Protein–RNA interactions for Protein: O75056

SDC3, Syndecan-3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3O75056 MIR3675-201ENST00000583661 73 ntBASIC-1.11□□□□□ -2.59
SDC3O75056 RNU6-478P-201ENST00000363904 110 ntBASIC-1.12□□□□□ -2.59
SDC3O75056 RNU6-32P-201ENST00000383948 107 ntBASIC-1.12□□□□□ -2.59
SDC3O75056 RNU6-13P-201ENST00000384248 107 ntBASIC-1.12□□□□□ -2.59
SDC3O75056 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.12□□□□□ -2.59
SDC3O75056 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.12□□□□□ -2.59
SDC3O75056 RNU6-12P-201ENST00000384604 107 ntBASIC-1.12□□□□□ -2.59
SDC3O75056 RNU6-246P-201ENST00000384702 107 ntBASIC-1.12□□□□□ -2.59
SDC3O75056 RNU6-41P-201ENST00000384741 107 ntBASIC-1.12□□□□□ -2.59
SDC3O75056 SNX3P1X-201ENST00000414887 175 ntBASIC-1.12□□□□□ -2.59
SDC3O75056 RNU6-557P-201ENST00000516842 110 ntBASIC-1.12□□□□□ -2.59
SDC3O75056 U7.5-201ENST00000517224 61 ntBASIC-1.12□□□□□ -2.59
SDC3O75056 RNU6-686P-201ENST00000364839 107 ntBASIC-1.13□□□□□ -2.59
SDC3O75056 SNORD113-1-201ENST00000365321 69 ntBASIC-1.13□□□□□ -2.59
SDC3O75056 RNU6-732P-201ENST00000516033 103 ntBASIC-1.13□□□□□ -2.59
SDC3O75056 RNU6-982P-201ENST00000516216 102 ntBASIC-1.13□□□□□ -2.59
SDC3O75056 MIR4324-201ENST00000584846 72 ntBASIC-1.13□□□□□ -2.59
SDC3O75056 RNU6-147P-201ENST00000383983 107 ntBASIC-1.14□□□□□ -2.59
SDC3O75056 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.14□□□□□ -2.59
SDC3O75056 AL606753.1-201ENST00000427435 87 ntBASIC-1.14□□□□□ -2.59
SDC3O75056 AL353691.2-201ENST00000443795 59 ntBASIC-1.14□□□□□ -2.59
SDC3O75056 MIR378F-201ENST00000578143 78 ntBASIC-1.14□□□□□ -2.59
SDC3O75056 MIR4484-201ENST00000582855 83 ntBASIC-1.14□□□□□ -2.59
SDC3O75056 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.15□□□□□ -2.59
SDC3O75056 RNU6-129P-201ENST00000391022 107 ntBASIC-1.15□□□□□ -2.59
SDC3O75056 MIR4320-201ENST00000636981 65 ntBASIC-1.15□□□□□ -2.59
SDC3O75056 SNORD45.1-201ENST00000363181 77 ntBASIC-1.16□□□□□ -2.6
SDC3O75056 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.16□□□□□ -2.6
SDC3O75056 AC074348.1-201ENST00000426503 132 ntBASIC-1.16□□□□□ -2.6
SDC3O75056 RNU6-844P-201ENST00000517175 102 ntBASIC-1.16□□□□□ -2.6
SDC3O75056 RNU6-675P-201ENST00000384236 104 ntBASIC-1.17□□□□□ -2.6
SDC3O75056 SNORD20-201ENST00000384550 80 ntBASIC-1.17□□□□□ -2.6
SDC3O75056 MIR507-201ENST00000385234 94 ntBASIC-1.17□□□□□ -2.6
SDC3O75056 RNU7-134P-201ENST00000458997 64 ntBASIC-1.17□□□□□ -2.6
SDC3O75056 AP002795.1-201ENST00000534879 84 ntBASIC-1.17□□□□□ -2.6
SDC3O75056 AC006160.2-201ENST00000637708 154 ntBASIC-1.17□□□□□ -2.6
SDC3O75056 RNU7-174P-201ENST00000516248 59 ntBASIC-1.18□□□□□ -2.6
SDC3O75056 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.18□□□□□ -2.6
SDC3O75056 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.19□□□□□ -2.6
SDC3O75056 RNU6-1134P-201ENST00000365156 101 ntBASIC-1.19□□□□□ -2.6
SDC3O75056 RNU6-215P-201ENST00000365169 102 ntBASIC-1.19□□□□□ -2.6
SDC3O75056 SNORD19-201ENST00000391191 68 ntBASIC-1.19□□□□□ -2.6
SDC3O75056 RNU4-61P-201ENST00000411243 107 ntBASIC-1.19□□□□□ -2.6
SDC3O75056 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.19□□□□□ -2.6
SDC3O75056 MIR6818-201ENST00000621576 65 ntBASIC-1.19□□□□□ -2.6
SDC3O75056 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.2□□□□□ -2.6
SDC3O75056 Y_RNA.73-201ENST00000362910 113 ntBASIC-1.2□□□□□ -2.6
SDC3O75056 RNU6-458P-201ENST00000384179 107 ntBASIC-1.2□□□□□ -2.6
SDC3O75056 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.2□□□□□ -2.6
SDC3O75056 U6.58-201ENST00000613107 107 ntBASIC-1.2□□□□□ -2.6
