□ -2.3
PTCD1O75127 snoR1.1-201ENST00000628177 80 ntBASIC0.69□□□□□ -2.3
PTCD1O75127 AL391099.1-201ENST00000624635 187 ntBASIC0.68□□□□□ -2.3
PTCD1O75127 RNA5SP98-201ENST00000363158 137 ntBASIC0.67□□□□□ -2.3
PTCD1O75127 RNU6-995P-201ENST00000391244 107 ntBASIC0.67□□□□□ -2.3
PTCD1O75127 RNU7-55P-201ENST00000459426 62 ntBASIC0.67□□□□□ -2.3
PTCD1O75127 MIRLET7D-201ENST00000362263 87 ntBASIC0.66□□□□□ -2.3
PTCD1O75127 RNA5SP457-201ENST00000363657 124 ntBASIC0.66□□□□□ -2.3
PTCD1O75127 RNU6-815P-201ENST00000384080 113 ntBASIC0.66□□□□□ -2.3
PTCD1O75127 MIR29B1-201ENST00000385015 81 ntBASIC0.66□□□□□ -2.3
PTCD1O75127 MIR92A1-201ENST00000385233 78 ntBASIC0.66□□□□□ -2.3
PTCD1O75127 MIR548H2-201ENST00000408874 88 ntBASIC0.66□□□□□ -2.3
PTCD1O75127 MIR5087-201ENST00000635826 76 ntBASIC0.66□□□□□ -2.3
PTCD1O75127 RNU6-1008P-201ENST00000384160 104 ntBASIC0.65□□□□□ -2.31
PTCD1O75127 MIR643-201ENST00000385267 97 ntBASIC0.65□□□□□ -2.31
PTCD1O75127 AC108740.1-201ENST00000498629 225 ntBASIC0.65□□□□□ -2.31
PTCD1O75127 RNU6-258P-201ENST00000390884 101 ntBASIC0.64□□□□□ -2.31
PTCD1O75127 SNORD63.1-201ENST00000516178 80 ntBASIC0.64□□□□□ -2.31
PTCD1O75127 MIR3170-201ENST00000582699 77 ntBASIC0.64□□□□□ -2.31
PTCD1O75127 MIR8087-201ENST00000612745 78 ntBASIC0.64□□□□□ -2.31
PTCD1O75127 RNU6-724P-201ENST00000390958 105 ntBASIC0.63□□□□□ -2.31
PTCD1O75127 SNORD63.2-201ENST00000516303 64 ntBASIC0.63□□□□□ -2.31
PTCD1O75127 RNU6-973P-201ENST00000364690 107 ntBASIC0.62□□□□□ -2.31
PTCD1O75127 RNU6-742P-201ENST00000365289 107 ntBASIC0.62□□□□□ -2.31
PTCD1O75127 AC096531.1-201ENST00000419107 107 ntBASIC0.62□□□□□ -2.31
PTCD1O75127 AC114737.2-201ENST00000421583 173 ntBASIC0.62□□□□□ -2.31
PTCD1O75127 MIR6507-201ENST00000613630 70 ntBASIC0.62□□□□□ -2.31
PTCD1O75127 uc_338.17-201ENST00000619633 179 ntBASIC0.62□□□□□ -2.31
PTCD1O75127 MIR6514-201ENST00000622549 70 ntBASIC0.62□□□□□ -2.31
PTCD1O75127 RNA5SP62-201ENST00000363457 110 ntBASIC0.61□□□□□ -2.31
PTCD1O75127 MIR1197-201ENST00000408818 88 ntBASIC0.61□□□□□ -2.31
PTCD1O75127 RNU6-1133P-201ENST00000410963 100 ntBASIC0.61□□□□□ -2.31
PTCD1O75127 MIR330-201ENST00000362196 94 ntBASIC0.6□□□□□ -2.31
PTCD1O75127 MIR520D-201ENST00000385002 87 ntBASIC0.6□□□□□ -2.31
PTCD1O75127 RNU6-455P-201ENST00000384681 107 ntBASIC0.59□□□□□ -2.31
PTCD1O75127 RNU6-900P-201ENST00000384498 102 ntBASIC0.58□□□□□ -2.32
PTCD1O75127 MIR548H4-201ENST00000408689 111 ntBASIC0.58□□□□□ -2.32
PTCD1O75127 RNU6-732P-201ENST00000516033 103 ntBASIC0.58□□□□□ -2.32
PTCD1O75127 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.57□□□□□ -2.32
PTCD1O75127 SNORA62.4-201ENST00000365504 151 ntBASIC0.57□□□□□ -2.32
PTCD1O75127 SNORD56B-201ENST00000384713 71 ntBASIC0.57□□□□□ -2.32
PTCD1O75127 SNORD19-201ENST00000391191 68 ntBASIC0.57□□□□□ -2.32
PTCD1O75127 Y_RNA.613-201ENST00000410726 97 ntBASIC0.57□□□□□ -2.32
PTCD1O75127 RNU6-1238P-201ENST00000517215 102 ntBASIC0.57□□□□□ -2.32
PTCD1O75127 VTRNA1-3-201ENST00000365645 89 ntBASIC0.56□□□□□ -2.32
PTCD1O75127 RNA5SP163-201ENST00000410304 99 ntBASIC0.56□□□□□ -2.32
PTCD1O75127 SNORA42.1-201ENST00000363515 137 ntBASIC0.55□□□□□ -2.32
PTCD1O75127 MIR124-2-201ENST00000385081 109 ntBASIC0.55□□□□□ -2.32
PTCD1O75127 RNU6-530P-201ENST00000391180 107 ntBASIC0.55□□□□□ -2.32
PTCD1O75127 RNU6-721P-201ENST00000410155 105 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 200.7 ms