Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 CYP3A137P-201ENST00000562436 69 ntBASIC0.56□□□□□ -2.32
TRIM13O60858 uc_338.17-201ENST00000619633 179 ntBASIC0.56□□□□□ -2.32
TRIM13O60858 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.56□□□□□ -2.32
TRIM13O60858 Y_RNA.139-201ENST00000363464 102 ntBASIC0.55□□□□□ -2.32
TRIM13O60858 RNU6-127P-201ENST00000390897 107 ntBASIC0.55□□□□□ -2.32
TRIM13O60858 RNU7-88P-201ENST00000458752 63 ntBASIC0.55□□□□□ -2.32
TRIM13O60858 AL391099.1-201ENST00000624635 187 ntBASIC0.55□□□□□ -2.32
TRIM13O60858 Y_RNA.226-201ENST00000364337 114 ntBASIC0.54□□□□□ -2.32
TRIM13O60858 RNU6-973P-201ENST00000364690 107 ntBASIC0.54□□□□□ -2.32
TRIM13O60858 RNU6-986P-201ENST00000363133 102 ntBASIC0.53□□□□□ -2.32
TRIM13O60858 RNU6-1133P-201ENST00000410963 100 ntBASIC0.53□□□□□ -2.32
TRIM13O60858 SNORA68.3-201ENST00000515906 83 ntBASIC0.53□□□□□ -2.32
TRIM13O60858 SNORD63.1-201ENST00000516178 80 ntBASIC0.53□□□□□ -2.32
TRIM13O60858 uc_338.36-201ENST00000622331 158 ntBASIC0.53□□□□□ -2.32
TRIM13O60858 MTRNR2L9-201ENST00000622562 75 ntBASIC0.53□□□□□ -2.32
TRIM13O60858 MIR103A1-201ENST00000362165 78 ntBASIC0.52□□□□□ -2.33
TRIM13O60858 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
TRIM13O60858 AC096531.1-201ENST00000419107 107 ntBASIC0.52□□□□□ -2.33
TRIM13O60858 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.52□□□□□ -2.33
TRIM13O60858 RPS29P1-201ENST00000465274 159 ntBASIC0.52□□□□□ -2.33
TRIM13O60858 RNU6-900P-201ENST00000384498 102 ntBASIC0.51□□□□□ -2.33
TRIM13O60858 RNU6-974P-201ENST00000384099 108 ntBASIC0.5□□□□□ -2.33
TRIM13O60858 RNU6-1250P-201ENST00000391218 107 ntBASIC0.5□□□□□ -2.33
TRIM13O60858 Y_RNA.613-201ENST00000410726 97 ntBASIC0.5□□□□□ -2.33
TRIM13O60858 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.49□□□□□ -2.33
TRIM13O60858 MIRLET7D-201ENST00000362263 87 ntBASIC0.49□□□□□ -2.33
TRIM13O60858 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.49□□□□□ -2.33
TRIM13O60858 MIR548J-201ENST00000408833 112 ntBASIC0.49□□□□□ -2.33
TRIM13O60858 MIR3170-201ENST00000582699 77 ntBASIC0.49□□□□□ -2.33
TRIM13O60858 MIR151B-201ENST00000584249 96 ntBASIC0.49□□□□□ -2.33
TRIM13O60858 MIR6788-201ENST00000618842 66 ntBASIC0.49□□□□□ -2.33
TRIM13O60858 MIR6514-201ENST00000622549 70 ntBASIC0.49□□□□□ -2.33
TRIM13O60858 SNORD45.2-201ENST00000363552 72 ntBASIC0.48□□□□□ -2.33
TRIM13O60858 RNU6-815P-201ENST00000384080 113 ntBASIC0.48□□□□□ -2.33
TRIM13O60858 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.48□□□□□ -2.33
TRIM13O60858 CR383656.4-201ENST00000546909 122 ntBASIC0.48□□□□□ -2.33
TRIM13O60858 RNU6-455P-201ENST00000384681 107 ntBASIC0.47□□□□□ -2.33
TRIM13O60858 MIR29B1-201ENST00000385015 81 ntBASIC0.47□□□□□ -2.33
TRIM13O60858 RNU6-1223P-201ENST00000517124 104 ntBASIC0.47□□□□□ -2.33
TRIM13O60858 AC104408.1-201ENST00000605241 170 ntBASIC0.47□□□□□ -2.33
TRIM13O60858 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
TRIM13O60858 MIR148A-201ENST00000362215 68 ntBASIC0.46□□□□□ -2.34
TRIM13O60858 RNU6-1204P-201ENST00000363948 107 ntBASIC0.46□□□□□ -2.34
TRIM13O60858 MIR643-201ENST00000385267 97 ntBASIC0.46□□□□□ -2.34
TRIM13O60858 MIR548H2-201ENST00000408874 88 ntBASIC0.46□□□□□ -2.34
TRIM13O60858 SNORD63.2-201ENST00000516303 64 ntBASIC0.46□□□□□ -2.34
TRIM13O60858 MIR4714-201ENST00000580728 77 ntBASIC0.46□□□□□ -2.34
TRIM13O60858 RNU6-732P-201ENST00000516033 103 ntBASIC0.45□□□□□ -2.34
TRIM13O60858 MIR5000-201ENST00000577717 103 ntBASIC0.45□□□□□ -2.34
TRIM13O60858 MIR5704-201ENST00000584029 77 ntBASIC0.45□□□□□ -2.34