SDC3O75056 Y_RNA.593-201ENST00000410292 98 ntBASIC-1.21□□□□□ -2.6
SDC3O75056 RNU6-919P-201ENST00000516731 104 ntBASIC-1.21□□□□□ -2.6
SDC3O75056 MIR5683-201ENST00000636514 76 ntBASIC-1.21□□□□□ -2.6
SDC3O75056 RNU6-1131P-201ENST00000364955 107 ntBASIC-1.22□□□□□ -2.6
SDC3O75056 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.22□□□□□ -2.6
SDC3O75056 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.22□□□□□ -2.6
SDC3O75056 MIR29B1-201ENST00000385015 81 ntBASIC-1.22□□□□□ -2.6
SDC3O75056 AL603908.1-201ENST00000406098 201 ntBASIC-1.22□□□□□ -2.6
SDC3O75056 MIR548Q-201ENST00000408404 100 ntBASIC-1.22□□□□□ -2.6
SDC3O75056 MIR548V-201ENST00000584165 80 ntBASIC-1.22□□□□□ -2.6
SDC3O75056 RNA5SP26-201ENST00000362406 119 ntBASIC-1.23□□□□□ -2.61
SDC3O75056 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.23□□□□□ -2.61
SDC3O75056 MIR1468-201ENST00000410600 86 ntBASIC-1.23□□□□□ -2.61
SDC3O75056 RPL35AP4-201ENST00000412007 102 ntBASIC-1.23□□□□□ -2.61
SDC3O75056 MIR4490-201ENST00000582647 84 ntBASIC-1.23□□□□□ -2.61
SDC3O75056 MIR4306-201ENST00000583390 91 ntBASIC-1.23□□□□□ -2.61
SDC3O75056 RNU6-44P-201ENST00000384045 107 ntBASIC-1.24□□□□□ -2.61
SDC3O75056 RNU6-49P-201ENST00000384256 107 ntBASIC-1.24□□□□□ -2.61
SDC3O75056 RNU6-24P-201ENST00000384440 107 ntBASIC-1.24□□□□□ -2.61
SDC3O75056 MIR527-201ENST00000385244 85 ntBASIC-1.24□□□□□ -2.61
SDC3O75056 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.24□□□□□ -2.61
SDC3O75056 MIR1297-201ENST00000637311 77 ntBASIC-1.24□□□□□ -2.61
SDC3O75056 MIR198-201ENST00000637333 62 ntBASIC-1.24□□□□□ -2.61
SDC3O75056 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.25□□□□□ -2.61
SDC3O75056 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.25□□□□□ -2.61
SDC3O75056 RNU6-576P-201ENST00000390854 102 ntBASIC-1.25□□□□□ -2.61
SDC3O75056 U4.4-201ENST00000620626 117 ntBASIC-1.25□□□□□ -2.61
SDC3O75056 MIR664A-201ENST00000626086 82 ntBASIC-1.25□□□□□ -2.61
SDC3O75056 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.26□□□□□ -2.61
SDC3O75056 RNU6-587P-201ENST00000391282 106 ntBASIC-1.26□□□□□ -2.61
SDC3O75056 RNU6-380P-201ENST00000410207 107 ntBASIC-1.26□□□□□ -2.61
SDC3O75056 Y_RNA.607-201ENST00000410597 98 ntBASIC-1.26□□□□□ -2.61
SDC3O75056 RNU6-168P-201ENST00000516189 101 ntBASIC-1.26□□□□□ -2.61
SDC3O75056 RNU6-698P-201ENST00000363523 107 ntBASIC-1.27□□□□□ -2.61
SDC3O75056 RNY1P1-201ENST00000364372 112 ntBASIC-1.27□□□□□ -2.61
SDC3O75056 RNU6-34P-201ENST00000364874 107 ntBASIC-1.27□□□□□ -2.61
SDC3O75056 MTND4LP1-201ENST00000446263 157 ntBASIC-1.27□□□□□ -2.61
SDC3O75056 IGLL4P-201ENST00000614590 133 ntBASIC-1.27□□□□□ -2.61
SDC3O75056 RNA5SP192-201ENST00000364404 120 ntBASIC-1.28□□□□□ -2.61
SDC3O75056 SNORD45A-201ENST00000384512 84 ntBASIC-1.28□□□□□ -2.61
SDC3O75056 MIR630-201ENST00000384957 97 ntBASIC-1.28□□□□□ -2.61
SDC3O75056 MIR601-201ENST00000385256 79 ntBASIC-1.28□□□□□ -2.61
SDC3O75056 RNU6-696P-201ENST00000390834 107 ntBASIC-1.28□□□□□ -2.61
SDC3O75056 RNA5SP89-201ENST00000410300 108 ntBASIC-1.28□□□□□ -2.61
SDC3O75056 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.28□□□□□ -2.61
SDC3O75056 SNORD113.1-201ENST00000363280 73 ntBASIC-1.29□□□□□ -2.62
SDC3O75056 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.29□□□□□ -2.62
SDC3O75056 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.29□□□□□ -2.62
SDC3O75056 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.29□□□□□ -2.62
SDC3O75056 MIR5588-201ENST00000581890 63 ntBASIC-1.29□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 252 ms