TRIM13O60858 MIR6507-201ENST00000613630 70 ntBASIC0.45□□□□□ -2.34
TRIM13O60858 RNA5SP62-201ENST00000363457 110 ntBASIC0.44□□□□□ -2.34
TRIM13O60858 RNA5SP499-201ENST00000363982 119 ntBASIC0.44□□□□□ -2.34
TRIM13O60858 RNU6-180P-201ENST00000516697 61 ntBASIC0.44□□□□□ -2.34
TRIM13O60858 RNU6-1238P-201ENST00000517215 102 ntBASIC0.44□□□□□ -2.34
TRIM13O60858 AC069113.3-201ENST00000521019 150 ntBASIC0.44□□□□□ -2.34
TRIM13O60858 MIR8068-201ENST00000618032 68 ntBASIC0.44□□□□□ -2.34
TRIM13O60858 MIR6515-201ENST00000619843 57 ntBASIC0.44□□□□□ -2.34
TRIM13O60858 MIR5087-201ENST00000635826 76 ntBASIC0.44□□□□□ -2.34
TRIM13O60858 AC090625.1-201ENST00000357130 210 ntBASIC0.43□□□□□ -2.34
TRIM13O60858 Y_RNA.321-201ENST00000365149 102 ntBASIC0.43□□□□□ -2.34
TRIM13O60858 MIR216A-201ENST00000385063 110 ntBASIC0.43□□□□□ -2.34
TRIM13O60858 RNU6-1111P-201ENST00000391118 107 ntBASIC0.43□□□□□ -2.34
TRIM13O60858 RNA5SP347-201ENST00000362445 119 ntBASIC0.42□□□□□ -2.34
TRIM13O60858 SNORA42.1-201ENST00000363515 137 ntBASIC0.42□□□□□ -2.34
TRIM13O60858 RNA5SP163-201ENST00000410304 99 ntBASIC0.42□□□□□ -2.34
TRIM13O60858 AC114737.2-201ENST00000421583 173 ntBASIC0.42□□□□□ -2.34
TRIM13O60858 MIR6854-201ENST00000614935 69 ntBASIC0.42□□□□□ -2.34
TRIM13O60858 Y_RNA.355-201ENST00000365462 98 ntBASIC0.41□□□□□ -2.34
TRIM13O60858 SNORD56B-201ENST00000384713 71 ntBASIC0.41□□□□□ -2.34
TRIM13O60858 MIR598-201ENST00000384868 97 ntBASIC0.4□□□□□ -2.35
TRIM13O60858 RNA5SP325-201ENST00000363756 130 ntBASIC0.39□□□□□ -2.35
TRIM13O60858 RNU6-742P-201ENST00000365289 107 ntBASIC0.39□□□□□ -2.35
TRIM13O60858 RNU6-258P-201ENST00000390884 101 ntBASIC0.39□□□□□ -2.35
TRIM13O60858 RNU6-724P-201ENST00000390958 105 ntBASIC0.39□□□□□ -2.35
TRIM13O60858 RNU6-530P-201ENST00000391180 107 ntBASIC0.39□□□□□ -2.35
TRIM13O60858 MIR892B-201ENST00000401279 77 ntBASIC0.39□□□□□ -2.35
TRIM13O60858 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.39□□□□□ -2.35
TRIM13O60858 RNU6-822P-201ENST00000362707 106 ntBASIC0.38□□□□□ -2.35
TRIM13O60858 RNU6-1327P-201ENST00000365302 105 ntBASIC0.38□□□□□ -2.35
TRIM13O60858 SNORA50A-201ENST00000384225 134 ntBASIC0.38□□□□□ -2.35
TRIM13O60858 MIR124-2-201ENST00000385081 109 ntBASIC0.38□□□□□ -2.35
TRIM13O60858 SNORD19-201ENST00000391191 68 ntBASIC0.38□□□□□ -2.35
TRIM13O60858 MIR548H4-201ENST00000408689 111 ntBASIC0.38□□□□□ -2.35
TRIM13O60858 RNU6-721P-201ENST00000410155 105 ntBASIC0.38□□□□□ -2.35
TRIM13O60858 AC244250.2-201ENST00000418731 148 ntBASIC0.38□□□□□ -2.35
TRIM13O60858 AC114755.3-201ENST00000481111 251 ntBASIC0.38□□□□□ -2.35
TRIM13O60858 RNU6-1233P-201ENST00000362922 102 ntBASIC0.37□□□□□ -2.35
TRIM13O60858 RNU6-901P-201ENST00000384593 106 ntBASIC0.37□□□□□ -2.35
TRIM13O60858 MIR520D-201ENST00000385002 87 ntBASIC0.37□□□□□ -2.35
TRIM13O60858 MIR1468-201ENST00000410600 86 ntBASIC0.37□□□□□ -2.35
TRIM13O60858 MIR548Q-201ENST00000408404 100 ntBASIC0.36□□□□□ -2.35
TRIM13O60858 MIR6513-201ENST00000621188 64 ntBASIC0.36□□□□□ -2.35
TRIM13O60858 MIR4743-201ENST00000584576 69 ntBASIC0.35□□□□□ -2.35
TRIM13O60858 AC022709.1-201ENST00000615967 87 ntBASIC0.35□□□□□ -2.35
TRIM13O60858 MIR7111-201ENST00000619751 72 ntBASIC0.35□□□□□ -2.35
TRIM13O60858 MIR4315-1-201ENST00000636800 73 ntBASIC0.35□□□□□ -2.35
TRIM13O60858 MIR4315-2-201ENST00000640925 73 ntBASIC0.35□□□□□ -2.35
TRIM13O60858 MIR655-201ENST00000362159 97 ntBASIC0.33□□□□□ -2.36
TRIM13O60858 SNORA27.2-201ENST00000363365 126 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 170.8 ms